RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 F8P00451 2351 aa17.94■□□□□ 0.46
SHROOM1-204ENST00000440118 OR2M5A3KFT3 312 aa17.94■□□□□ 0.46
SHROOM1-204ENST00000440118 B4DXG7 233 aa17.94■□□□□ 0.46
SHROOM1-204ENST00000440118 C6orf47O95873 294 aa17.94■□□□□ 0.46
SHROOM1-204ENST00000440118 HMGN2P05204 90 aaKnown RBP17.94■□□□□ 0.46
SHROOM1-204ENST00000440118 CCT3P49368 545 aaKnown RBP17.94■□□□□ 0.46
SHROOM1-204ENST00000440118 ZNF41P51814 821 aaPredicted RBP17.94■□□□□ 0.46
SHROOM1-204ENST00000440118 RPS3AP61247 264 aaKnown RBP17.94■□□□□ 0.46
SHROOM1-204ENST00000440118 EEF1A1P68104 462 aaKnown RBP17.94■□□□□ 0.46
SHROOM1-204ENST00000440118 CPEB4Q17RY0 729 aaKnown RBP eCLIP17.94■□□□□ 0.46
SHROOM1-204ENST00000440118 PGS1Q32NB8 556 aa17.94■□□□□ 0.46
SHROOM1-204ENST00000440118 CCNJQ5T5M9 372 aa17.94■□□□□ 0.46
SHROOM1-204ENST00000440118 EEF1A1P5Q5VTE0 462 aa17.94■□□□□ 0.46
SHROOM1-204ENST00000440118 POMZP3Q6PJE2 187 aa17.94■□□□□ 0.46
SHROOM1-204ENST00000440118 KIRREL3Q8IZU9 778 aa17.94■□□□□ 0.46
SHROOM1-204ENST00000440118 ZNF781Q8N8C0 355 aa17.94■□□□□ 0.46
SHROOM1-204ENST00000440118 ADAMTS15Q8TE58 950 aa17.94■□□□□ 0.46
SHROOM1-204ENST00000440118 HOXB13Q92826 284 aaPredicted RBP17.94■□□□□ 0.46
SHROOM1-204ENST00000440118 CDS1Q92903 461 aa17.94■□□□□ 0.46
SHROOM1-204ENST00000440118 SH3YL1Q96HL8 342 aaPredicted RBP17.94■□□□□ 0.46
SHROOM1-204ENST00000440118 UCN2Q96RP3 112 aa17.94■□□□□ 0.46
SHROOM1-204ENST00000440118 GPATCH1Q9BRR8 931 aaKnown RBP17.94■□□□□ 0.46
SHROOM1-204ENST00000440118 DUSP26Q9BV47 211 aa17.94■□□□□ 0.46
SHROOM1-204ENST00000440118 BTBD2Q9BX70 525 aa17.94■□□□□ 0.46
SHROOM1-204ENST00000440118 PINK1Q9BXM7 581 aa17.94■□□□□ 0.46
SHROOM1-204ENST00000440118 CLEC4MQ9H2X3 399 aaPredicted RBP17.94■□□□□ 0.46
SHROOM1-204ENST00000440118 PIGMQ9H3S5 423 aa17.94■□□□□ 0.46
SHROOM1-204ENST00000440118 SIRT3Q9NTG7 399 aaPredicted RBP17.94■□□□□ 0.46
SHROOM1-204ENST00000440118 PACSIN3Q9UKS6 424 aa17.94■□□□□ 0.46
SHROOM1-204ENST00000440118 RAB21Q9UL25 225 aa17.94■□□□□ 0.46
SHROOM1-204ENST00000440118 ALG1L2C9J202 215 aa17.93■□□□□ 0.46
SHROOM1-204ENST00000440118 ITM2AO43736 263 aa17.93■□□□□ 0.46
SHROOM1-204ENST00000440118 SMNDC1O75940 238 aaKnown RBP eCLIP17.93■□□□□ 0.46
SHROOM1-204ENST00000440118 SNUPNO95149 360 aaKnown RBP17.93■□□□□ 0.46
SHROOM1-204ENST00000440118 G6PDP11413 515 aa17.93■□□□□ 0.46
SHROOM1-204ENST00000440118 LCN1P31025 176 aa17.93■□□□□ 0.46
SHROOM1-204ENST00000440118 SORDQ00796 357 aa17.93■□□□□ 0.46
SHROOM1-204ENST00000440118 SGCBQ16585 318 aa17.93■□□□□ 0.46
SHROOM1-204ENST00000440118 BHLHB9Q6PI77 547 aa17.93■□□□□ 0.46
SHROOM1-204ENST00000440118 ADGRE4PQ86SQ3 457 aa17.93■□□□□ 0.46
SHROOM1-204ENST00000440118 MISPQ8IVT2 679 aa17.93■□□□□ 0.46
SHROOM1-204ENST00000440118 MOAP1Q96BY2 351 aa17.93■□□□□ 0.46
SHROOM1-204ENST00000440118 ZIM3Q96PE6 472 aa17.93■□□□□ 0.46
SHROOM1-204ENST00000440118 STACQ99469 402 aa17.93■□□□□ 0.46
SHROOM1-204ENST00000440118 ACTRT3Q9BYD9 372 aa17.93■□□□□ 0.46
SHROOM1-204ENST00000440118 BHLHE41Q9C0J9 482 aaPredicted RBP17.93■□□□□ 0.46
SHROOM1-204ENST00000440118 UBQLN4Q9NRR5 601 aa17.93■□□□□ 0.46
SHROOM1-204ENST00000440118 DUSP22Q9NRW4 184 aa17.93■□□□□ 0.46
SHROOM1-204ENST00000440118 RAP2CQ9Y3L5 183 aa17.93■□□□□ 0.46
SHROOM1-204ENST00000440118 ZNF337Q9Y3M9 751 aa17.93■□□□□ 0.46
SHROOM1-204ENST00000440118 IGLV3-32A0A0A0MS00 114 aa17.92■□□□□ 0.46
SHROOM1-204ENST00000440118 HCRTR2O43614 444 aa17.92■□□□□ 0.46
SHROOM1-204ENST00000440118 CTAG2O75638 210 aa17.92■□□□□ 0.46
SHROOM1-204ENST00000440118 TGM6O95932 706 aa17.92■□□□□ 0.46
SHROOM1-204ENST00000440118 NGFRP08138 427 aa17.92■□□□□ 0.46
SHROOM1-204ENST00000440118 TBXA2RP21731 343 aa17.92■□□□□ 0.46
SHROOM1-204ENST00000440118 BGNP21810 368 aa17.92■□□□□ 0.46
SHROOM1-204ENST00000440118 MAP3K8P41279 467 aa17.92■□□□□ 0.46
SHROOM1-204ENST00000440118 SLC1A6P48664 564 aa17.92■□□□□ 0.46
SHROOM1-204ENST00000440118 EMX2Q04743 252 aa17.92■□□□□ 0.46
SHROOM1-204ENST00000440118 GLYR1Q49A26 553 aaPredicted RBP17.92■□□□□ 0.46
SHROOM1-204ENST00000440118 HHATQ5VTY9 493 aa17.92■□□□□ 0.46
SHROOM1-204ENST00000440118 CDC73Q6P1J9 531 aa17.92■□□□□ 0.46
SHROOM1-204ENST00000440118 APOOLQ6UXV4 268 aa17.92■□□□□ 0.46
SHROOM1-204ENST00000440118 ANKRD42Q8N9B4 389 aa17.92■□□□□ 0.46
SHROOM1-204ENST00000440118 ZNF527Q8NB42 609 aa17.92■□□□□ 0.46
SHROOM1-204ENST00000440118 OR4C3Q8NH37 302 aa17.92■□□□□ 0.46
SHROOM1-204ENST00000440118 OR5AK3PQ8NH89 298 aa17.92■□□□□ 0.46
SHROOM1-204ENST00000440118 SFXN5Q8TD22 340 aa17.92■□□□□ 0.46
SHROOM1-204ENST00000440118 CXorf36Q9H7Y0 433 aa17.92■□□□□ 0.46
SHROOM1-204ENST00000440118 GIN1Q9NXP7 522 aa17.92■□□□□ 0.46
SHROOM1-204ENST00000440118 GALNT8Q9NY28 637 aa17.92■□□□□ 0.46
SHROOM1-204ENST00000440118 EDARQ9UNE0 448 aa17.92■□□□□ 0.46
SHROOM1-204ENST00000440118 AP4B1Q9Y6B7 739 aa17.92■□□□□ 0.46
SHROOM1-204ENST00000440118 A0A087WZY1 265 aa17.91■□□□□ 0.46
SHROOM1-204ENST00000440118 A0A1W2PNV4 684 aa17.91■□□□□ 0.46
SHROOM1-204ENST00000440118 A6NNC1 897 aa17.91■□□□□ 0.46
SHROOM1-204ENST00000440118 SHISA8B8ZZ34 492 aa17.91■□□□□ 0.46
SHROOM1-204ENST00000440118 H3BNH8 94 aa17.91■□□□□ 0.46
SHROOM1-204ENST00000440118 NUDT14O95848 222 aa17.91■□□□□ 0.46
SHROOM1-204ENST00000440118 FCGR2AP12318 317 aa17.91■□□□□ 0.46
SHROOM1-204ENST00000440118 ZNF17P17021 662 aa17.91■□□□□ 0.46
SHROOM1-204ENST00000440118 ME2P23368 584 aa17.91■□□□□ 0.46
SHROOM1-204ENST00000440118 RPL14P50914 215 aaKnown RBP17.91■□□□□ 0.46
SHROOM1-204ENST00000440118 SIRPAP78324 504 aa17.91■□□□□ 0.46
SHROOM1-204ENST00000440118 ZAR1Q86SH2 424 aa17.91■□□□□ 0.46
SHROOM1-204ENST00000440118 ZNF614Q8N883 585 aa17.91■□□□□ 0.46
SHROOM1-204ENST00000440118 NRGNQ92686 78 aa17.91■□□□□ 0.46
SHROOM1-204ENST00000440118 PRRG4Q9BZD6 226 aa17.91■□□□□ 0.46
SHROOM1-204ENST00000440118 PIGUQ9H490 435 aa17.91■□□□□ 0.46
SHROOM1-204ENST00000440118 ZNF395Q9H8N7 513 aaPredicted RBP17.91■□□□□ 0.46
SHROOM1-204ENST00000440118 PCDHGB4Q9UN71 923 aa17.91■□□□□ 0.46
SHROOM1-204ENST00000440118 CELSR1Q9NYQ6 3014 aa17.9■□□□□ 0.46
SHROOM1-204ENST00000440118 H0YC42 278 aa17.9■□□□□ 0.46
SHROOM1-204ENST00000440118 DYNC1I1O14576 645 aa17.9■□□□□ 0.46
SHROOM1-204ENST00000440118 EIF1AYO14602 144 aaKnown RBP17.9■□□□□ 0.46
SHROOM1-204ENST00000440118 EIF1AXP47813 144 aaKnown RBP17.9■□□□□ 0.46
SHROOM1-204ENST00000440118 SUCLG1P53597 346 aaKnown RBP17.9■□□□□ 0.46
SHROOM1-204ENST00000440118 TPD52P55327 224 aaPredicted RBP17.9■□□□□ 0.46
SHROOM1-204ENST00000440118 CLDN8P56748 225 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms