RNA–Protein interactions for RNA: ENST00000455596.5

HMGB3-205, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene HMGB3, Length 793 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-205ENST00000455596 UBQLNLQ8IYU4 475 aa19.19■□□□□ 0.66
HMGB3-205ENST00000455596 MEIOBQ8N635 442 aa19.19■□□□□ 0.66
HMGB3-205ENST00000455596 ANKRD42Q8N9B4 389 aa19.19■□□□□ 0.66
HMGB3-205ENST00000455596 SFXN5Q8TD22 340 aa19.19■□□□□ 0.66
HMGB3-205ENST00000455596 CDS1Q92903 461 aa19.19■□□□□ 0.66
HMGB3-205ENST00000455596 MOAP1Q96BY2 351 aa19.19■□□□□ 0.66
HMGB3-205ENST00000455596 ACTRT3Q9BYD9 372 aa19.19■□□□□ 0.66
HMGB3-205ENST00000455596 UBQLN4Q9NRR5 601 aa19.19■□□□□ 0.66
HMGB3-205ENST00000455596 HAO1Q9UJM8 370 aa19.19■□□□□ 0.66
HMGB3-205ENST00000455596 FAF1Q9UNN5 650 aaPredicted RBP19.19■□□□□ 0.66
HMGB3-205ENST00000455596 ADGRG4Q8IZF6 3080 aa19.19■□□□□ 0.66
HMGB3-205ENST00000455596 OR2M5A3KFT3 312 aa19.18■□□□□ 0.66
HMGB3-205ENST00000455596 EEF1E1-BLOC1S5C9J1V9 151 aa19.18■□□□□ 0.66
HMGB3-205ENST00000455596 EEF1E1O43324 174 aaKnown RBP19.18■□□□□ 0.66
HMGB3-205ENST00000455596 HCRTR2O43614 444 aa19.18■□□□□ 0.66
HMGB3-205ENST00000455596 GMFGO60234 142 aa19.18■□□□□ 0.66
HMGB3-205ENST00000455596 SOX30O94993 753 aa19.18■□□□□ 0.66
HMGB3-205ENST00000455596 KRT16P08779 473 aa19.18■□□□□ 0.66
HMGB3-205ENST00000455596 KIR2DL3P43628 341 aa19.18■□□□□ 0.66
HMGB3-205ENST00000455596 EEFSECP57772 596 aaKnown RBP19.18■□□□□ 0.66
HMGB3-205ENST00000455596 SNTB1Q13884 538 aaKnown RBP19.18■□□□□ 0.66
HMGB3-205ENST00000455596 PGS1Q32NB8 556 aa19.18■□□□□ 0.66
HMGB3-205ENST00000455596 CCNJQ5T5M9 372 aa19.18■□□□□ 0.66
HMGB3-205ENST00000455596 PLXDC2Q6UX71 529 aa19.18■□□□□ 0.66
HMGB3-205ENST00000455596 ZAR1Q86SH2 424 aa19.18■□□□□ 0.66
HMGB3-205ENST00000455596 TMEM200AQ86VY9 491 aa19.18■□□□□ 0.66
HMGB3-205ENST00000455596 ADAMTS15Q8TE58 950 aa19.18■□□□□ 0.66
HMGB3-205ENST00000455596 SFXN3Q9BWM7 321 aa19.18■□□□□ 0.66
HMGB3-205ENST00000455596 FBXO34Q9NWN3 711 aa19.18■□□□□ 0.66
HMGB3-205ENST00000455596 ZNF337Q9Y3M9 751 aa19.18■□□□□ 0.66
HMGB3-205ENST00000455596 LRBAP50851 2863 aa19.17■□□□□ 0.66
HMGB3-205ENST00000455596 H3BML4 177 aa19.17■□□□□ 0.66
HMGB3-205ENST00000455596 SCDO00767 359 aa19.17■□□□□ 0.66
HMGB3-205ENST00000455596 FOXF2Q12947 444 aa19.17■□□□□ 0.66
HMGB3-205ENST00000455596 BHLHB9Q6PI77 547 aa19.17■□□□□ 0.66
HMGB3-205ENST00000455596 P4HA3Q7Z4N8 544 aa19.17■□□□□ 0.66
HMGB3-205ENST00000455596 MISPQ8IVT2 679 aa19.17■□□□□ 0.66
HMGB3-205ENST00000455596 GATSQ8NAP1 163 aa19.17■□□□□ 0.66
HMGB3-205ENST00000455596 OR5M1Q8NGP8 315 aa19.17■□□□□ 0.66
HMGB3-205ENST00000455596 INTS12Q96CB8 462 aaKnown RBP19.17■□□□□ 0.66
HMGB3-205ENST00000455596 NUF2Q9BZD4 464 aa19.17■□□□□ 0.66
HMGB3-205ENST00000455596 DPY30Q9C005 99 aa19.17■□□□□ 0.66
HMGB3-205ENST00000455596 GPATCH2Q9NW75 528 aa19.17■□□□□ 0.66
HMGB3-205ENST00000455596 JKAMPQ9P055 326 aa19.17■□□□□ 0.66
HMGB3-205ENST00000455596 VDAC3Q9Y277 283 aa19.17■□□□□ 0.66
HMGB3-205ENST00000455596 DCHS2Q6V1P9 2916 aa19.17■□□□□ 0.66
HMGB3-205ENST00000455596 PDZD2O15018 2839 aa19.16■□□□□ 0.66
HMGB3-205ENST00000455596 A0A1W2PQD3 144 aa19.16■□□□□ 0.66
HMGB3-205ENST00000455596 TMEM120BA0PK00 339 aa19.16■□□□□ 0.66
HMGB3-205ENST00000455596 ATP6V1C1P21283 382 aa19.16■□□□□ 0.66
HMGB3-205ENST00000455596 SOAT1P35610 550 aa19.16■□□□□ 0.66
HMGB3-205ENST00000455596 EEF1A1P68104 462 aaKnown RBP19.16■□□□□ 0.66
HMGB3-205ENST00000455596 HBA1P69905 142 aa19.16■□□□□ 0.66
HMGB3-205ENST00000455596 BST1Q10588 318 aa19.16■□□□□ 0.66
HMGB3-205ENST00000455596 EEF1A1P5Q5VTE0 462 aa19.16■□□□□ 0.66
HMGB3-205ENST00000455596 KIF18BQ86Y91 864 aa19.16■□□□□ 0.66
HMGB3-205ENST00000455596 ZZZ3Q8IYH5 903 aa19.16■□□□□ 0.66
HMGB3-205ENST00000455596 LRRC34Q8IZ02 419 aa19.16■□□□□ 0.66
HMGB3-205ENST00000455596 GCNT2Q8N0V5 402 aa19.16■□□□□ 0.66
HMGB3-205ENST00000455596 OR5AK3PQ8NH89 298 aa19.16■□□□□ 0.66
HMGB3-205ENST00000455596 PNPOQ9NVS9 261 aa19.16■□□□□ 0.66
HMGB3-205ENST00000455596 AP4B1Q9Y6B7 739 aa19.16■□□□□ 0.66
HMGB3-205ENST00000455596 A0A087WZY1 265 aa19.15■□□□□ 0.66
HMGB3-205ENST00000455596 SEC14L5O43304 696 aa19.15■□□□□ 0.66
HMGB3-205ENST00000455596 TGM6O95932 706 aa19.15■□□□□ 0.66
HMGB3-205ENST00000455596 LBPP18428 481 aa19.15■□□□□ 0.66
HMGB3-205ENST00000455596 SUCLG1P53597 346 aaKnown RBP19.15■□□□□ 0.66
HMGB3-205ENST00000455596 FLYWCH1Q4VC44 716 aa19.15■□□□□ 0.66
HMGB3-205ENST00000455596 DCST2Q5T1A1 773 aa19.15■□□□□ 0.66
HMGB3-205ENST00000455596 OR4F3Q6IEY1 312 aa19.15■□□□□ 0.66
HMGB3-205ENST00000455596 CDH24Q86UP0 819 aa19.15■□□□□ 0.66
HMGB3-205ENST00000455596 SMPDL3BQ92485 455 aa19.15■□□□□ 0.66
HMGB3-205ENST00000455596 MEAF6Q9HAF1 191 aa19.15■□□□□ 0.66
HMGB3-205ENST00000455596 CRIM1Q9NZV1 1036 aa19.15■□□□□ 0.66
HMGB3-205ENST00000455596 STOML1Q9UBI4 398 aa19.15■□□□□ 0.66
HMGB3-205ENST00000455596 MPDZO75970 2070 aa19.14■□□□□ 0.65
HMGB3-205ENST00000455596 SLC22A20A6NK97 555 aa19.14■□□□□ 0.65
HMGB3-205ENST00000455596 RNASET2O00584 256 aaKnown RBP19.14■□□□□ 0.65
HMGB3-205ENST00000455596 TNFRSF21O75509 655 aa19.14■□□□□ 0.65
HMGB3-205ENST00000455596 ZNF41P51814 821 aaPredicted RBP19.14■□□□□ 0.65
HMGB3-205ENST00000455596 CLDN15P56746 228 aa19.14■□□□□ 0.65
HMGB3-205ENST00000455596 WDR4P57081 412 aaKnown RBP19.14■□□□□ 0.65
HMGB3-205ENST00000455596 RPS3AP61247 264 aaKnown RBP19.14■□□□□ 0.65
HMGB3-205ENST00000455596 TMEM44Q2T9K0 475 aa19.14■□□□□ 0.65
HMGB3-205ENST00000455596 OR2A2Q6IF42 318 aa19.14■□□□□ 0.65
HMGB3-205ENST00000455596 CLECL1Q8IZS7 167 aa19.14■□□□□ 0.65
HMGB3-205ENST00000455596 ZNF527Q8NB42 609 aa19.14■□□□□ 0.65
HMGB3-205ENST00000455596 OR8J2Q8NGG1 315 aa19.14■□□□□ 0.65
HMGB3-205ENST00000455596 ACTRT2Q8TDY3 377 aa19.14■□□□□ 0.65
HMGB3-205ENST00000455596 OR7D2Q96RA2 312 aa19.14■□□□□ 0.65
HMGB3-205ENST00000455596 PINK1Q9BXM7 581 aa19.14■□□□□ 0.65
HMGB3-205ENST00000455596 HOXD1Q9GZZ0 328 aa19.14■□□□□ 0.65
HMGB3-205ENST00000455596 PIGMQ9H3S5 423 aa19.14■□□□□ 0.65
HMGB3-205ENST00000455596 ITGB1BP2Q9UKP3 347 aa19.14■□□□□ 0.65
HMGB3-205ENST00000455596 PCDHGB4Q9UN71 923 aa19.14■□□□□ 0.65
HMGB3-205ENST00000455596 MYO9AB2RTY4 2548 aa19.13■□□□□ 0.65
HMGB3-205ENST00000455596 SHISA8B8ZZ34 492 aa19.13■□□□□ 0.65
HMGB3-205ENST00000455596 H0YC42 278 aa19.13■□□□□ 0.65
HMGB3-205ENST00000455596 CRHP06850 196 aa19.13■□□□□ 0.65
HMGB3-205ENST00000455596 ZNF17P17021 662 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms