RNA–Protein interactions for RNA: YDR432W

NPL3, Transcript of RNA-binding protein, yeast

Gene NPL3, Length 1,245 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NPL3	YDR432W	ENV11	P53246	860 aa		13.99	□□□□□ -0.17
NPL3	YDR432W	VTC3	Q02725	835 aa		13.99	□□□□□ -0.17
NPL3	YDR432W	HAP2	P06774	265 aa		13.98	□□□□□ -0.17
NPL3	YDR432W	IMG2	P25642	146 aa	Predicted RBP	13.98	□□□□□ -0.17
NPL3	YDR432W	NAM7	P30771	971 aa	Known RBP	13.98	□□□□□ -0.17
NPL3	YDR432W	UBP13	P38187	747 aa		13.98	□□□□□ -0.17
NPL3	YDR432W	PEX28	P38848	579 aa		13.98	□□□□□ -0.17
NPL3	YDR432W	YER186C	P40101	306 aa		13.98	□□□□□ -0.17
NPL3	YDR432W	ALG11	P53954	548 aa	Known RBP	13.98	□□□□□ -0.17
NPL3	YDR432W	RCR2	Q03446	210 aa	Known RBP	13.98	□□□□□ -0.17
NPL3	YDR432W	TRS130	Q03660	1102 aa		13.98	□□□□□ -0.17
NPL3	YDR432W	ZPS1	Q12512	249 aa		13.98	□□□□□ -0.17
NPL3	YDR432W	ATP1	P07251	545 aa	Known RBP	13.97	□□□□□ -0.17
NPL3	YDR432W	ISY1	P21374	235 aa	Predicted RBP	13.97	□□□□□ -0.17
NPL3	YDR432W	MMS4	P38257	691 aa		13.97	□□□□□ -0.17
NPL3	YDR432W	TAM41	P53230	385 aa		13.97	□□□□□ -0.17
NPL3	YDR432W	YML083C	Q04526	418 aa		13.97	□□□□□ -0.17
NPL3	YDR432W	HCR1	Q05775	265 aa	Known RBP	13.97	□□□□□ -0.17
NPL3	YDR432W	SGO1	Q08490	590 aa		13.97	□□□□□ -0.17
NPL3	YDR432W	PUS1	Q12211	544 aa	Known RBP	13.97	□□□□□ -0.17
NPL3	YDR432W	FAB1	P34756	2278 aa		13.97	□□□□□ -0.17
NPL3	YDR432W	PCK1	P10963	549 aa		13.96	□□□□□ -0.17
NPL3	YDR432W	KEX2	P13134	814 aa		13.96	□□□□□ -0.17
NPL3	YDR432W	APE1	P14904	514 aa		13.96	□□□□□ -0.17
NPL3	YDR432W	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	13.96	□□□□□ -0.17	not detected
NPL3	YDR432W	URA1	P28272	314 aa	Predicted RBP	13.96	□□□□□ -0.17
NPL3	YDR432W	CYS3	P31373	394 aa	Known RBP	13.96	□□□□□ -0.17
NPL3	YDR432W	VPH1	P32563	840 aa	Known RBP	13.96	□□□□□ -0.17
NPL3	YDR432W	HMT1	P38074	348 aa		13.96	□□□□□ -0.17
NPL3	YDR432W	MAF1	P41910	395 aa		13.96	□□□□□ -0.17
NPL3	YDR432W	OSH2	Q12451	1283 aa		13.96	□□□□□ -0.17
NPL3	YDR432W	HIS4	P00815	799 aa	Known RBP	13.95	□□□□□ -0.18
NPL3	YDR432W	MNN4	P36044	1178 aa		13.95	□□□□□ -0.18
NPL3	YDR432W	TOF1	P53840	1238 aa		13.95	□□□□□ -0.18
NPL3	YDR432W	BIK1	P11709	440 aa		13.94	□□□□□ -0.18
NPL3	YDR432W	RGP1	P16664	663 aa		13.94	□□□□□ -0.18
NPL3	YDR432W	BET2	P20133	325 aa		13.94	□□□□□ -0.18
NPL3	YDR432W	RAD27	P26793	382 aa		13.94	□□□□□ -0.18
NPL3	YDR432W	PRX1	P34227	261 aa	Known RBP	13.94	□□□□□ -0.18
NPL3	YDR432W	MAL33	P38157	468 aa		13.94	□□□□□ -0.18
NPL3	YDR432W	RIM4	P38741	713 aa		13.94	□□□□□ -0.18
NPL3	YDR432W	SCD6	P45978	349 aa	Known RBP RIP-Chip data	13.94	□□□□□ -0.18	not detected
NPL3	YDR432W	BFA1	P47113	574 aa		13.94	□□□□□ -0.18
NPL3	YDR432W	EEB1	Q02891	456 aa		13.94	□□□□□ -0.18
NPL3	YDR432W	IRC10	Q08118	586 aa		13.94	□□□□□ -0.18
NPL3	YDR432W	PLP2	Q12017	286 aa		13.94	□□□□□ -0.18
NPL3	YDR432W	RRD2	Q12461	358 aa		13.94	□□□□□ -0.18
NPL3	YDR432W	SNF7	P39929	240 aa	Known RBP	13.93	□□□□□ -0.18
NPL3	YDR432W	PEX14	P53112	341 aa		13.93	□□□□□ -0.18
NPL3	YDR432W	NUT1	P53114	1132 aa		13.93	□□□□□ -0.18
NPL3	YDR432W	CWC21	Q03375	135 aa	Known RBP	13.93	□□□□□ -0.18
NPL3	YDR432W	PEX1	P24004	1043 aa		13.92	□□□□□ -0.18
NPL3	YDR432W	TRM2	P33753	639 aa		13.92	□□□□□ -0.18
NPL3	YDR432W	MNR2	P35724	969 aa		13.92	□□□□□ -0.18
NPL3	YDR432W	MGA2	P40578	1113 aa		13.92	□□□□□ -0.18
NPL3	YDR432W	VTC2	P43585	828 aa		13.92	□□□□□ -0.18
NPL3	YDR432W	ORC5	P50874	479 aa		13.92	□□□□□ -0.18
NPL3	YDR432W	YDR344C	Q05510	147 aa		13.92	□□□□□ -0.18
NPL3	YDR432W	HRQ1	Q05549	1077 aa		13.92	□□□□□ -0.18
NPL3	YDR432W	SHS1	Q07657	551 aa		13.92	□□□□□ -0.18
NPL3	YDR432W	MRF1	P30775	413 aa	Predicted RBP	13.91	□□□□□ -0.18
NPL3	YDR432W	REC8	Q12188	680 aa		13.91	□□□□□ -0.18
NPL3	YDR432W	CIT2	P08679	460 aa		13.9	□□□□□ -0.18
NPL3	YDR432W	HMG2	P12684	1045 aa		13.9	□□□□□ -0.18
NPL3	YDR432W	KGD2	P19262	463 aa	Predicted RBP	13.9	□□□□□ -0.18
NPL3	YDR432W	PPS1	P38148	807 aa		13.9	□□□□□ -0.18
NPL3	YDR432W	DJP1	P40564	432 aa		13.9	□□□□□ -0.18
NPL3	YDR432W	COG8	Q04632	607 aa		13.9	□□□□□ -0.18
NPL3	YDR432W	YDL057W	Q07379	328 aa		13.9	□□□□□ -0.18
NPL3	YDR432W	CDC53	Q12018	815 aa	Known RBP	13.9	□□□□□ -0.18
NPL3	YDR432W	CCH1	P50077	2039 aa		13.9	□□□□□ -0.18
NPL3	YDR432W	TOR1	P35169	2470 aa		13.89	□□□□□ -0.19
NPL3	YDR432W	PGS1	P25578	521 aa		13.89	□□□□□ -0.19
NPL3	YDR432W	PRR1	P28708	518 aa		13.89	□□□□□ -0.19
NPL3	YDR432W	PEX2	P32800	271 aa		13.89	□□□□□ -0.19
NPL3	YDR432W	ASN1	P49089	572 aa	Known RBP	13.89	□□□□□ -0.19
NPL3	YDR432W	CUE3	P53137	624 aa	Known RBP	13.89	□□□□□ -0.19
NPL3	YDR432W	YPL277C	Q08989	487 aa		13.89	□□□□□ -0.19
NPL3	YDR432W	LSP1	Q12230	341 aa	Known RBP	13.89	□□□□□ -0.19
NPL3	YDR432W	SPE1	P08432	466 aa		13.88	□□□□□ -0.19
NPL3	YDR432W	MAS1	P10507	462 aa		13.88	□□□□□ -0.19
NPL3	YDR432W	PHO8	P11491	566 aa		13.88	□□□□□ -0.19
NPL3	YDR432W	RDS1	P25611	832 aa		13.88	□□□□□ -0.19
NPL3	YDR432W	VPS24	P36095	224 aa	Known RBP	13.88	□□□□□ -0.19
NPL3	YDR432W	ULI1	P43604	169 aa		13.88	□□□□□ -0.19
NPL3	YDR432W	RPL4A	P10664	362 aa	Known RBP	13.87	□□□□□ -0.19
NPL3	YDR432W	TAF13	P11747	167 aa		13.87	□□□□□ -0.19
NPL3	YDR432W	PUP3	P25451	205 aa	Known RBP	13.87	□□□□□ -0.19
NPL3	YDR432W	IME2	P32581	645 aa		13.87	□□□□□ -0.19
NPL3	YDR432W	SIP5	P40210	489 aa	Known RBP	13.87	□□□□□ -0.19
NPL3	YDR432W	LSB6	P42951	607 aa		13.87	□□□□□ -0.19
NPL3	YDR432W	YFL034W	P43564	1073 aa		13.87	□□□□□ -0.19
NPL3	YDR432W	RPL4B	P49626	362 aa	Known RBP	13.87	□□□□□ -0.19
NPL3	YDR432W	STB4	P50104	949 aa		13.87	□□□□□ -0.19
NPL3	YDR432W	SPC98	P53540	846 aa		13.87	□□□□□ -0.19
NPL3	YDR432W	STP1	Q00947	519 aa		13.87	□□□□□ -0.19
NPL3	YDR432W	SSB1	P11484	613 aa	Known RBP	13.86	□□□□□ -0.19
NPL3	YDR432W	BMH1	P29311	267 aa	Known RBP	13.86	□□□□□ -0.19
NPL3	YDR432W	PCM1	P38628	557 aa	Known RBP	13.86	□□□□□ -0.19
NPL3	YDR432W	SSB2	P40150	613 aa	Known RBP	13.86	□□□□□ -0.19

Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms