RNA–Protein interactions for RNA: YPR032W

SRO7, Transcript of Effector of Rab GTPase Sec4p, yeastyeast

Gene SRO7, Length 3,102 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRO7YPR032W BRO1P48582 844 aa4.24□□□□□ -1.73
SRO7YPR032W RFX1P48743 811 aa4.24□□□□□ -1.73
SRO7YPR032W UBP15P50101 1230 aa4.24□□□□□ -1.73
SRO7YPR032W COS6P53344 381 aa4.24□□□□□ -1.73
SRO7YPR032W FAP7Q12055 197 aaPredicted RBP4.24□□□□□ -1.73
SRO7YPR032W HMG1P12683 1054 aa4.24□□□□□ -1.73
SRO7YPR032W OPI1P21957 404 aa4.24□□□□□ -1.73
SRO7YPR032W UBA1P22515 1024 aaKnown RBP4.24□□□□□ -1.73
SRO7YPR032W BOI1P38041 980 aaKnown RBP4.24□□□□□ -1.73
SRO7YPR032W MKT1P40850 830 aaKnown RBP4.24□□□□□ -1.73
SRO7YPR032W SEC27P41811 889 aaKnown RBP4.24□□□□□ -1.73
SRO7YPR032W FYV8P46949 817 aaKnown RBP4.24□□□□□ -1.73
SRO7YPR032W FMP33P46998 180 aa4.24□□□□□ -1.73
SRO7YPR032W SOV1Q04748 898 aa4.24□□□□□ -1.73
SRO7YPR032W FUS2Q05670 677 aa4.24□□□□□ -1.73
SRO7YPR032W ECI1Q05871 280 aa4.24□□□□□ -1.73
SRO7YPR032W YLR001CQ07895 862 aa4.24□□□□□ -1.73
SRO7YPR032W ARP8Q12386 881 aaKnown RBP RIP-Chip data4.24□□□□□ -1.73not detected
SRO7YPR032W PGK1P00560 416 aaKnown RBP4.24□□□□□ -1.73
SRO7YPR032W MPH3P0CE00 602 aa4.24□□□□□ -1.73
SRO7YPR032W SSC1P0CS90 654 aaKnown RBP4.24□□□□□ -1.73
SRO7YPR032W YAK1P14680 807 aa4.24□□□□□ -1.73
SRO7YPR032W RGP1P16664 663 aa4.24□□□□□ -1.73
SRO7YPR032W PRP9P19736 530 aaKnown RBP4.24□□□□□ -1.73
SRO7YPR032W YBL055CP34220 418 aaPredicted RBP4.24□□□□□ -1.73
SRO7YPR032W IFA38P38286 347 aa4.24□□□□□ -1.73
SRO7YPR032W YHL012WP38709 493 aa4.24□□□□□ -1.73
SRO7YPR032W URB2P47108 1174 aa4.24□□□□□ -1.73
SRO7YPR032W YGR266WP53326 701 aa4.24□□□□□ -1.73
SRO7YPR032W CTF4Q01454 927 aa4.24□□□□□ -1.73
SRO7YPR032W EBS1Q03466 884 aaKnown RBP4.24□□□□□ -1.73
SRO7YPR032W YPQ2Q06328 317 aa4.24□□□□□ -1.73
SRO7YPR032W YDL114WQ07530 308 aa4.24□□□□□ -1.73
SRO7YPR032W RSA1Q08932 381 aa4.24□□□□□ -1.73
SRO7YPR032W RRP6Q12149 733 aaKnown RBP4.24□□□□□ -1.73
SRO7YPR032W MLS1P30952 554 aa4.23□□□□□ -1.73
SRO7YPR032W YME1P32795 747 aa4.23□□□□□ -1.73
SRO7YPR032W MRE11P32829 692 aa4.23□□□□□ -1.73
SRO7YPR032W PTC3P34221 468 aaKnown RBP4.23□□□□□ -1.73
SRO7YPR032W JNM1P36224 373 aa4.23□□□□□ -1.73
SRO7YPR032W SET5P38890 526 aaKnown RBP4.23□□□□□ -1.73
SRO7YPR032W MPT5P39016 859 aaKnown RBP RIP-Chip data4.23□□□□□ -1.73not detected
SRO7YPR032W YMR111CQ04461 462 aaPredicted RBP4.23□□□□□ -1.73
SRO7YPR032W CLB2P24869 491 aa4.23□□□□□ -1.73
SRO7YPR032W MMS21P38632 267 aa4.23□□□□□ -1.73
SRO7YPR032W AST2P39945 430 aaKnown RBP4.23□□□□□ -1.73
SRO7YPR032W YAP5P40574 245 aa4.23□□□□□ -1.73
SRO7YPR032W PGA2P53903 129 aa4.23□□□□□ -1.73
SRO7YPR032W YLR287CQ05881 355 aa4.23□□□□□ -1.73
SRO7YPR032W VIP1Q06685 1146 aaKnown RBP4.23□□□□□ -1.73
SRO7YPR032W FRA1Q07825 749 aa4.23□□□□□ -1.73
SRO7YPR032W GFA1P14742 717 aaKnown RBP4.22□□□□□ -1.73
SRO7YPR032W SEC20P28791 383 aa4.22□□□□□ -1.73
SRO7YPR032W PGM2P37012 569 aaKnown RBP4.22□□□□□ -1.73
SRO7YPR032W MRX3P38172 270 aa4.22□□□□□ -1.73
SRO7YPR032W RFC3P38629 340 aa4.22□□□□□ -1.73
SRO7YPR032W SET1P38827 1080 aaKnown RBP4.22□□□□□ -1.73
SRO7YPR032W STM1P39015 273 aaKnown RBP4.22□□□□□ -1.73
SRO7YPR032W PCF11P39081 626 aaPredicted RBP4.22□□□□□ -1.73
SRO7YPR032W PDS1P40316 373 aaPredicted RBP4.22□□□□□ -1.73
SRO7YPR032W EMW1P42842 904 aaKnown RBP4.22□□□□□ -1.73
SRO7YPR032W OSH6Q02201 448 aa4.22□□□□□ -1.73
SRO7YPR032W SYH1Q02875 849 aaKnown RBP4.22□□□□□ -1.73
SRO7YPR032W EEB1Q02891 456 aa4.22□□□□□ -1.73
SRO7YPR032W UME1Q03010 460 aa4.22□□□□□ -1.73
SRO7YPR032W TFB3Q03290 321 aa4.22□□□□□ -1.73
SRO7YPR032W GPI17Q04080 534 aa4.22□□□□□ -1.73
SRO7YPR032W DON1Q05610 365 aa4.22□□□□□ -1.73
SRO7YPR032W MLH2Q07980 695 aa4.22□□□□□ -1.73
SRO7YPR032W RKM1Q08961 583 aaPredicted RBP4.22□□□□□ -1.73
SRO7YPR032W BBP1Q12365 385 aa4.22□□□□□ -1.73
SRO7YPR032W RAD4P14736 754 aa4.22□□□□□ -1.73
SRO7YPR032W GCN3P14741 305 aa4.22□□□□□ -1.73
SRO7YPR032W MSH2P25847 964 aa4.22□□□□□ -1.73
SRO7YPR032W SMY1P32364 656 aaKnown RBP4.22□□□□□ -1.73
SRO7YPR032W HIR1P32479 840 aa4.22□□□□□ -1.73
SRO7YPR032W SEC6P32844 805 aa4.22□□□□□ -1.73
SRO7YPR032W COY1P34237 679 aa4.22□□□□□ -1.73
SRO7YPR032W SET3P36124 751 aa4.22□□□□□ -1.73
SRO7YPR032W MNN2P38069 597 aa4.22□□□□□ -1.73
SRO7YPR032W PIK1P39104 1066 aa4.22□□□□□ -1.73
SRO7YPR032W UBP12P39538 1254 aa4.22□□□□□ -1.73
SRO7YPR032W YJL055WP47044 245 aa4.22□□□□□ -1.73
SRO7YPR032W NOP9P47077 666 aaKnown RBP4.22□□□□□ -1.73
SRO7YPR032W BIR1P47134 954 aa4.22□□□□□ -1.73
SRO7YPR032W SDA1P53313 767 aaKnown RBP4.22□□□□□ -1.73
SRO7YPR032W FMN1Q03778 218 aa4.22□□□□□ -1.73
SRO7YPR032W YML082WQ04533 649 aaKnown RBP4.22□□□□□ -1.73
SRO7YPR032W COX20Q04935 205 aa4.22□□□□□ -1.73
SRO7YPR032W PTC5Q12511 572 aa4.22□□□□□ -1.73
SRO7YPR032W NMT1P14743 455 aa4.21□□□□□ -1.73
SRO7YPR032W SEC15P22224 910 aa4.21□□□□□ -1.73
SRO7YPR032W PDC6P26263 563 aaKnown RBP4.21□□□□□ -1.73
SRO7YPR032W UBC6P33296 250 aaPredicted RBP4.21□□□□□ -1.73
SRO7YPR032W IES1P43579 692 aa4.21□□□□□ -1.73
SRO7YPR032W TMA20P89886 181 aaPredicted RBP4.21□□□□□ -1.73
SRO7YPR032W AAD16Q02895 342 aa4.21□□□□□ -1.73
SRO7YPR032W GAS4Q08271 471 aa4.21□□□□□ -1.73
SRO7YPR032W UIP4Q08926 304 aa4.21□□□□□ -1.73
SRO7YPR032W ATP16Q12165 160 aa4.21□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 54 ms