RNA–Protein interactions for RNA: ENST00000482013.1

GGPS1-205, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 4

Gene GGPS1, Length 470 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-205ENST00000482013 DTX4Q9Y2E6 619 aa10.82□□□□□ -0.68
GGPS1-205ENST00000482013 PCDHGB1Q9Y5G3 927 aa10.82□□□□□ -0.68
GGPS1-205ENST00000482013 FER1L5A0AVI2 2057 aa10.81□□□□□ -0.68
GGPS1-205ENST00000482013 SH3D21A4FU49 640 aa10.81□□□□□ -0.68
GGPS1-205ENST00000482013 EFCAB7A8K855 629 aa10.81□□□□□ -0.68
GGPS1-205ENST00000482013 TMX2-CTNND1H3BSU7 103 aa10.81□□□□□ -0.68
GGPS1-205ENST00000482013 PEX12O00623 359 aa10.81□□□□□ -0.68
GGPS1-205ENST00000482013 CPNE3O75131 537 aaKnown RBP10.81□□□□□ -0.68
GGPS1-205ENST00000482013 IGKV1D-16P01601 117 aa10.81□□□□□ -0.68
GGPS1-205ENST00000482013 POU2F1P14859 743 aa10.81□□□□□ -0.68
GGPS1-205ENST00000482013 ENDOUP21128 410 aaKnown RBP10.81□□□□□ -0.68
GGPS1-205ENST00000482013 AGXTP21549 392 aa10.81□□□□□ -0.68
GGPS1-205ENST00000482013 FUT4P22083 530 aa10.81□□□□□ -0.68
GGPS1-205ENST00000482013 MMP11P24347 488 aa10.81□□□□□ -0.68
GGPS1-205ENST00000482013 CHMP24386 653 aa10.81□□□□□ -0.68
GGPS1-205ENST00000482013 EEF1B2P24534 225 aaKnown RBP10.81□□□□□ -0.68
GGPS1-205ENST00000482013 CCKBRP32239 447 aa10.81□□□□□ -0.68
GGPS1-205ENST00000482013 STAT5AP42229 794 aa10.81□□□□□ -0.68
GGPS1-205ENST00000482013 GSSP48637 474 aa10.81□□□□□ -0.68
GGPS1-205ENST00000482013 CDH15P55291 814 aa10.81□□□□□ -0.68
GGPS1-205ENST00000482013 TUBA3CQ13748 450 aa10.81□□□□□ -0.68
GGPS1-205ENST00000482013 OR1Q1Q15612 314 aa10.81□□□□□ -0.68
GGPS1-205ENST00000482013 ZBED5Q49AG3 693 aa10.81□□□□□ -0.68
GGPS1-205ENST00000482013 PDZK1Q5T2W1 519 aa10.81□□□□□ -0.68
GGPS1-205ENST00000482013 SLX4IPQ5VYV7 408 aa10.81□□□□□ -0.68
GGPS1-205ENST00000482013 HLA-DQA1Q5Y7H0 255 aa10.81□□□□□ -0.68
GGPS1-205ENST00000482013 ISLR2Q6UXK2 745 aa10.81□□□□□ -0.68
GGPS1-205ENST00000482013 ZNF730Q6ZMV8 503 aa10.81□□□□□ -0.68
GGPS1-205ENST00000482013 MBOAT2Q6ZWT7 520 aa10.81□□□□□ -0.68
GGPS1-205ENST00000482013 SLC29A4Q7RTT9 530 aa10.81□□□□□ -0.68
GGPS1-205ENST00000482013 ZER1Q7Z7L7 766 aa10.81□□□□□ -0.68
GGPS1-205ENST00000482013 B3GNT8Q7Z7M8 397 aa10.81□□□□□ -0.68
GGPS1-205ENST00000482013 SATL1Q86VE3 508 aa10.81□□□□□ -0.68
GGPS1-205ENST00000482013 CCDC71Q8IV32 467 aaPredicted RBP10.81□□□□□ -0.68
GGPS1-205ENST00000482013 P3H2Q8IVL5 708 aa10.81□□□□□ -0.68
GGPS1-205ENST00000482013 ENTHD1Q8IYW4 607 aa10.81□□□□□ -0.68
GGPS1-205ENST00000482013 ZNF527Q8NB42 609 aa10.81□□□□□ -0.68
GGPS1-205ENST00000482013 ZSCAN1Q8NBB4 408 aa10.81□□□□□ -0.68
GGPS1-205ENST00000482013 OR1N1Q8NGS0 311 aa10.81□□□□□ -0.68
GGPS1-205ENST00000482013 WDR36Q8NI36 951 aaKnown RBP10.81□□□□□ -0.68
GGPS1-205ENST00000482013 FAM81AQ8TBF8 368 aa10.81□□□□□ -0.68
GGPS1-205ENST00000482013 RHBDD1Q8TEB9 315 aa10.81□□□□□ -0.68
GGPS1-205ENST00000482013 TP53INP1Q96A56 240 aa10.81□□□□□ -0.68
GGPS1-205ENST00000482013 HSPBAP1Q96EW2 488 aa10.81□□□□□ -0.68
GGPS1-205ENST00000482013 CCNL2Q96S94 520 aaPredicted RBP10.81□□□□□ -0.68
GGPS1-205ENST00000482013 NUDT9Q9BW91 350 aa10.81□□□□□ -0.68
GGPS1-205ENST00000482013 OR8D2Q9GZM6 311 aa10.81□□□□□ -0.68
GGPS1-205ENST00000482013 DUSP21Q9H596 190 aa10.81□□□□□ -0.68
GGPS1-205ENST00000482013 UBQLN4Q9NRR5 601 aa10.81□□□□□ -0.68
GGPS1-205ENST00000482013 AKAP7Q9P0M2 348 aaPredicted RBP10.81□□□□□ -0.68
GGPS1-205ENST00000482013 COPS7AQ9UBW8 275 aa10.81□□□□□ -0.68
GGPS1-205ENST00000482013 NXT1Q9UKK6 140 aaKnown RBP10.81□□□□□ -0.68
GGPS1-205ENST00000482013 PPIEQ9UNP9 301 aaKnown RBP10.81□□□□□ -0.68
GGPS1-205ENST00000482013 RNF6Q9Y252 685 aa10.81□□□□□ -0.68
GGPS1-205ENST00000482013 SNX5Q9Y5X3 404 aa10.81□□□□□ -0.68
GGPS1-205ENST00000482013 SEC16AO15027 2179 aa10.8□□□□□ -0.68
GGPS1-205ENST00000482013 CENPVL1A0A0U1RR11 272 aa10.8□□□□□ -0.68
GGPS1-205ENST00000482013 C2orf92A0A1B0GVN3 265 aa10.8□□□□□ -0.68
GGPS1-205ENST00000482013 HTR3EA5X5Y0 456 aa10.8□□□□□ -0.68
GGPS1-205ENST00000482013 A8MUA0 341 aa10.8□□□□□ -0.68
GGPS1-205ENST00000482013 B4E171 279 aa10.8□□□□□ -0.68
GGPS1-205ENST00000482013 FRS3O43559 492 aa10.8□□□□□ -0.68
GGPS1-205ENST00000482013 WBP4O75554 376 aaKnown RBP10.8□□□□□ -0.68
GGPS1-205ENST00000482013 HEXBP07686 556 aa10.8□□□□□ -0.68
GGPS1-205ENST00000482013 NGFRP08138 427 aa10.8□□□□□ -0.68
GGPS1-205ENST00000482013 GABRB1P18505 474 aa10.8□□□□□ -0.68
GGPS1-205ENST00000482013 FPR3P25089 353 aa10.8□□□□□ -0.68
GGPS1-205ENST00000482013 TSPAN7P41732 249 aa10.8□□□□□ -0.68
GGPS1-205ENST00000482013 RBM34P42696 430 aaKnown RBP10.8□□□□□ -0.68
GGPS1-205ENST00000482013 SNRPGP62308 76 aaKnown RBP10.8□□□□□ -0.68
GGPS1-205ENST00000482013 CDK5Q00535 292 aa10.8□□□□□ -0.68
GGPS1-205ENST00000482013 E2F1Q01094 437 aa10.8□□□□□ -0.68
GGPS1-205ENST00000482013 COL9A2Q14055 689 aaPredicted RBP10.8□□□□□ -0.68
GGPS1-205ENST00000482013 LPAL2Q16609 132 aa10.8□□□□□ -0.68
GGPS1-205ENST00000482013 KLHL26Q53HC5 615 aa10.8□□□□□ -0.68
GGPS1-205ENST00000482013 FOXB2Q5VYV0 432 aa10.8□□□□□ -0.68
GGPS1-205ENST00000482013 C12orf73Q69YU5 71 aa10.8□□□□□ -0.68
GGPS1-205ENST00000482013 RASSF6Q6ZTQ3 369 aa10.8□□□□□ -0.68
GGPS1-205ENST00000482013 ZAR1Q86SH2 424 aa10.8□□□□□ -0.68
GGPS1-205ENST00000482013 LAPTM4BQ86VI4 370 aa10.8□□□□□ -0.68
GGPS1-205ENST00000482013 ALDH16A1Q8IZ83 802 aa10.8□□□□□ -0.68
GGPS1-205ENST00000482013 CLDN22Q8N7P3 220 aa10.8□□□□□ -0.68
GGPS1-205ENST00000482013 LSMEM1Q8N8F7 131 aa10.8□□□□□ -0.68
GGPS1-205ENST00000482013 BMPERQ8N8U9 685 aa10.8□□□□□ -0.68
GGPS1-205ENST00000482013 SLC38A9Q8NBW4 561 aa10.8□□□□□ -0.68
GGPS1-205ENST00000482013 BPIFB6Q8NFQ5 453 aa10.8□□□□□ -0.68
GGPS1-205ENST00000482013 OR4N2Q8NGD1 307 aa10.8□□□□□ -0.68
GGPS1-205ENST00000482013 CNIH3Q8TBE1 160 aa10.8□□□□□ -0.68
GGPS1-205ENST00000482013 METTL21AQ8WXB1 218 aa10.8□□□□□ -0.68
GGPS1-205ENST00000482013 MPP4Q96JB8 637 aa10.8□□□□□ -0.68
GGPS1-205ENST00000482013 NODALQ96S42 347 aa10.8□□□□□ -0.68
GGPS1-205ENST00000482013 SEMA4CQ9C0C4 833 aa10.8□□□□□ -0.68
GGPS1-205ENST00000482013 WDR54Q9H977 334 aa10.8□□□□□ -0.68
GGPS1-205ENST00000482013 SLC25A19Q9HC21 320 aa10.8□□□□□ -0.68
GGPS1-205ENST00000482013 RXFP3Q9NSD7 469 aa10.8□□□□□ -0.68
GGPS1-205ENST00000482013 RYDENQ9NUL5 291 aaKnown RBP10.8□□□□□ -0.68
GGPS1-205ENST00000482013 OCIAD1Q9NX40 245 aa10.8□□□□□ -0.68
GGPS1-205ENST00000482013 IMPAD1Q9NX62 359 aa10.8□□□□□ -0.68
GGPS1-205ENST00000482013 DNAJB12Q9NXW2 375 aaKnown RBP10.8□□□□□ -0.68
GGPS1-205ENST00000482013 CTSFQ9UBX1 484 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms