RNA–Protein interactions for RNA: YOR227W

HER1, Transcript of Protein of unknown function, yeastyeast

Gene HER1, Length 3,741 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HER1YOR227W HIS6P40545 261 aa2.22□□□□□ -2.05
HER1YOR227W ALR2P43553 858 aa2.22□□□□□ -2.05
HER1YOR227W DUG1P43616 481 aaKnown RBP2.22□□□□□ -2.05
HER1YOR227W SRB7P47822 140 aa2.22□□□□□ -2.05
HER1YOR227W SDA1P53313 767 aaKnown RBP2.22□□□□□ -2.05
HER1YOR227W TIF35Q04067 274 aaKnown RBP2.22□□□□□ -2.05
HER1YOR227W TAF11Q04226 346 aa2.22□□□□□ -2.05
HER1YOR227W YDR286CQ05530 114 aa2.22□□□□□ -2.05
HER1YOR227W MLC2Q06580 163 aa2.22□□□□□ -2.05
HER1YOR227W GIC2Q06648 383 aa2.22□□□□□ -2.05
HER1YOR227W NBA1Q08229 501 aaKnown RBP2.22□□□□□ -2.05
HER1YOR227W YPL191CQ08930 360 aa2.22□□□□□ -2.05
HER1YOR227W CLF1Q12309 687 aaPredicted RBP2.22□□□□□ -2.05
HER1YOR227W ANP1P32629 500 aa2.22□□□□□ -2.05
HER1YOR227W ABZ1P37254 787 aaPredicted RBP2.22□□□□□ -2.05
HER1YOR227W YBR238CP38330 731 aaKnown RBP2.22□□□□□ -2.05
HER1YOR227W SPL2P38839 148 aa2.22□□□□□ -2.05
HER1YOR227W SIW14P53965 281 aa2.22□□□□□ -2.05
HER1YOR227W PEX29Q03370 554 aa2.22□□□□□ -2.05
HER1YOR227W YDR338CQ05497 695 aa2.22□□□□□ -2.05
HER1YOR227W RIX7Q07844 837 aaKnown RBP2.22□□□□□ -2.05
HER1YOR227W DBP10Q12389 995 aaKnown RBP2.22□□□□□ -2.05
HER1YOR227W HSP82P02829 709 aaKnown RBP2.22□□□□□ -2.05
HER1YOR227W ILS1P09436 1072 aaKnown RBP2.22□□□□□ -2.05
HER1YOR227W SIS1P25294 352 aaKnown RBP2.22□□□□□ -2.05
HER1YOR227W LYP1P32487 611 aa2.22□□□□□ -2.05
HER1YOR227W EBP2P36049 427 aaKnown RBP2.22□□□□□ -2.05
HER1YOR227W PCM1P38628 557 aaKnown RBP2.22□□□□□ -2.05
HER1YOR227W BCD1P38772 366 aa2.22□□□□□ -2.05
HER1YOR227W HXT6P39003 570 aaKnown RBP2.22□□□□□ -2.05
HER1YOR227W HXT7P39004 570 aa2.22□□□□□ -2.05
HER1YOR227W SAP185P40856 1058 aa2.22□□□□□ -2.05
HER1YOR227W UBP6P43593 499 aaKnown RBP2.22□□□□□ -2.05
HER1YOR227W DIB1Q06819 143 aaPredicted RBP2.22□□□□□ -2.05
HER1YOR227W PSR2Q07949 397 aa2.22□□□□□ -2.05
HER1YOR227W NEW1Q08972 1196 aaKnown RBP2.22□□□□□ -2.05
HER1YOR227W TMA46Q12000 345 aaKnown RBP2.22□□□□□ -2.05
HER1YOR227W STE6P12866 1290 aa2.21□□□□□ -2.05
HER1YOR227W SPT16P32558 1035 aaKnown RBP2.21□□□□□ -2.05
HER1YOR227W MAM1P40065 302 aa2.21□□□□□ -2.05
HER1YOR227W HUL4P40985 892 aa2.21□□□□□ -2.05
HER1YOR227W HOS2P53096 452 aaPredicted RBP2.21□□□□□ -2.05
HER1YOR227W VPS30Q02948 557 aa2.21□□□□□ -2.05
HER1YOR227W PML39Q03760 334 aa2.21□□□□□ -2.05
HER1YOR227W SYF1Q04048 859 aaPredicted RBP2.21□□□□□ -2.05
HER1YOR227W SXM1Q04175 944 aaKnown RBP2.21□□□□□ -2.05
HER1YOR227W YKU80Q04437 629 aa2.21□□□□□ -2.05
HER1YOR227W UTP4Q06679 776 aaKnown RBP2.21□□□□□ -2.05
HER1YOR227W TRE2Q08693 809 aa2.21□□□□□ -2.05
HER1YOR227W CYB2P00175 591 aa2.21□□□□□ -2.06
HER1YOR227W RPS21AP0C0V8 87 aaKnown RBP2.21□□□□□ -2.06
HER1YOR227W HVG1P0CE11 249 aa2.21□□□□□ -2.06
HER1YOR227W MSD1P15179 658 aaKnown RBP2.21□□□□□ -2.06
HER1YOR227W SFL1P20134 766 aa2.21□□□□□ -2.06
HER1YOR227W SAN1P22470 610 aa2.21□□□□□ -2.06
HER1YOR227W IRE1P32361 1115 aa2.21□□□□□ -2.06
HER1YOR227W GCD7P32502 381 aaPredicted RBP2.21□□□□□ -2.06
HER1YOR227W SPC29P33419 253 aa2.21□□□□□ -2.06
HER1YOR227W SHM1P37292 490 aaPredicted RBP2.21□□□□□ -2.06
HER1YOR227W DUN1P39009 513 aa2.21□□□□□ -2.06
HER1YOR227W QDR2P40474 542 aa2.21□□□□□ -2.06
HER1YOR227W SGM1P47166 707 aa2.21□□□□□ -2.06
HER1YOR227W GPI8P49018 411 aa2.21□□□□□ -2.06
HER1YOR227W ECM9Q02202 377 aa2.21□□□□□ -2.06
HER1YOR227W ROD1Q02805 837 aa2.21□□□□□ -2.06
HER1YOR227W SNF3P10870 884 aa2.21□□□□□ -2.06
HER1YOR227W LCB1P25045 558 aaKnown RBP2.21□□□□□ -2.06
HER1YOR227W PYC2P32327 1180 aaKnown RBP2.21□□□□□ -2.06
HER1YOR227W DPH2P32461 534 aa2.21□□□□□ -2.06
HER1YOR227W FBP26P32604 452 aa2.21□□□□□ -2.06
HER1YOR227W MRS6P32864 603 aaKnown RBP2.21□□□□□ -2.06
HER1YOR227W SCD5P34758 872 aa2.21□□□□□ -2.06
HER1YOR227W MUD2P36084 527 aaKnown RBP2.21□□□□□ -2.06
HER1YOR227W RRF1P38771 230 aa2.21□□□□□ -2.06
HER1YOR227W PEX28P38848 579 aa2.21□□□□□ -2.06
HER1YOR227W MTC3P53077 123 aa2.21□□□□□ -2.06
HER1YOR227W RRT6P53117 311 aaPredicted RBP2.21□□□□□ -2.06
HER1YOR227W PCL10P53124 433 aa2.21□□□□□ -2.06
HER1YOR227W HOT1Q03213 719 aa2.21□□□□□ -2.06
HER1YOR227W HFD1Q04458 532 aa2.21□□□□□ -2.06
HER1YOR227W SPN1Q06505 410 aaPredicted RBP2.21□□□□□ -2.06
HER1YOR227W PGC1Q08959 321 aa2.21□□□□□ -2.06
HER1YOR227W INH1P01097 85 aa2.2□□□□□ -2.06
HER1YOR227W BI4P03879 638 aa2.2□□□□□ -2.06
HER1YOR227W KRR1P25586 316 aaPredicted RBP2.2□□□□□ -2.06
HER1YOR227W MLF3P32047 452 aa2.2□□□□□ -2.06
HER1YOR227W SMY1P32364 656 aaKnown RBP2.2□□□□□ -2.06
HER1YOR227W CBF2P32504 956 aa2.2□□□□□ -2.06
HER1YOR227W PET309P32522 965 aaPredicted RBP2.2□□□□□ -2.06
HER1YOR227W YBR284WP38150 797 aa2.2□□□□□ -2.06
HER1YOR227W RXT2P38255 430 aa2.2□□□□□ -2.06
HER1YOR227W CCT5P40413 562 aaKnown RBP2.2□□□□□ -2.06
HER1YOR227W VTC2P43585 828 aa2.2□□□□□ -2.06
HER1YOR227W RMD8P43620 662 aa2.2□□□□□ -2.06
HER1YOR227W ARC35P53731 342 aaKnown RBP2.2□□□□□ -2.06
HER1YOR227W ECM38Q05902 660 aaPredicted RBP2.2□□□□□ -2.06
HER1YOR227W LCB5Q06147 687 aaKnown RBP2.2□□□□□ -2.06
HER1YOR227W QCR6P00127 147 aa2.2□□□□□ -2.06
HER1YOR227W ATP12P22135 325 aa2.2□□□□□ -2.06
HER1YOR227W LRP1P38801 184 aaKnown RBP2.2□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 19 ms