RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 CHST10O43529 356 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 LCMT2O60294 686 aaKnown RBP2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 NPHP4O75161 1426 aaPredicted RBP2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 CREG1O75629 220 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 ZMPSTE24O75844 475 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 CELF2O95319 508 aaKnown RBP2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 CTDNEP1O95476 244 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 LCATP04180 440 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 CFIP05156 583 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 C2P06681 752 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 CHRM2P08172 466 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 ATXN1LP0C7T5 689 aaKnown RBP2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 EFNA1P20827 205 aaPredicted RBP2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 UBA1P22314 1058 aaKnown RBP2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 GCAP28676 217 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 S100A11P31949 105 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 ID1P41134 155 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 RAB2AP61019 212 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 ABCE1P61221 599 aaKnown RBP2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 MAGOHP61326 146 aaKnown RBP2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 PKIAP61925 76 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 RPL23AP62750 156 aaKnown RBP2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 SLC7A9P82251 487 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 TLE4Q04727 773 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 MZT1Q08AG7 82 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 INCA1Q0VD86 236 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 RUNX2Q13950 521 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 OR4D1Q15615 310 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 PSG3Q16557 428 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 PCK2Q16822 640 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 ZNF630Q2M218 657 aaPredicted RBP2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 ZXDCQ2QGD7 858 aaPredicted RBP2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 KHDC1Q4VXA5 237 aaKnown RBP2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 SBK1Q52WX2 424 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 MFSD14BQ5SR56 506 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 C9orf50Q5SZB4 431 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 SPOUT1Q5T280 376 aaKnown RBP2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 TSTD2Q5T7W7 516 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 LPCAT4Q643R3 524 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 LEMD1Q68G75 181 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 REP15Q6BDI9 236 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 ZNF836Q6ZNA1 936 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 LINGO2Q7L985 606 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 GALNT10Q86SR1 603 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 LDB1Q86U70 411 aaPredicted RBP2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 CARM1Q86X55 608 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 CACUL1Q86Y37 369 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 RAB43Q86YS6 212 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 DCUN1D3Q8IWE4 304 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 ZNF34Q8IZ26 560 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 DNAAF1Q8NEP3 725 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 OR10W1Q8NGF6 305 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 GRAPLQ8TC17 118 aaPredicted RBP2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 BLOC1S5Q8TDH9 187 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 PTPRUQ92729 1446 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 RBPMSQ93062 196 aaKnown RBP2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 ZNF778Q96MU6 729 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 SLC46A1Q96NT5 459 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 TRIB1Q96RU8 372 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 CMKLR1Q99788 373 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 PRMT1Q99873 361 aaKnown RBP2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 EBF4Q9BQW3 602 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 VPS25Q9BRG1 176 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 FEM1AQ9BSK4 669 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 SRRQ9GZT4 340 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 ZNF350Q9GZX5 532 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 CHST8Q9H2A9 424 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 ANKRA2Q9H9E1 313 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 NMNAT1Q9HAN9 279 aaPredicted RBP2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 SEMA4BQ9NPR2 832 aaPredicted RBP2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 USE1Q9NZ43 259 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 ADA2Q9NZK5 511 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 PAK5Q9P286 719 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 DKK4Q9UBT3 224 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 OR12D3Q9UGF7 316 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 CRLS1Q9UJA2 301 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 OSGIN1Q9UJX0 560 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 IKZF3Q9UKT9 509 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 SLC7A11Q9UPY5 501 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 CNTN6Q9UQ52 1028 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 DRG1Q9Y295 367 aaKnown RBP2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 PEX16Q9Y5Y5 336 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 NPTNQ9Y639 398 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 ALG6Q9Y672 507 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 CLIC4Q9Y696 253 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 PNPLA7Q6ZV29 1317 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 A0A1B0GTW7 788 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 DFFAO00273 331 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 BHLHE40O14503 412 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 SIGLEC5O15389 551 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 KRT33AO76009 404 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 HOXC6P09630 235 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 NPSP0C0P6 89 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 SCGB1A1P11684 91 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 CEACAM1P13688 526 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 ZNF30P17039 623 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 ITGA3P26006 1051 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 CD27P26842 260 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 ARR3P36575 388 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 MMP12P39900 470 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms