RNA–Protein interactions for RNA: ENST00000370544.9

LMO4-202, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 5,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-202ENST00000370544 MFSD9Q8NBP5 474 aa18.49■□□□□ 0.55
LMO4-202ENST00000370544 MFSD8Q8NHS3 518 aa18.49■□□□□ 0.55
LMO4-202ENST00000370544 SNIP1Q8TAD8 396 aaKnown RBP18.49■□□□□ 0.55
LMO4-202ENST00000370544 NRG4Q8WWG1 115 aa18.49■□□□□ 0.55
LMO4-202ENST00000370544 RBM24Q9BX46 236 aaKnown RBP18.49■□□□□ 0.55
LMO4-202ENST00000370544 MGAT4CQ9UBM8 478 aa18.49■□□□□ 0.55
LMO4-202ENST00000370544 ZNF443Q9Y2A4 671 aaPredicted RBP18.49■□□□□ 0.55
LMO4-202ENST00000370544 ZNF28P17035 718 aa18.49■□□□□ 0.55
LMO4-202ENST00000370544 HOXC5Q00444 222 aa18.49■□□□□ 0.55
LMO4-202ENST00000370544 PTPRRQ15256 657 aa18.49■□□□□ 0.55
LMO4-202ENST00000370544 PLAG1Q6DJT9 500 aa18.49■□□□□ 0.55
LMO4-202ENST00000370544 MEX3DQ86XN8 651 aaKnown RBP18.49■□□□□ 0.55
LMO4-202ENST00000370544 ANKRD13BQ86YJ7 626 aa18.49■□□□□ 0.55
LMO4-202ENST00000370544 HORMAD2Q8N7B1 307 aa18.49■□□□□ 0.55
LMO4-202ENST00000370544 GTF2H4Q92759 462 aa18.49■□□□□ 0.55
LMO4-202ENST00000370544 COPZ2Q9P299 210 aa18.49■□□□□ 0.55
LMO4-202ENST00000370544 PTRH2Q9Y3E5 179 aaKnown RBP18.49■□□□□ 0.55
LMO4-202ENST00000370544 GABRB3P28472 473 aa18.49■□□□□ 0.55
LMO4-202ENST00000370544 NT5C3BQ969T7 300 aa18.49■□□□□ 0.55
LMO4-202ENST00000370544 SLC22A12Q96S37 553 aa18.49■□□□□ 0.55
LMO4-202ENST00000370544 RABL2AQ9UBK7 228 aaPredicted RBP18.49■□□□□ 0.55
LMO4-202ENST00000370544 KCNN3Q9UGI6 736 aa18.49■□□□□ 0.55
LMO4-202ENST00000370544 INTS6Q9UL03 887 aaKnown RBP18.49■□□□□ 0.55
LMO4-202ENST00000370544 RABL2BQ9UNT1 228 aa18.49■□□□□ 0.55
LMO4-202ENST00000370544 MAGED1Q9Y5V3 778 aaPredicted RBP18.49■□□□□ 0.55
LMO4-202ENST00000370544 TCRBV5S1A1TA0A578 114 aa18.49■□□□□ 0.55
LMO4-202ENST00000370544 M0R129 80 aa18.49■□□□□ 0.55
LMO4-202ENST00000370544 CFL1P23528 166 aaKnown RBP18.49■□□□□ 0.55
LMO4-202ENST00000370544 ECH1Q13011 328 aa18.49■□□□□ 0.55
LMO4-202ENST00000370544 ZNF709Q8N972 641 aa18.49■□□□□ 0.55
LMO4-202ENST00000370544 TRMT10AQ8TBZ6 339 aaKnown RBP18.49■□□□□ 0.55
LMO4-202ENST00000370544 NANOS1Q8WY41 292 aaKnown RBP18.49■□□□□ 0.55
LMO4-202ENST00000370544 SFXN2Q96NB2 322 aa18.49■□□□□ 0.55
LMO4-202ENST00000370544 PRSS16Q9NQE7 514 aa18.49■□□□□ 0.55
LMO4-202ENST00000370544 POT1Q9NUX5 634 aa18.49■□□□□ 0.55
LMO4-202ENST00000370544 LRIT1Q9P2V4 623 aa18.49■□□□□ 0.55
LMO4-202ENST00000370544 CBLCQ9ULV8 474 aa18.49■□□□□ 0.55
LMO4-202ENST00000370544 FOXE1O00358 373 aaPredicted RBP18.48■□□□□ 0.55
LMO4-202ENST00000370544 NARSO43776 548 aaKnown RBP18.48■□□□□ 0.55
LMO4-202ENST00000370544 DIRAS3O95661 229 aa18.48■□□□□ 0.55
LMO4-202ENST00000370544 CPNE6O95741 557 aa18.48■□□□□ 0.55
LMO4-202ENST00000370544 CLEC14AQ86T13 490 aa18.48■□□□□ 0.55
LMO4-202ENST00000370544 METTL4Q8N3J2 472 aa18.48■□□□□ 0.55
LMO4-202ENST00000370544 NECAB3Q96P71 396 aaPredicted RBP18.48■□□□□ 0.55
LMO4-202ENST00000370544 NUMBLQ9Y6R0 609 aa18.48■□□□□ 0.55
LMO4-202ENST00000370544 PLCH1Q4KWH8 1693 aa18.48■□□□□ 0.55
LMO4-202ENST00000370544 hCG_1807616A0A1W2PRN6 198 aa18.48■□□□□ 0.55
LMO4-202ENST00000370544 LRRC26Q2I0M4 334 aa18.48■□□□□ 0.55
LMO4-202ENST00000370544 NDNFQ8TB73 568 aa18.48■□□□□ 0.55
LMO4-202ENST00000370544 BPIFA2Q96DR5 249 aa18.48■□□□□ 0.55
LMO4-202ENST00000370544 BTBD2Q9BX70 525 aa18.48■□□□□ 0.55
LMO4-202ENST00000370544 GPN2Q9H9Y4 310 aaPredicted RBP18.48■□□□□ 0.55
LMO4-202ENST00000370544 ITGAMP11215 1152 aa18.48■□□□□ 0.55
LMO4-202ENST00000370544 BORCS7-ASMTA0A0B4J1R7 106 aa18.48■□□□□ 0.55
LMO4-202ENST00000370544 VRK2Q86Y07 508 aa18.48■□□□□ 0.55
LMO4-202ENST00000370544 LIX1LQ8IVB5 337 aa18.48■□□□□ 0.55
LMO4-202ENST00000370544 ZBTB8BQ8NAP8 495 aaPredicted RBP18.48■□□□□ 0.55
LMO4-202ENST00000370544 SPTSSAQ969W0 71 aa18.48■□□□□ 0.55
LMO4-202ENST00000370544 UHRF1Q96T88 793 aaPredicted RBP18.48■□□□□ 0.55
LMO4-202ENST00000370544 RTP3Q9BQQ7 232 aa18.48■□□□□ 0.55
LMO4-202ENST00000370544 OR7A17O14581 309 aa18.48■□□□□ 0.55
LMO4-202ENST00000370544 OR2T1O43869 369 aa18.48■□□□□ 0.55
LMO4-202ENST00000370544 CCNJQ5T5M9 372 aa18.48■□□□□ 0.55
LMO4-202ENST00000370544 BOLLQ8N9W6 283 aaKnown RBP18.48■□□□□ 0.55
LMO4-202ENST00000370544 B3GNT7Q8NFL0 401 aa18.48■□□□□ 0.55
LMO4-202ENST00000370544 LMF1Q96S06 567 aa18.48■□□□□ 0.55
LMO4-202ENST00000370544 A0A1W2PQL4 384 aaPredicted RBP18.47■□□□□ 0.55
LMO4-202ENST00000370544 MEN1O00255 615 aa18.47■□□□□ 0.55
LMO4-202ENST00000370544 HOXB9P17482 250 aaPredicted RBP18.47■□□□□ 0.55
LMO4-202ENST00000370544 FNTBP49356 437 aa18.47■□□□□ 0.55
LMO4-202ENST00000370544 OR7A5Q15622 319 aa18.47■□□□□ 0.55
LMO4-202ENST00000370544 RNASE10Q5GAN6 216 aaKnown RBP18.47■□□□□ 0.55
LMO4-202ENST00000370544 SYNPOQ8N3V7 929 aa18.47■□□□□ 0.55
LMO4-202ENST00000370544 TFAP2CQ92754 450 aa18.47■□□□□ 0.55
LMO4-202ENST00000370544 SAP130Q9H0E3 1048 aa18.47■□□□□ 0.55
LMO4-202ENST00000370544 ADAM29Q9UKF5 820 aa18.47■□□□□ 0.55
LMO4-202ENST00000370544 MYH4Q9Y623 1939 aa18.47■□□□□ 0.55
LMO4-202ENST00000370544 KLKB1P03952 638 aa18.47■□□□□ 0.55
LMO4-202ENST00000370544 SOX3P41225 446 aa18.47■□□□□ 0.55
LMO4-202ENST00000370544 PPP5CP53041 499 aa18.47■□□□□ 0.55
LMO4-202ENST00000370544 HBA1P69905 142 aa18.47■□□□□ 0.55
LMO4-202ENST00000370544 ENTPD8Q5MY95 495 aa18.47■□□□□ 0.55
LMO4-202ENST00000370544 ACOT11Q8WXI4 607 aaPredicted RBP18.47■□□□□ 0.55
LMO4-202ENST00000370544 ACSS1Q9NUB1 689 aaPredicted RBP18.47■□□□□ 0.55
LMO4-202ENST00000370544 KLHL9Q9P2J3 617 aa18.47■□□□□ 0.55
LMO4-202ENST00000370544 CREBL2O60519 120 aaPredicted RBP18.47■□□□□ 0.55
LMO4-202ENST00000370544 SLC2A5P22732 501 aa18.47■□□□□ 0.55
LMO4-202ENST00000370544 FASLGP48023 281 aa18.47■□□□□ 0.55
LMO4-202ENST00000370544 SLC26A5P58743 744 aa18.47■□□□□ 0.55
LMO4-202ENST00000370544 ACTBP60709 375 aa18.47■□□□□ 0.55
LMO4-202ENST00000370544 ACTG1P63261 375 aa18.47■□□□□ 0.55
LMO4-202ENST00000370544 LSAMPQ13449 338 aa18.47■□□□□ 0.55
LMO4-202ENST00000370544 IGFN1Q86VF2 1251 aa18.47■□□□□ 0.55
LMO4-202ENST00000370544 LMNTD1Q8N9Z9 388 aa18.47■□□□□ 0.55
LMO4-202ENST00000370544 FNDC8Q8TC99 324 aa18.47■□□□□ 0.55
LMO4-202ENST00000370544 UBTD2Q8WUN7 234 aa18.47■□□□□ 0.55
LMO4-202ENST00000370544 HHIPL1Q96JK4 782 aa18.47■□□□□ 0.55
LMO4-202ENST00000370544 ZNF597Q96LX8 424 aa18.47■□□□□ 0.55
LMO4-202ENST00000370544 LMF2Q9BU23 707 aaKnown RBP18.47■□□□□ 0.55
LMO4-202ENST00000370544 C1QTNF2Q9BXJ5 285 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms