RNA–Protein interactions for RNA: ENST00000508304.5

TRAPPC13-209, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-209ENST00000508304 OR9G9P0C7N8 305 aa3.31□□□□□ -1.88
TRAPPC13-209ENST00000508304 CCDC130P13994 396 aa3.31□□□□□ -1.88
TRAPPC13-209ENST00000508304 MYOGP15173 224 aa3.31□□□□□ -1.88
TRAPPC13-209ENST00000508304 UCP1P25874 307 aa3.31□□□□□ -1.88
TRAPPC13-209ENST00000508304 MAT2AP31153 395 aaKnown RBP3.31□□□□□ -1.88
TRAPPC13-209ENST00000508304 RDXP35241 583 aaKnown RBP3.31□□□□□ -1.88
TRAPPC13-209ENST00000508304 SAA4P35542 130 aa3.31□□□□□ -1.88
TRAPPC13-209ENST00000508304 BRCC3P46736 316 aa3.31□□□□□ -1.88
TRAPPC13-209ENST00000508304 NDST2P52849 883 aa3.31□□□□□ -1.88
TRAPPC13-209ENST00000508304 CCNA1P78396 465 aa3.31□□□□□ -1.88
TRAPPC13-209ENST00000508304 OTUD4Q01804 1114 aaKnown RBP3.31□□□□□ -1.88
TRAPPC13-209ENST00000508304 ZFP36L1Q07352 338 aaKnown RBP3.31□□□□□ -1.88
TRAPPC13-209ENST00000508304 RGS1Q08116 209 aa3.31□□□□□ -1.88
TRAPPC13-209ENST00000508304 RAB35Q15286 201 aa3.31□□□□□ -1.88
TRAPPC13-209ENST00000508304 CHI3L2Q15782 390 aa3.31□□□□□ -1.88
TRAPPC13-209ENST00000508304 SYPL1Q16563 259 aa3.31□□□□□ -1.88
TRAPPC13-209ENST00000508304 CNPY1Q3B7I2 92 aa3.31□□□□□ -1.88
TRAPPC13-209ENST00000508304 RNF212Q495C1 297 aa3.31□□□□□ -1.88
TRAPPC13-209ENST00000508304 LINC01620Q4KN68 170 aa3.31□□□□□ -1.88
TRAPPC13-209ENST00000508304 PRR5LQ6MZQ0 368 aa3.31□□□□□ -1.88
TRAPPC13-209ENST00000508304 ATRAIDQ6UW56 229 aa3.31□□□□□ -1.88
TRAPPC13-209ENST00000508304 BTNL3Q6UXE8 466 aa3.31□□□□□ -1.88
TRAPPC13-209ENST00000508304 Q6ZPB1 254 aaPredicted RBP3.31□□□□□ -1.88
TRAPPC13-209ENST00000508304 LANCL3Q6ZV70 420 aa3.31□□□□□ -1.88
TRAPPC13-209ENST00000508304 MOB2Q70IA6 237 aa3.31□□□□□ -1.88
TRAPPC13-209ENST00000508304 UTS2BQ765I0 119 aa3.31□□□□□ -1.88
TRAPPC13-209ENST00000508304 CCDC80Q76M96 950 aa3.31□□□□□ -1.88
TRAPPC13-209ENST00000508304 KCNMB4Q86W47 210 aa3.31□□□□□ -1.88
TRAPPC13-209ENST00000508304 RNF130Q86XS8 419 aa3.31□□□□□ -1.88
TRAPPC13-209ENST00000508304 MARCH9Q86YJ5 346 aa3.31□□□□□ -1.88
TRAPPC13-209ENST00000508304 CCDC50Q8IVM0 306 aa3.31□□□□□ -1.88
TRAPPC13-209ENST00000508304 BBS5Q8N3I7 341 aa3.31□□□□□ -1.88
TRAPPC13-209ENST00000508304 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.31□□□□□ -1.88
TRAPPC13-209ENST00000508304 CNIH3Q8TBE1 160 aa3.31□□□□□ -1.88
TRAPPC13-209ENST00000508304 CNOT6LQ96LI5 555 aaKnown RBP3.31□□□□□ -1.88
TRAPPC13-209ENST00000508304 TCEANC2Q96MN5 208 aa3.31□□□□□ -1.88
TRAPPC13-209ENST00000508304 RBM14Q96PK6 669 aaKnown RBP3.31□□□□□ -1.88
TRAPPC13-209ENST00000508304 RCHY1Q96PM5 261 aa3.31□□□□□ -1.88
TRAPPC13-209ENST00000508304 ATF6BQ99941 703 aa3.31□□□□□ -1.88
TRAPPC13-209ENST00000508304 C19orf43Q9BQ61 176 aa3.31□□□□□ -1.88
TRAPPC13-209ENST00000508304 NXF5Q9H1B4 397 aaKnown RBP3.31□□□□□ -1.88
TRAPPC13-209ENST00000508304 PNNQ9H307 717 aaKnown RBP3.31□□□□□ -1.88
TRAPPC13-209ENST00000508304 FN3KRPQ9HA64 309 aa3.31□□□□□ -1.88
TRAPPC13-209ENST00000508304 IL1RL2Q9HB29 575 aa3.31□□□□□ -1.88
TRAPPC13-209ENST00000508304 ESM1Q9NQ30 184 aa3.31□□□□□ -1.88
TRAPPC13-209ENST00000508304 UTP6Q9NYH9 597 aaKnown RBP3.31□□□□□ -1.88
TRAPPC13-209ENST00000508304 CIDEBQ9UHD4 219 aa3.31□□□□□ -1.88
TRAPPC13-209ENST00000508304 CRLS1Q9UJA2 301 aa3.31□□□□□ -1.88
TRAPPC13-209ENST00000508304 EIF3LQ9Y262 564 aaKnown RBP3.31□□□□□ -1.88
TRAPPC13-209ENST00000508304 GSTK1Q9Y2Q3 226 aa3.31□□□□□ -1.88
TRAPPC13-209ENST00000508304 CAB39Q9Y376 341 aaPredicted RBP3.31□□□□□ -1.88
TRAPPC13-209ENST00000508304 IGKV6D-21A0A0A0MT36 114 aa3.3□□□□□ -1.88
TRAPPC13-209ENST00000508304 GOLGA8OA6NCC3 632 aa3.3□□□□□ -1.88
TRAPPC13-209ENST00000508304 MFSD2BA6NFX1 497 aa3.3□□□□□ -1.88
TRAPPC13-209ENST00000508304 GOLGA8NF8WBI6 632 aa3.3□□□□□ -1.88
TRAPPC13-209ENST00000508304 H0YC42 278 aa3.3□□□□□ -1.88
TRAPPC13-209ENST00000508304 K7EQD1 137 aa3.3□□□□□ -1.88
TRAPPC13-209ENST00000508304 PDHXO00330 501 aa3.3□□□□□ -1.88
TRAPPC13-209ENST00000508304 TRAFD1O14545 582 aaPredicted RBP3.3□□□□□ -1.88
TRAPPC13-209ENST00000508304 CTAGE5O15320 804 aa3.3□□□□□ -1.88
TRAPPC13-209ENST00000508304 PPIHO43447 177 aaKnown RBP3.3□□□□□ -1.88
TRAPPC13-209ENST00000508304 MED7O43513 233 aa3.3□□□□□ -1.88
TRAPPC13-209ENST00000508304 HPP00738 406 aa3.3□□□□□ -1.88
TRAPPC13-209ENST00000508304 OAS1P00973 400 aaKnown RBP3.3□□□□□ -1.88
TRAPPC13-209ENST00000508304 FCGR3AP08637 254 aa3.3□□□□□ -1.88
TRAPPC13-209ENST00000508304 IGFBP1P08833 259 aaPredicted RBP3.3□□□□□ -1.88
