RNA–Protein interactions for RNA: YDR192C

NUP42, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP42, Length 1,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP42YDR192C GSY1P23337 708 aa5.85□□□□□ -1.47
NUP42YDR192C FUN30P31380 1131 aa5.85□□□□□ -1.47
NUP42YDR192C REC104P33323 182 aa5.85□□□□□ -1.47
NUP42YDR192C PEX7P39108 375 aa5.85□□□□□ -1.47
NUP42YDR192C GDH3P39708 457 aa5.85□□□□□ -1.47
NUP42YDR192C GYP7P48365 746 aa5.85□□□□□ -1.47
NUP42YDR192C RCL1Q08096 367 aaPredicted RBP5.85□□□□□ -1.47
NUP42YDR192C MCA1Q08601 432 aa5.85□□□□□ -1.47
NUP42YDR192C SEC7P11075 2009 aaKnown RBP5.84□□□□□ -1.47
NUP42YDR192C SPS1P08458 490 aa5.84□□□□□ -1.47
NUP42YDR192C ACE2P21192 770 aa5.84□□□□□ -1.47
NUP42YDR192C ADP1P25371 1049 aa5.84□□□□□ -1.47
NUP42YDR192C ESL2P36168 1195 aa5.84□□□□□ -1.47
NUP42YDR192C YAP3P38749 330 aa5.84□□□□□ -1.47
NUP42YDR192C SEC26P41810 973 aaKnown RBP5.84□□□□□ -1.47
NUP42YDR192C ALG2P43636 503 aa5.84□□□□□ -1.47
NUP42YDR192C FOL2P51601 243 aaKnown RBP5.84□□□□□ -1.47
NUP42YDR192C SVS1Q12254 260 aa5.84□□□□□ -1.47
NUP42YDR192C YPR071WQ12346 211 aa5.84□□□□□ -1.47
NUP42YDR192C NOP14Q99207 810 aaKnown RBP5.84□□□□□ -1.47
NUP42YDR192C YBT1P32386 1661 aa5.83□□□□□ -1.48
NUP42YDR192C TOP3P13099 656 aa5.83□□□□□ -1.48
NUP42YDR192C CDC48P25694 835 aaKnown RBP5.83□□□□□ -1.48
NUP42YDR192C SFP1P32432 683 aa5.83□□□□□ -1.48
NUP42YDR192C AIM26P32858 118 aa5.83□□□□□ -1.48
NUP42YDR192C PTC7P38797 343 aa5.83□□□□□ -1.48
NUP42YDR192C YER158CP40095 573 aa5.83□□□□□ -1.48
NUP42YDR192C YFL054CP43549 646 aa5.83□□□□□ -1.48
NUP42YDR192C NIT3P49954 291 aa5.83□□□□□ -1.48
NUP42YDR192C SRT1Q03175 343 aa5.83□□□□□ -1.48
NUP42YDR192C BUL2Q03758 920 aaKnown RBP5.83□□□□□ -1.48
NUP42YDR192C KIN2P13186 1147 aaKnown RBP5.82□□□□□ -1.48
NUP42YDR192C PEX6P33760 1030 aa5.82□□□□□ -1.48
NUP42YDR192C YKL151CP36059 337 aa5.82□□□□□ -1.48
NUP42YDR192C RFC5P38251 354 aa5.82□□□□□ -1.48
NUP42YDR192C YBR238CP38330 731 aaKnown RBP5.82□□□□□ -1.48
NUP42YDR192C TOK1P40310 691 aa5.82□□□□□ -1.48
NUP42YDR192C DAM1P53267 343 aa5.82□□□□□ -1.48
NUP42YDR192C YGR130CP53278 816 aa5.82□□□□□ -1.48
NUP42YDR192C NTG2Q08214 380 aa5.82□□□□□ -1.48
NUP42YDR192C OSW2Q12202 724 aa5.82□□□□□ -1.48
NUP42YDR192C CYC7P00045 113 aa5.81□□□□□ -1.48
NUP42YDR192C TSL1P38427 1098 aaKnown RBP5.81□□□□□ -1.48
NUP42YDR192C GTS1P40956 396 aa5.81□□□□□ -1.48
NUP42YDR192C MED7Q08278 222 aa5.81□□□□□ -1.48
NUP42YDR192C MDM12Q92328 271 aa5.81□□□□□ -1.48
NUP42YDR192C SEC3P33332 1336 aaKnown RBP5.8□□□□□ -1.48
NUP42YDR192C AFR1P33304 620 aa5.8□□□□□ -1.48
NUP42YDR192C GIC1P38785 314 aa5.8□□□□□ -1.48
NUP42YDR192C MTC3P53077 123 aa5.8□□□□□ -1.48
NUP42YDR192C SSY1Q03770 852 aa5.8□□□□□ -1.48
NUP42YDR192C YPR196WQ06595 470 aa5.8□□□□□ -1.48
NUP42YDR192C RTC1Q08281 1341 aa5.79□□□□□ -1.48
NUP42YDR192C GCN2P15442 1659 aa5.79□□□□□ -1.48
NUP42YDR192C RAD53P22216 821 aa5.79□□□□□ -1.48
NUP42YDR192C NPP1P25353 742 aa5.79□□□□□ -1.48
NUP42YDR192C CCT8P47079 568 aaKnown RBP5.79□□□□□ -1.48
NUP42YDR192C YJR142WP47173 342 aa5.79□□□□□ -1.48
NUP42YDR192C YKE2P52553 114 aa5.79□□□□□ -1.48
NUP42YDR192C MAL11P53048 616 aa5.79□□□□□ -1.48
NUP42YDR192C ORC3P54790 616 aa5.79□□□□□ -1.48
NUP42YDR192C SDH1Q00711 640 aa5.79□□□□□ -1.48
NUP42YDR192C RSM24Q03976 319 aa5.79□□□□□ -1.48
NUP42YDR192C PHR1P05066 565 aaKnown RBP RIP-Chip data5.78□□□□□ -1.48not detected
NUP42YDR192C MPH2P0CD99 609 aa5.78□□□□□ -1.48
NUP42YDR192C SRM1P21827 482 aa5.78□□□□□ -1.48
NUP42YDR192C SPC29P33419 253 aa5.78□□□□□ -1.48
NUP42YDR192C EMC3P36039 253 aa5.78□□□□□ -1.48
NUP42YDR192C YAP1801P38856 637 aa5.78□□□□□ -1.48
NUP42YDR192C DSS1P39112 969 aa5.78□□□□□ -1.48
NUP42YDR192C REH1Q06709 432 aa5.78□□□□□ -1.48
NUP42YDR192C GCD1P09032 578 aaPredicted RBP5.77□□□□□ -1.49
NUP42YDR192C JSN1P47135 1091 aaKnown RBP RIP-Chip data5.77□□□□□ -1.49not detected
NUP42YDR192C HFM1P51979 1187 aa5.77□□□□□ -1.49
NUP42YDR192C VPS30Q02948 557 aa5.77□□□□□ -1.49
NUP42YDR192C ATP25Q03153 612 aa5.77□□□□□ -1.49
NUP42YDR192C SIZ1Q04195 904 aa5.77□□□□□ -1.49
NUP42YDR192C RAV1P47104 1357 aa5.77□□□□□ -1.49
NUP42YDR192C RPP2AP05319 106 aaKnown RBP5.76□□□□□ -1.49
NUP42YDR192C APL1P27351 700 aa5.76□□□□□ -1.49
NUP42YDR192C YEL1P34225 687 aa5.76□□□□□ -1.49
NUP42YDR192C ECM21P38167 1117 aaKnown RBP5.76□□□□□ -1.49
NUP42YDR192C YGR283CP53336 341 aaPredicted RBP5.76□□□□□ -1.49
NUP42YDR192C MAP1Q01662 387 aaKnown RBP RIP-Chip data5.76□□□□□ -1.49not detected
NUP42YDR192C TFB2Q02939 513 aa5.76□□□□□ -1.49
NUP42YDR192C YDR514CQ04408 483 aa5.76□□□□□ -1.49
NUP42YDR192C ENV7Q12003 364 aa5.76□□□□□ -1.49
NUP42YDR192C RPL8AP17076 256 aaKnown RBP5.75□□□□□ -1.49
NUP42YDR192C RFA1P22336 621 aaKnown RBP5.75□□□□□ -1.49
NUP42YDR192C TOS1P38288 455 aa5.75□□□□□ -1.49
NUP42YDR192C COG8Q04632 607 aa5.75□□□□□ -1.49
NUP42YDR192C ADR1P07248 1323 aa5.74□□□□□ -1.49
NUP42YDR192C VBA3P25594 458 aa5.74□□□□□ -1.49
NUP42YDR192C CRP1P38845 465 aaKnown RBP5.74□□□□□ -1.49
NUP42YDR192C GYP8P43570 497 aa5.74□□□□□ -1.49
NUP42YDR192C PSP2P50109 593 aaKnown RBP5.74□□□□□ -1.49
NUP42YDR192C NOG2P53742 486 aaKnown RBP5.74□□□□□ -1.49
NUP42YDR192C DNM1P54861 757 aa5.74□□□□□ -1.49
NUP42YDR192C MSC2Q03455 724 aa5.74□□□□□ -1.49
NUP42YDR192C LPX1Q12405 387 aaKnown RBP5.74□□□□□ -1.49
Retrieved 100 of 5,963 RNA–protein pairs in 989.9 ms