RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 SFXN5Q8TD22 340 aa30.03■■■□□ 2.4
CBX4-203ENST00000494546 ADAMTS15Q8TE58 950 aa30.03■■■□□ 2.4
CBX4-203ENST00000494546 WNT2BQ93097 391 aa30.03■■■□□ 2.4
CBX4-203ENST00000494546 DPY30Q9C005 99 aa30.03■■■□□ 2.4
CBX4-203ENST00000494546 UBQLN4Q9NRR5 601 aa30.03■■■□□ 2.4
CBX4-203ENST00000494546 CLCF1Q9UBD9 225 aa30.03■■■□□ 2.4
CBX4-203ENST00000494546 ZNF337Q9Y3M9 751 aa30.03■■■□□ 2.4
CBX4-203ENST00000494546 L3MBTL1Q9Y468 752 aa30.03■■■□□ 2.4
CBX4-203ENST00000494546 DCHS2Q6V1P9 2916 aa30.02■■■□□ 2.4
CBX4-203ENST00000494546 SYT5O00445 386 aa30.02■■■□□ 2.4
CBX4-203ENST00000494546 MAGOHP61326 146 aaKnown RBP30.02■■■□□ 2.4
CBX4-203ENST00000494546 CHMP1BQ7LBR1 199 aa30.02■■■□□ 2.4
CBX4-203ENST00000494546 GRAMD2AQ8IUY3 354 aa30.02■■■□□ 2.4
CBX4-203ENST00000494546 MOAP1Q96BY2 351 aa30.02■■■□□ 2.4
CBX4-203ENST00000494546 UCN2Q96RP3 112 aa30.02■■■□□ 2.4
CBX4-203ENST00000494546 SH3GL2Q99962 352 aa30.02■■■□□ 2.4
CBX4-203ENST00000494546 PIGQQ9BRB3 760 aa30.02■■■□□ 2.4
CBX4-203ENST00000494546 GPATCH2Q9NW75 528 aa30.02■■■□□ 2.4
CBX4-203ENST00000494546 GIN1Q9NXP7 522 aa30.02■■■□□ 2.4
CBX4-203ENST00000494546 OR2M5A3KFT3 312 aa30.01■■■□□ 2.39
CBX4-203ENST00000494546 EEF1E1-BLOC1S5C9J1V9 151 aa30.01■■■□□ 2.39
CBX4-203ENST00000494546 H3BML4 177 aa30.01■■■□□ 2.39
CBX4-203ENST00000494546 EEF1E1O43324 174 aaKnown RBP30.01■■■□□ 2.39
CBX4-203ENST00000494546 KRT16P08779 473 aa30.01■■■□□ 2.39
CBX4-203ENST00000494546 LBPP18428 481 aa30.01■■■□□ 2.39
CBX4-203ENST00000494546 LCN1P31025 176 aa30.01■■■□□ 2.39
CBX4-203ENST00000494546 FOXF2Q12947 444 aa30.01■■■□□ 2.39
CBX4-203ENST00000494546 CLECL1Q8IZS7 167 aa30.01■■■□□ 2.39
CBX4-203ENST00000494546 MEIOBQ8N635 442 aa30.01■■■□□ 2.39
CBX4-203ENST00000494546 RNASE6Q93091 150 aaKnown RBP30.01■■■□□ 2.39
CBX4-203ENST00000494546 INTS12Q96CB8 462 aaKnown RBP30.01■■■□□ 2.39
CBX4-203ENST00000494546 SCDO00767 359 aa30■■■□□ 2.39
CBX4-203ENST00000494546 SEC14L5O43304 696 aa30■■■□□ 2.39
CBX4-203ENST00000494546 RCBTB2O95199 551 aa30■■■□□ 2.39
CBX4-203ENST00000494546 IL18BPO95998 194 aa30■■■□□ 2.39
CBX4-203ENST00000494546 ATP6V1C1P21283 382 aa30■■■□□ 2.39
CBX4-203ENST00000494546 GOT1L1Q8NHS2 421 aaPredicted RBP30■■■□□ 2.39
CBX4-203ENST00000494546 ZFP3Q96NJ6 502 aa30■■■□□ 2.39
CBX4-203ENST00000494546 MEAF6Q9HAF1 191 aa30■■■□□ 2.39
CBX4-203ENST00000494546 TMBIM4Q9HC24 238 aa30■■■□□ 2.39
CBX4-203ENST00000494546 HHATLQ9HCP6 504 aa30■■■□□ 2.39
CBX4-203ENST00000494546 VDAC3Q9Y277 283 aa30■■■□□ 2.39
CBX4-203ENST00000494546 KCNE3Q9Y6H6 103 aa30■■■□□ 2.39
CBX4-203ENST00000494546 SHISA8B8ZZ34 492 aa29.99■■■□□ 2.39
CBX4-203ENST00000494546 LINC01387J3KSC0 135 aa29.99■■■□□ 2.39
CBX4-203ENST00000494546 FBXL19-AS1Q494R0 122 aa29.99■■■□□ 2.39
CBX4-203ENST00000494546 GLYR1Q49A26 553 aaPredicted RBP29.99■■■□□ 2.39
CBX4-203ENST00000494546 BHLHB9Q6PI77 547 aa29.99■■■□□ 2.39
CBX4-203ENST00000494546 P4HA3Q7Z4N8 544 aa29.99■■■□□ 2.39
CBX4-203ENST00000494546 GCNT2Q8N0V5 402 aa29.99■■■□□ 2.39
CBX4-203ENST00000494546 SMPDL3BQ92485 455 aa29.99■■■□□ 2.39
CBX4-203ENST00000494546 SH3YL1Q96HL8 342 aaPredicted RBP29.99■■■□□ 2.39
CBX4-203ENST00000494546 NKIRAS1Q9NYS0 192 aa29.99■■■□□ 2.39
CBX4-203ENST00000494546 H0YC42 278 aa29.98■■■□□ 2.39
CBX4-203ENST00000494546 KIR2DL3P43628 341 aa29.98■■■□□ 2.39
CBX4-203ENST00000494546 SUCLG1P53597 346 aaKnown RBP29.98■■■□□ 2.39
CBX4-203ENST00000494546 TPD52P55327 224 aaPredicted RBP29.98■■■□□ 2.39
CBX4-203ENST00000494546 DCST2Q5T1A1 773 aa29.98■■■□□ 2.39
CBX4-203ENST00000494546 TMEM200AQ86VY9 491 aa29.98■■■□□ 2.39
CBX4-203ENST00000494546 ZZZ3Q8IYH5 903 aa29.98■■■□□ 2.39
CBX4-203ENST00000494546 OR8J2Q8NGG1 315 aa29.98■■■□□ 2.39
CBX4-203ENST00000494546 OR7D2Q96RA2 312 aa29.98■■■□□ 2.39
CBX4-203ENST00000494546 SFXN3Q9BWM7 321 aa29.98■■■□□ 2.39
CBX4-203ENST00000494546 THAP1Q9NVV9 213 aa29.98■■■□□ 2.39
CBX4-203ENST00000494546 DOCK7Q96N67 2140 aa29.98■■■□□ 2.39
CBX4-203ENST00000494546 MYO9AB2RTY4 2548 aa29.97■■■□□ 2.39
CBX4-203ENST00000494546 RNASET2O00584 256 aaKnown RBP29.97■■■□□ 2.39
CBX4-203ENST00000494546 HCRTR2O43614 444 aa29.97■■■□□ 2.39
CBX4-203ENST00000494546 TGM6O95932 706 aa29.97■■■□□ 2.39
CBX4-203ENST00000494546 CAPN3P20807 821 aa29.97■■■□□ 2.39
CBX4-203ENST00000494546 EEFSECP57772 596 aaKnown RBP29.97■■■□□ 2.39
CBX4-203ENST00000494546 RPS26P62854 115 aaKnown RBP29.97■■■□□ 2.39
CBX4-203ENST00000494546 MISPQ8IVT2 679 aa29.97■■■□□ 2.39
CBX4-203ENST00000494546 LRRC34Q8IZ02 419 aa29.97■■■□□ 2.39
CBX4-203ENST00000494546 CLEC4FQ8N1N0 589 aa29.97■■■□□ 2.39
CBX4-203ENST00000494546 OR5D16Q8NGK9 328 aa29.97■■■□□ 2.39
CBX4-203ENST00000494546 OR4A15Q8NGL6 344 aa29.97■■■□□ 2.39
CBX4-203ENST00000494546 TLCD1Q96CP7 247 aa29.97■■■□□ 2.39
CBX4-203ENST00000494546 ACBD3Q9H3P7 528 aa29.97■■■□□ 2.39
CBX4-203ENST00000494546 MARCOQ9UEW3 520 aaPredicted RBP29.97■■■□□ 2.39
CBX4-203ENST00000494546 FOXD3Q9UJU5 478 aaPredicted RBP29.97■■■□□ 2.39
CBX4-203ENST00000494546 PCDHGB4Q9UN71 923 aa29.97■■■□□ 2.39
CBX4-203ENST00000494546 PCNX3Q9H6A9 2034 aa29.96■■■□□ 2.39
CBX4-203ENST00000494546 NPIPA5A0A0B4J1W7 369 aa29.96■■■□□ 2.39
CBX4-203ENST00000494546 SLC22A20A6NK97 555 aa29.96■■■□□ 2.39
CBX4-203ENST00000494546 NPIPA7E9PJI5 369 aa29.96■■■□□ 2.39
CBX4-203ENST00000494546 SOX30O94993 753 aa29.96■■■□□ 2.39
CBX4-203ENST00000494546 NPIPA8P0DM63 369 aa29.96■■■□□ 2.39
CBX4-203ENST00000494546 PEX19P40855 299 aa29.96■■■□□ 2.39
CBX4-203ENST00000494546 SLC18A1P54219 525 aa29.96■■■□□ 2.39
CBX4-203ENST00000494546 CLDN15P56746 228 aa29.96■■■□□ 2.39
CBX4-203ENST00000494546 CLDN20P56880 219 aa29.96■■■□□ 2.39
CBX4-203ENST00000494546 CD226Q15762 336 aa29.96■■■□□ 2.39
CBX4-203ENST00000494546 ANKRD46Q86W74 232 aa29.96■■■□□ 2.39
CBX4-203ENST00000494546 RNF103-CHMP3A0A140T963 221 aa29.95■■■□□ 2.39
CBX4-203ENST00000494546 A0A1W2PQD3 144 aa29.95■■■□□ 2.39
CBX4-203ENST00000494546 SDHDO14521 159 aa29.95■■■□□ 2.39
CBX4-203ENST00000494546 ANKRD28O15084 1053 aa29.95■■■□□ 2.39
CBX4-203ENST00000494546 SNNO75324 88 aaPredicted RBP29.95■■■□□ 2.39
CBX4-203ENST00000494546 KITP10721 976 aa29.95■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms