RNA–Protein interactions for RNA: YDL078C

MDH3, Transcript of Peroxisomal malate dehydrogenase, yeastyeast

Gene MDH3, Length 1,032 nt, Biotype protein coding, Subcellular localisation Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MDH3YDL078C FOB1O13329 566 aa6.32□□□□□ -1.4
MDH3YDL078C WHI2P12611 486 aa6.32□□□□□ -1.4
MDH3YDL078C CAD1P24813 409 aaKnown RBP6.32□□□□□ -1.4
MDH3YDL078C RDS1P25611 832 aa6.32□□□□□ -1.4
MDH3YDL078C URA1P28272 314 aaPredicted RBP6.32□□□□□ -1.4
MDH3YDL078C VPS24P36095 224 aaKnown RBP6.32□□□□□ -1.4
MDH3YDL078C DRE2P36152 348 aa6.32□□□□□ -1.4
MDH3YDL078C PIH1P38768 344 aa6.32□□□□□ -1.4
MDH3YDL078C YMR124WP39523 943 aaKnown RBP6.32□□□□□ -1.4
MDH3YDL078C THI6P41835 540 aa6.32□□□□□ -1.4
MDH3YDL078C SAD1P43589 448 aa6.32□□□□□ -1.4
MDH3YDL078C UBA2P52488 636 aa6.32□□□□□ -1.4
MDH3YDL078C MUK1Q02866 612 aa6.32□□□□□ -1.4
MDH3YDL078C ADY4Q05955 493 aa6.32□□□□□ -1.4
MDH3YDL078C MAG2Q06436 670 aaKnown RBP6.32□□□□□ -1.4
MDH3YDL078C RRP15Q06511 250 aaPredicted RBP6.32□□□□□ -1.4
MDH3YDL078C NOC3Q07896 663 aaPredicted RBP6.32□□□□□ -1.4
MDH3YDL078C YEL076C-AP0CX16 216 aa6.31□□□□□ -1.4
MDH3YDL078C YLR464WP0CX17 216 aa6.31□□□□□ -1.4
MDH3YDL078C TIF1P10081 395 aaKnown RBP6.31□□□□□ -1.4
MDH3YDL078C DBP5P20449 482 aaKnown RBP6.31□□□□□ -1.4
MDH3YDL078C TOA1P32773 286 aa6.31□□□□□ -1.4
MDH3YDL078C COT1P32798 439 aa6.31□□□□□ -1.4
MDH3YDL078C SWE1P32944 819 aa6.31□□□□□ -1.4
MDH3YDL078C VPS35P34110 944 aa6.31□□□□□ -1.4
MDH3YDL078C PET10P36139 283 aa6.31□□□□□ -1.4
MDH3YDL078C NAB3P38996 802 aaKnown RBP RIP-Chip data6.31□□□□□ -1.4not detected
MDH3YDL078C YEL076CP39971 216 aa6.31□□□□□ -1.4
MDH3YDL078C GCV2P49095 1034 aa6.31□□□□□ -1.4
MDH3YDL078C CDC73Q06697 393 aa6.31□□□□□ -1.4
MDH3YDL078C APL5Q08951 932 aaKnown RBP6.31□□□□□ -1.4
MDH3YDL078C OSW2Q12202 724 aa6.31□□□□□ -1.4
MDH3YDL078C HIS4P00815 799 aaKnown RBP6.3□□□□□ -1.4
MDH3YDL078C MSD1P15179 658 aaKnown RBP6.3□□□□□ -1.4
MDH3YDL078C PFK1P16861 987 aaKnown RBP6.3□□□□□ -1.4
MDH3YDL078C RPC53P25441 422 aa6.3□□□□□ -1.4
MDH3YDL078C MSP1P28737 362 aa6.3□□□□□ -1.4
MDH3YDL078C DPH2P32461 534 aa6.3□□□□□ -1.4
MDH3YDL078C TMT1P32643 299 aa6.3□□□□□ -1.4
MDH3YDL078C ALT2P52892 507 aa6.3□□□□□ -1.4
MDH3YDL078C CAF130P53280 1122 aaPredicted RBP6.3□□□□□ -1.4
MDH3YDL078C RTT102P53330 157 aa6.3□□□□□ -1.4
MDH3YDL078C YNL134CP53912 376 aaKnown RBP6.3□□□□□ -1.4
MDH3YDL078C SEC5P89102 971 aa6.3□□□□□ -1.4
MDH3YDL078C VPS60Q03390 229 aa6.3□□□□□ -1.4
MDH3YDL078C YPR109WQ06104 294 aa6.3□□□□□ -1.4
MDH3YDL078C PCD1Q12524 340 aa6.3□□□□□ -1.4
MDH3YDL078C PCT1P13259 424 aa6.29□□□□□ -1.4
MDH3YDL078C IDI1P15496 288 aa6.29□□□□□ -1.4
MDH3YDL078C ADE2P21264 571 aaKnown RBP6.29□□□□□ -1.4
MDH3YDL078C ISY1P21374 235 aaPredicted RBP6.29□□□□□ -1.4
MDH3YDL078C CLB1P24868 471 aa6.29□□□□□ -1.4
MDH3YDL078C BMH1P29311 267 aaKnown RBP6.29□□□□□ -1.4
MDH3YDL078C CDC11P32458 415 aa6.29□□□□□ -1.4
MDH3YDL078C SPT16P32558 1035 aaKnown RBP6.29□□□□□ -1.4
MDH3YDL078C SAP190P36123 1033 aa6.29□□□□□ -1.4
MDH3YDL078C MED8P38304 223 aa6.29□□□□□ -1.4
MDH3YDL078C SLX1P38324 304 aa6.29□□□□□ -1.4
MDH3YDL078C YAP1801P38856 637 aa6.29□□□□□ -1.4
MDH3YDL078C ECM1P39715 212 aa6.29□□□□□ -1.4
MDH3YDL078C BUD16P39988 312 aa6.29□□□□□ -1.4
MDH3YDL078C VTC2P43585 828 aa6.29□□□□□ -1.4
MDH3YDL078C AVT1P47082 602 aa6.29□□□□□ -1.4
MDH3YDL078C CUE3P53137 624 aaKnown RBP6.29□□□□□ -1.4
MDH3YDL078C GUP1P53154 560 aa6.29□□□□□ -1.4
MDH3YDL078C NIS1P53939 407 aa6.29□□□□□ -1.4
MDH3YDL078C HAP5Q02516 242 aa6.29□□□□□ -1.4
MDH3YDL078C EMI2Q04409 500 aaKnown RBP6.29□□□□□ -1.4
MDH3YDL078C COG8Q04632 607 aa6.29□□□□□ -1.4
MDH3YDL078C HRQ1Q05549 1077 aa6.29□□□□□ -1.4
MDH3YDL078C ESC2Q06340 456 aa6.29□□□□□ -1.4
MDH3YDL078C CUR1Q06469 252 aa6.29□□□□□ -1.4
MDH3YDL078C IES4Q08561 116 aa6.29□□□□□ -1.4
MDH3YDL078C NOP14Q99207 810 aaKnown RBP6.29□□□□□ -1.4
MDH3YDL078C NHA1Q99271 985 aa6.29□□□□□ -1.4
MDH3YDL078C HSC82P15108 705 aaKnown RBP6.28□□□□□ -1.4
MDH3YDL078C DEP1P31385 405 aa6.28□□□□□ -1.4
MDH3YDL078C SKG6P32900 734 aaPredicted RBP6.28□□□□□ -1.4
MDH3YDL078C RRP14P36080 434 aaKnown RBP6.28□□□□□ -1.4
MDH3YDL078C PGM2P37012 569 aaKnown RBP6.28□□□□□ -1.4
MDH3YDL078C UBP13P38187 747 aa6.28□□□□□ -1.4
MDH3YDL078C RFT1P38206 574 aaPredicted RBP6.28□□□□□ -1.4
MDH3YDL078C YHL026CP38740 315 aa6.28□□□□□ -1.4
MDH3YDL078C ESL1P40456 1118 aa6.28□□□□□ -1.4
MDH3YDL078C OPT1P40897 799 aa6.28□□□□□ -1.4
MDH3YDL078C LAM5P43560 674 aa6.28□□□□□ -1.4
MDH3YDL078C MET13P53128 600 aa6.28□□□□□ -1.4
MDH3YDL078C TPO2P53283 614 aa6.28□□□□□ -1.4
MDH3YDL078C YNL146WP53906 100 aa6.28□□□□□ -1.4
MDH3YDL078C ARK1P53974 638 aa6.28□□□□□ -1.4
MDH3YDL078C HEH2Q03281 663 aa6.28□□□□□ -1.4
MDH3YDL078C DOT1Q04089 582 aaKnown RBP6.28□□□□□ -1.4
MDH3YDL078C ERV41Q04651 352 aa6.28□□□□□ -1.4
MDH3YDL078C YLR455WQ06188 304 aa6.28□□□□□ -1.4
MDH3YDL078C PCK1P10963 549 aa6.27□□□□□ -1.41
MDH3YDL078C POL3P15436 1097 aa6.27□□□□□ -1.41
MDH3YDL078C RAD51P25454 400 aa6.27□□□□□ -1.41
MDH3YDL078C NAM7P30771 971 aaKnown RBP6.27□□□□□ -1.41
MDH3YDL078C YSC83P32792 385 aa6.27□□□□□ -1.41
MDH3YDL078C MRPL7P36519 292 aa6.27□□□□□ -1.41
Retrieved 100 of 5,963 RNA–protein pairs in 99.6 ms