RNA–Protein interactions for RNA: YIL056W

VHR1, Transcript of Transcriptional activator, yeast

Gene VHR1, Length 1,923 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VHR1	YIL056W	CIT2	P08679	460 aa		4.21	□□□□□ -1.74
VHR1	YIL056W	DAL7	P21826	554 aa		4.21	□□□□□ -1.74
VHR1	YIL056W	CAD1	P24813	409 aa	Known RBP	4.21	□□□□□ -1.74
VHR1	YIL056W	CDC20	P26309	610 aa		4.21	□□□□□ -1.74
VHR1	YIL056W	URA1	P28272	314 aa	Predicted RBP	4.21	□□□□□ -1.74
VHR1	YIL056W	RPD3	P32561	433 aa		4.21	□□□□□ -1.74
VHR1	YIL056W	DSS1	P39112	969 aa		4.21	□□□□□ -1.74
VHR1	YIL056W	SHR5	P41912	237 aa		4.21	□□□□□ -1.74
VHR1	YIL056W	YDR132C	Q03900	495 aa		4.21	□□□□□ -1.74
VHR1	YIL056W	NOP12	Q08208	459 aa	Known RBP	4.21	□□□□□ -1.74
VHR1	YIL056W	ENV7	Q12003	364 aa		4.21	□□□□□ -1.74
VHR1	YIL056W	HMI1	Q12039	706 aa		4.21	□□□□□ -1.74
VHR1	YIL056W	PRC1	P00729	532 aa		4.21	□□□□□ -1.74
VHR1	YIL056W	GSY1	P23337	708 aa		4.21	□□□□□ -1.74
VHR1	YIL056W	CYS3	P31373	394 aa	Known RBP	4.21	□□□□□ -1.74
VHR1	YIL056W	YBR238C	P38330	731 aa	Known RBP	4.21	□□□□□ -1.74
VHR1	YIL056W	MPT5	P39016	859 aa	Known RBP RIP-Chip data	4.21	□□□□□ -1.74	not detected
VHR1	YIL056W	PLB1	P39105	664 aa		4.21	□□□□□ -1.74
VHR1	YIL056W	MCM6	P53091	1017 aa	Known RBP	4.21	□□□□□ -1.74
VHR1	YIL056W	RNH70	P53331	553 aa		4.21	□□□□□ -1.74
VHR1	YIL056W	POB3	Q04636	552 aa	Known RBP	4.21	□□□□□ -1.74
VHR1	YIL056W	YLR224W	Q05947	369 aa		4.21	□□□□□ -1.74
VHR1	YIL056W	WHI4	Q07655	649 aa	Known RBP	4.21	□□□□□ -1.74
VHR1	YIL056W	GDH3	P39708	457 aa		4.2	□□□□□ -1.74
VHR1	YIL056W	YKE2	P52553	114 aa		4.2	□□□□□ -1.74
VHR1	YIL056W	VPS62	P53285	467 aa		4.2	□□□□□ -1.74
VHR1	YIL056W	YKR011C	Q02209	353 aa		4.2	□□□□□ -1.74
VHR1	YIL056W	BUL2	Q03758	920 aa	Known RBP	4.2	□□□□□ -1.74
VHR1	YIL056W	SSL1	Q04673	461 aa	Predicted RBP	4.2	□□□□□ -1.74
VHR1	YIL056W	REH1	Q06709	432 aa		4.2	□□□□□ -1.74
VHR1	YIL056W	ADY3	Q07732	790 aa		4.2	□□□□□ -1.74
VHR1	YIL056W	AIM44	Q99299	758 aa		4.2	□□□□□ -1.74
VHR1	YIL056W	YKL222C	P35995	705 aa		4.19	□□□□□ -1.74
VHR1	YIL056W	EMC3	P36039	253 aa		4.19	□□□□□ -1.74
VHR1	YIL056W	PRE10	P21242	288 aa	Known RBP RIP-Chip data	4.19	□□□□□ -1.74	not detected
VHR1	YIL056W	BUD6	P41697	788 aa		4.19	□□□□□ -1.74
VHR1	YIL056W	TAD1	P53065	400 aa		4.19	□□□□□ -1.74
VHR1	YIL056W	YGR283C	P53336	341 aa	Predicted RBP	4.19	□□□□□ -1.74
VHR1	YIL056W	PPM2	Q08282	695 aa		4.19	□□□□□ -1.74
VHR1	YIL056W	MET7	Q08645	548 aa		4.19	□□□□□ -1.74
VHR1	YIL056W	PER1	P25625	357 aa		4.18	□□□□□ -1.74
VHR1	YIL056W	GYP8	P43570	497 aa		4.18	□□□□□ -1.74
VHR1	YIL056W	ALY2	P47029	1046 aa		4.17	□□□□□ -1.74
VHR1	YIL056W	MNN10	P50108	393 aa	Known RBP	4.17	□□□□□ -1.74
VHR1	YIL056W	ZDS1	P50111	915 aa	Known RBP	4.17	□□□□□ -1.74
VHR1	YIL056W	ESC8	Q08119	714 aa		4.17	□□□□□ -1.74
VHR1	YIL056W	YOR022C	Q12204	715 aa		4.17	□□□□□ -1.74
VHR1	YIL056W	NPC2	Q12408	173 aa		4.17	□□□□□ -1.74
VHR1	YIL056W	DIF1	O13577	133 aa		4.17	□□□□□ -1.74
VHR1	YIL056W	THI80	P35202	319 aa		4.17	□□□□□ -1.74
VHR1	YIL056W	HDA1	P53973	706 aa		4.17	□□□□□ -1.74
VHR1	YIL056W	CLU1	Q03690	1277 aa	Known RBP	4.17	□□□□□ -1.74
VHR1	YIL056W	RSC3	Q06639	885 aa		4.17	□□□□□ -1.74
VHR1	YIL056W	SWM1	Q12379	170 aa		4.17	□□□□□ -1.74
VHR1	YIL056W	CDC6	P09119	513 aa		4.16	□□□□□ -1.74
VHR1	YIL056W	SPC29	P33419	253 aa		4.16	□□□□□ -1.74
VHR1	YIL056W	ORC1	P54784	914 aa	Predicted RBP	4.16	□□□□□ -1.74
VHR1	YIL056W	CRR1	Q05790	422 aa		4.16	□□□□□ -1.74
VHR1	YIL056W	YCL002C	P25565	263 aa		4.15	□□□□□ -1.74
VHR1	YIL056W	FLR1	P38124	548 aa		4.15	□□□□□ -1.74
VHR1	YIL056W	RPN10	P38886	268 aa	Known RBP	4.15	□□□□□ -1.74
VHR1	YIL056W	SET5	P38890	526 aa	Known RBP	4.15	□□□□□ -1.74
VHR1	YIL056W	CHA4	P43634	648 aa		4.15	□□□□□ -1.74
VHR1	YIL056W	LRS4	Q04087	347 aa	Known RBP	4.15	□□□□□ -1.74
VHR1	YIL056W	SFP1	P32432	683 aa		4.15	□□□□□ -1.75
VHR1	YIL056W	PEX6	P33760	1030 aa		4.15	□□□□□ -1.75
VHR1	YIL056W	LST4	P34239	828 aa		4.15	□□□□□ -1.75
VHR1	YIL056W	SHM2	P37291	469 aa	Known RBP	4.15	□□□□□ -1.75
VHR1	YIL056W	NMD2	P38798	1089 aa	Known RBP	4.15	□□□□□ -1.75
VHR1	YIL056W	YHR078W	P38799	552 aa		4.15	□□□□□ -1.75
VHR1	YIL056W	GIP4	P39732	760 aa		4.15	□□□□□ -1.75
VHR1	YIL056W	PZF1	P39933	429 aa		4.15	□□□□□ -1.75
VHR1	YIL056W	ALG12	P53730	551 aa		4.15	□□□□□ -1.75
VHR1	YIL056W	UPC2	Q12151	913 aa		4.15	□□□□□ -1.75
VHR1	YIL056W	STE11	P23561	717 aa		4.14	□□□□□ -1.75
VHR1	YIL056W	HCM1	P25364	564 aa		4.14	□□□□□ -1.75
VHR1	YIL056W	MSH2	P25847	964 aa		4.14	□□□□□ -1.75
VHR1	YIL056W	NGG1	P32494	702 aa		4.14	□□□□□ -1.75
VHR1	YIL056W	STO1	P34160	861 aa	Known RBP	4.14	□□□□□ -1.75
VHR1	YIL056W	RRP14	P36080	434 aa	Known RBP	4.14	□□□□□ -1.75
VHR1	YIL056W	SDP1	P40479	209 aa		4.14	□□□□□ -1.75
VHR1	YIL056W	URM1	P40554	99 aa	Predicted RBP	4.14	□□□□□ -1.75
VHR1	YIL056W	RLP7	P40693	322 aa	Known RBP	4.14	□□□□□ -1.75
VHR1	YIL056W	DUS1	P53759	423 aa	Known RBP	4.14	□□□□□ -1.75
VHR1	YIL056W	KCS1	Q12494	1050 aa		4.14	□□□□□ -1.75
VHR1	YIL056W	PFK1	P16861	987 aa	Known RBP	4.13	□□□□□ -1.75
VHR1	YIL056W	VBA3	P25594	458 aa		4.13	□□□□□ -1.75
VHR1	YIL056W	YFL052W	P43551	465 aa		4.13	□□□□□ -1.75
VHR1	YIL056W	NCS6	P53088	359 aa		4.13	□□□□□ -1.75
VHR1	YIL056W	ATP25	Q03153	612 aa		4.13	□□□□□ -1.75
VHR1	YIL056W	PEX19	Q07418	342 aa		4.13	□□□□□ -1.75
VHR1	YIL056W	HAL9	Q12180	1030 aa		4.13	□□□□□ -1.75
VHR1	YIL056W	UGO1	Q03327	502 aa		4.13	□□□□□ -1.75
VHR1	YIL056W	PKH1	Q03407	766 aa		4.13	□□□□□ -1.75
VHR1	YIL056W	CTS1	P29029	562 aa		4.12	□□□□□ -1.75
VHR1	YIL056W	SAK1	P38990	1142 aa		4.12	□□□□□ -1.75
VHR1	YIL056W	DOT6	P40059	670 aa	Known RBP	4.12	□□□□□ -1.75
VHR1	YIL056W	SSY5	P47002	699 aa		4.12	□□□□□ -1.75
VHR1	YIL056W	MTR3	P48240	250 aa	Predicted RBP	4.12	□□□□□ -1.75
VHR1	YIL056W	AIM39	Q08223	395 aa		4.12	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 32.5 ms