TRAPPC13-209ENST00000508304 PNMTP11086 282 aa3.3□□□□□ -1.88
TRAPPC13-209ENST00000508304 GNPDA1P46926 289 aa3.3□□□□□ -1.88
TRAPPC13-209ENST00000508304 ATP5OP48047 213 aa3.3□□□□□ -1.88
TRAPPC13-209ENST00000508304 RIDAP52758 137 aaKnown RBP3.3□□□□□ -1.88
TRAPPC13-209ENST00000508304 BDH1Q02338 343 aa3.3□□□□□ -1.88
TRAPPC13-209ENST00000508304 MAP2K1Q02750 393 aaPredicted RBP3.3□□□□□ -1.88
TRAPPC13-209ENST00000508304 HSP90AB3PQ58FF7 597 aa3.3□□□□□ -1.88
TRAPPC13-209ENST00000508304 MUC21Q5SSG8 566 aa3.3□□□□□ -1.88
TRAPPC13-209ENST00000508304 FAM182AQ5T1J6 154 aa3.3□□□□□ -1.88
TRAPPC13-209ENST00000508304 TAF3Q5VWG9 929 aa3.3□□□□□ -1.88
TRAPPC13-209ENST00000508304 LEG1Q6P5S2 330 aa3.3□□□□□ -1.88
TRAPPC13-209ENST00000508304 C3P1Q6ZMU1 363 aa3.3□□□□□ -1.88
TRAPPC13-209ENST00000508304 PARGQ86W56 976 aa3.3□□□□□ -1.88
TRAPPC13-209ENST00000508304 VSTM4Q8IW00 320 aa3.3□□□□□ -1.88
TRAPPC13-209ENST00000508304 TTC5Q8N0Z6 440 aa3.3□□□□□ -1.88
TRAPPC13-209ENST00000508304 SLC34A3Q8N130 599 aa3.3□□□□□ -1.88
TRAPPC13-209ENST00000508304 TMEM123Q8N131 208 aa3.3□□□□□ -1.88
TRAPPC13-209ENST00000508304 LRRC43Q8N309 656 aa3.3□□□□□ -1.88
TRAPPC13-209ENST00000508304 ZNF781Q8N8C0 355 aa3.3□□□□□ -1.88
TRAPPC13-209ENST00000508304 Q8N9G6 341 aaPredicted RBP3.3□□□□□ -1.88
TRAPPC13-209ENST00000508304 ZSCAN4Q8NAM6 433 aaPredicted RBP3.3□□□□□ -1.88
TRAPPC13-209ENST00000508304 BBOF1Q8ND07 529 aa3.3□□□□□ -1.88
TRAPPC13-209ENST00000508304 OR8J1Q8NGP2 316 aa3.3□□□□□ -1.88
TRAPPC13-209ENST00000508304 RPL3LQ92901 407 aaKnown RBP3.3□□□□□ -1.88
TRAPPC13-209ENST00000508304 EMG1Q92979 244 aaKnown RBP3.3□□□□□ -1.88
TRAPPC13-209ENST00000508304 C18orf25Q96B23 403 aaPredicted RBP3.3□□□□□ -1.88
TRAPPC13-209ENST00000508304 BIRC7Q96CA5 298 aa3.3□□□□□ -1.88
TRAPPC13-209ENST00000508304 SLC41A3Q96GZ6 507 aa3.3□□□□□ -1.88
TRAPPC13-209ENST00000508304 SH3YL1Q96HL8 342 aaPredicted RBP3.3□□□□□ -1.88
TRAPPC13-209ENST00000508304 ZNF597Q96LX8 424 aa3.3□□□□□ -1.88
TRAPPC13-209ENST00000508304 CASD1Q96PB1 797 aa3.3□□□□□ -1.88
TRAPPC13-209ENST00000508304 CCNL2Q96S94 520 aaPredicted RBP3.3□□□□□ -1.88
TRAPPC13-209ENST00000508304 COMMD4Q9H0A8 199 aa3.3□□□□□ -1.88
TRAPPC13-209ENST00000508304 SLC25A51Q9H1U9 297 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms