RNA–Protein interactions for RNA: YNL071W

LAT1, Transcript of Dihydrolipoamide acetyltransferase component (E2) of the PDC, yeast

Gene LAT1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LAT1	YNL071W	YLR407W	Q06070	228 aa		7.97	□□□□□ -1.13
LAT1	YNL071W	ECM7	Q06200	448 aa		7.97	□□□□□ -1.13
LAT1	YNL071W	GET3	Q12154	354 aa	Known RBP	7.97	□□□□□ -1.13
LAT1	YNL071W	PUS1	Q12211	544 aa	Known RBP	7.97	□□□□□ -1.13
LAT1	YNL071W	OSH2	Q12451	1283 aa		7.97	□□□□□ -1.13
LAT1	YNL071W	ZPS1	Q12512	249 aa		7.97	□□□□□ -1.13
LAT1	YNL071W	TRL1	P09880	827 aa	Known RBP	7.96	□□□□□ -1.13
LAT1	YNL071W	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	7.96	□□□□□ -1.13	not detected
LAT1	YNL071W	HMT1	P38074	348 aa		7.96	□□□□□ -1.13
LAT1	YNL071W	ENT3	P47160	408 aa		7.96	□□□□□ -1.13
LAT1	YNL071W	NSE5	Q03718	556 aa		7.96	□□□□□ -1.13
LAT1	YNL071W	EIS1	Q05050	843 aa	Known RBP	7.96	□□□□□ -1.13
LAT1	YNL071W	COX4	P04037	155 aa		7.95	□□□□□ -1.14
LAT1	YNL071W	PGS1	P25578	521 aa		7.95	□□□□□ -1.14
LAT1	YNL071W	MAP2	P38174	421 aa	Known RBP	7.95	□□□□□ -1.14
LAT1	YNL071W	ERC1	P38767	581 aa		7.95	□□□□□ -1.14
LAT1	YNL071W	YER186C	P40101	306 aa		7.95	□□□□□ -1.14
LAT1	YNL071W	PML39	Q03760	334 aa		7.95	□□□□□ -1.14
LAT1	YNL071W	PSK2	Q08217	1101 aa		7.95	□□□□□ -1.14
LAT1	YNL071W	BEM2	P39960	2167 aa	Known RBP	7.95	□□□□□ -1.14
LAT1	YNL071W	TAF13	P11747	167 aa		7.95	□□□□□ -1.14
LAT1	YNL071W	PDE1	P22434	369 aa		7.95	□□□□□ -1.14
LAT1	YNL071W	SGF29	P25554	259 aa		7.95	□□□□□ -1.14
LAT1	YNL071W	RAM2	P29703	316 aa		7.95	□□□□□ -1.14
LAT1	YNL071W	SEG2	P34250	1132 aa		7.95	□□□□□ -1.14
LAT1	YNL071W	MMS4	P38257	691 aa		7.95	□□□□□ -1.14
LAT1	YNL071W	BFA1	P47113	574 aa		7.95	□□□□□ -1.14
LAT1	YNL071W	SHE10	P53075	577 aa		7.95	□□□□□ -1.14
LAT1	YNL071W	LEE1	Q02799	301 aa	Known RBP	7.95	□□□□□ -1.14
LAT1	YNL071W	EEB1	Q02891	456 aa		7.95	□□□□□ -1.14
LAT1	YNL071W	TRS130	Q03660	1102 aa		7.95	□□□□□ -1.14
LAT1	YNL071W	SHS1	Q07657	551 aa		7.95	□□□□□ -1.14
LAT1	YNL071W	LAA1	P39526	2014 aa		7.94	□□□□□ -1.14
LAT1	YNL071W	TRP2	P00899	507 aa	Known RBP	7.94	□□□□□ -1.14
LAT1	YNL071W	ALG1	P16661	449 aa		7.94	□□□□□ -1.14
LAT1	YNL071W	PFK1	P16861	987 aa	Known RBP	7.94	□□□□□ -1.14
LAT1	YNL071W	MRF1	P30775	413 aa	Predicted RBP	7.94	□□□□□ -1.14
LAT1	YNL071W	RGD1	P38339	666 aa		7.94	□□□□□ -1.14
LAT1	YNL071W	LSB6	P42951	607 aa		7.94	□□□□□ -1.14
LAT1	YNL071W	SCD6	P45978	349 aa	Known RBP RIP-Chip data	7.94	□□□□□ -1.14	not detected
LAT1	YNL071W	YGR153W	P48238	217 aa		7.94	□□□□□ -1.14
LAT1	YNL071W	ADY4	Q05955	493 aa		7.94	□□□□□ -1.14
LAT1	YNL071W	HIS5	P07172	385 aa		7.93	□□□□□ -1.14
LAT1	YNL071W	RNR2	P09938	399 aa	Known RBP	7.93	□□□□□ -1.14
LAT1	YNL071W	HCM1	P25364	564 aa		7.93	□□□□□ -1.14
LAT1	YNL071W	PEX34	P25584	144 aa		7.93	□□□□□ -1.14
LAT1	YNL071W	TRM2	P33753	639 aa		7.93	□□□□□ -1.14
LAT1	YNL071W	SIP5	P40210	489 aa	Known RBP	7.93	□□□□□ -1.14
LAT1	YNL071W	CTF18	P49956	741 aa		7.93	□□□□□ -1.14
LAT1	YNL071W	STB4	P50104	949 aa		7.93	□□□□□ -1.14
LAT1	YNL071W	CAF130	P53280	1122 aa	Predicted RBP	7.93	□□□□□ -1.14
LAT1	YNL071W	VTC3	Q02725	835 aa		7.93	□□□□□ -1.14
LAT1	YNL071W	MFB1	Q04922	465 aa		7.93	□□□□□ -1.14
LAT1	YNL071W	NUM1	Q00402	2748 aa		7.92	□□□□□ -1.14
LAT1	YNL071W	RPS9A	O13516	197 aa	Known RBP	7.92	□□□□□ -1.14
LAT1	YNL071W	FUS1	P11710	512 aa		7.92	□□□□□ -1.14
LAT1	YNL071W	CKA2	P19454	339 aa		7.92	□□□□□ -1.14
LAT1	YNL071W	PRR1	P28708	518 aa		7.92	□□□□□ -1.14
LAT1	YNL071W	NAM7	P30771	971 aa	Known RBP	7.92	□□□□□ -1.14
LAT1	YNL071W	CYS3	P31373	394 aa	Known RBP	7.92	□□□□□ -1.14
LAT1	YNL071W	UBP13	P38187	747 aa		7.92	□□□□□ -1.14
LAT1	YNL071W	NUP82	P40368	713 aa		7.92	□□□□□ -1.14
LAT1	YNL071W	VTC2	P43585	828 aa		7.92	□□□□□ -1.14
LAT1	YNL071W	ENV11	P53246	860 aa		7.92	□□□□□ -1.14
LAT1	YNL071W	PIL1	P53252	339 aa	Known RBP	7.92	□□□□□ -1.14
LAT1	YNL071W	SPC98	P53540	846 aa		7.92	□□□□□ -1.14
LAT1	YNL071W	ARK1	P53974	638 aa		7.92	□□□□□ -1.14
LAT1	YNL071W	NSE1	Q07913	336 aa		7.92	□□□□□ -1.14
LAT1	YNL071W	DCS2	Q12123	353 aa		7.92	□□□□□ -1.14
LAT1	YNL071W	VPS3	P23643	1011 aa		7.91	□□□□□ -1.14
LAT1	YNL071W	YSC83	P32792	385 aa		7.91	□□□□□ -1.14
LAT1	YNL071W	PGM2	P37012	569 aa	Known RBP	7.91	□□□□□ -1.14
LAT1	YNL071W	GUP1	P53154	560 aa		7.91	□□□□□ -1.14
LAT1	YNL071W	TOF1	P53840	1238 aa		7.91	□□□□□ -1.14
LAT1	YNL071W	SFB2	P53953	876 aa		7.91	□□□□□ -1.14
LAT1	YNL071W	STP1	Q00947	519 aa		7.91	□□□□□ -1.14
LAT1	YNL071W	ADA2	Q02336	434 aa		7.91	□□□□□ -1.14
LAT1	YNL071W	YEL076C-A	P0CX16	216 aa		7.9	□□□□□ -1.14
LAT1	YNL071W	YLR464W	P0CX17	216 aa		7.9	□□□□□ -1.14
LAT1	YNL071W	RPL4A	P10664	362 aa	Known RBP	7.9	□□□□□ -1.14
LAT1	YNL071W	PET10	P36139	283 aa		7.9	□□□□□ -1.14
LAT1	YNL071W	RFC5	P38251	354 aa		7.9	□□□□□ -1.14
LAT1	YNL071W	YEL076C	P39971	216 aa		7.9	□□□□□ -1.14
LAT1	YNL071W	RPL4B	P49626	362 aa	Known RBP	7.9	□□□□□ -1.14
LAT1	YNL071W	ORC5	P50874	479 aa		7.9	□□□□□ -1.14
LAT1	YNL071W	UBA2	P52488	636 aa		7.9	□□□□□ -1.14
LAT1	YNL071W	TAM41	P53230	385 aa		7.9	□□□□□ -1.14
LAT1	YNL071W	PEX19	Q07418	342 aa		7.9	□□□□□ -1.14
LAT1	YNL071W	GAL80	P04387	435 aa		7.89	□□□□□ -1.15
LAT1	YNL071W	PTC4	P38089	393 aa		7.89	□□□□□ -1.15
LAT1	YNL071W	FMO1	P38866	432 aa		7.89	□□□□□ -1.15
LAT1	YNL071W	TAF1	P46677	1066 aa		7.89	□□□□□ -1.15
LAT1	YNL071W	FYV8	P46949	817 aa	Known RBP	7.89	□□□□□ -1.15
LAT1	YNL071W	FAR11	P53917	953 aa		7.89	□□□□□ -1.15
LAT1	YNL071W	SEC5	P89102	971 aa		7.89	□□□□□ -1.15
LAT1	YNL071W	YHM2	Q04013	314 aa		7.89	□□□□□ -1.15
LAT1	YNL071W	FMP25	Q08023	583 aa		7.89	□□□□□ -1.15
LAT1	YNL071W	PCK1	P10963	549 aa		7.88	□□□□□ -1.15
LAT1	YNL071W	SSB1	P11484	613 aa	Known RBP	7.88	□□□□□ -1.15
LAT1	YNL071W	SSB2	P40150	613 aa	Known RBP	7.88	□□□□□ -1.15

Retrieved 100 of 5,963 RNA–protein pairs in 20.3 ms