RNA–Protein interactions for RNA: YBL067C

UBP13, Transcript of Ubiquitin-specific protease that cleaves Ub-protein fusions, yeast

Gene UBP13, Length 2,244 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBP13	YBL067C	PCL7	P40186	285 aa		7.75	□□□□□ -1.17
UBP13	YBL067C	NTA1	P40354	457 aa		7.75	□□□□□ -1.17
UBP13	YBL067C	GYP1	Q08484	637 aa		7.75	□□□□□ -1.17
UBP13	YBL067C	SAC3	P46674	1301 aa		7.75	□□□□□ -1.17
UBP13	YBL067C	SIS1	P25294	352 aa	Known RBP	7.74	□□□□□ -1.17
UBP13	YBL067C	MLS1	P30952	554 aa		7.74	□□□□□ -1.17
UBP13	YBL067C	NUD1	P32336	851 aa		7.74	□□□□□ -1.17
UBP13	YBL067C	SAH1	P39954	449 aa	Known RBP	7.74	□□□□□ -1.17
UBP13	YBL067C	FMP10	P40098	244 aa		7.74	□□□□□ -1.17
UBP13	YBL067C	PSY2	P40164	858 aa		7.74	□□□□□ -1.17
UBP13	YBL067C	GZF3	P42944	551 aa	Known RBP	7.74	□□□□□ -1.17
UBP13	YBL067C	YPL071C	Q02864	156 aa		7.74	□□□□□ -1.17
UBP13	YBL067C	NFI1	Q12216	726 aa		7.74	□□□□□ -1.17
UBP13	YBL067C	CPA2	P03965	1118 aa	Known RBP	7.74	□□□□□ -1.17
UBP13	YBL067C	SNF1	P06782	633 aa	Known RBP	7.74	□□□□□ -1.17
UBP13	YBL067C	MSN1	P22148	382 aa		7.74	□□□□□ -1.17
UBP13	YBL067C	TRX1	P22217	103 aa	Known RBP	7.74	□□□□□ -1.17
UBP13	YBL067C	POT1	P27796	417 aa	Known RBP RIP-Chip data	7.74	□□□□□ -1.17	not detected
UBP13	YBL067C	NAS2	P40555	220 aa		7.74	□□□□□ -1.17
UBP13	YBL067C	YER152C	P10356	443 aa		7.73	□□□□□ -1.17
UBP13	YBL067C	GUK1	P15454	187 aa	Known RBP	7.73	□□□□□ -1.17
UBP13	YBL067C	PDX1	P16451	410 aa		7.73	□□□□□ -1.17
UBP13	YBL067C	THR1	P17423	357 aa	Known RBP	7.73	□□□□□ -1.17
UBP13	YBL067C	CDC48	P25694	835 aa	Known RBP	7.73	□□□□□ -1.17
UBP13	YBL067C	NPR2	P39923	615 aa		7.73	□□□□□ -1.17
UBP13	YBL067C	YCK3	P39962	524 aa		7.73	□□□□□ -1.17
UBP13	YBL067C	TOK1	P40310	691 aa		7.73	□□□□□ -1.17
UBP13	YBL067C	YMR155W	Q03795	547 aa		7.73	□□□□□ -1.17
UBP13	YBL067C	GSF2	Q04697	403 aa	Known RBP	7.73	□□□□□ -1.17
UBP13	YBL067C	COX11	P19516	300 aa	Known RBP	7.72	□□□□□ -1.17
UBP13	YBL067C	SPC72	P39723	622 aa		7.72	□□□□□ -1.17
UBP13	YBL067C	POL31	P46957	487 aa		7.72	□□□□□ -1.17
UBP13	YBL067C	AIM14	P53109	570 aa		7.72	□□□□□ -1.17
UBP13	YBL067C	YGL140C	P53120	1219 aa		7.72	□□□□□ -1.17
UBP13	YBL067C	YPQ2	Q06328	317 aa		7.72	□□□□□ -1.17
UBP13	YBL067C	VMA2	P16140	517 aa	Known RBP	7.72	□□□□□ -1.17
UBP13	YBL067C	RRP7	P25368	297 aa	Predicted RBP	7.72	□□□□□ -1.17
UBP13	YBL067C	NAB2	P32505	525 aa	Known RBP RIP-Chip data	7.72	□□□□□ -1.17	not detected
UBP13	YBL067C	HSM3	P38348	480 aa		7.72	□□□□□ -1.17
UBP13	YBL067C	MNN11	P46985	422 aa	Known RBP	7.72	□□□□□ -1.17
UBP13	YBL067C	HAL9	Q12180	1030 aa		7.72	□□□□□ -1.17
UBP13	YBL067C	RMP1	Q12530	201 aa		7.72	□□□□□ -1.17
UBP13	YBL067C	SEC23	P15303	768 aa	Known RBP	7.71	□□□□□ -1.17
UBP13	YBL067C	HXT6	P39003	570 aa	Known RBP	7.71	□□□□□ -1.17
UBP13	YBL067C	HXT7	P39004	570 aa		7.71	□□□□□ -1.17
UBP13	YBL067C	GUP1	P53154	560 aa		7.71	□□□□□ -1.17
UBP13	YBL067C	SPO1	P53541	631 aa		7.71	□□□□□ -1.17
UBP13	YBL067C	CPR6	P53691	371 aa	Known RBP	7.71	□□□□□ -1.17
UBP13	YBL067C	CNM67	P53865	581 aa	Known RBP	7.71	□□□□□ -1.17
UBP13	YBL067C	EAR1	Q03212	550 aa		7.71	□□□□□ -1.17
UBP13	YBL067C	TRM8	Q12009	286 aa		7.71	□□□□□ -1.17
UBP13	YBL067C	INO1	P11986	533 aa		7.71	□□□□□ -1.18
UBP13	YBL067C	NCP1	P16603	691 aa	Known RBP	7.71	□□□□□ -1.18
UBP13	YBL067C	PHO81	P17442	1178 aa		7.71	□□□□□ -1.18
UBP13	YBL067C	MRPL25	P23369	157 aa		7.71	□□□□□ -1.18
UBP13	YBL067C	ECM2	P38241	364 aa	Known RBP	7.71	□□□□□ -1.18
UBP13	YBL067C	YBR225W	P38321	900 aa		7.71	□□□□□ -1.18
UBP13	YBL067C	YLF2	P38746	405 aa		7.71	□□□□□ -1.18
UBP13	YBL067C	PAC1	P39946	494 aa	Known RBP	7.71	□□□□□ -1.18
UBP13	YBL067C	AGX1	P43567	385 aa		7.71	□□□□□ -1.18
UBP13	YBL067C	FOL2	P51601	243 aa	Known RBP	7.71	□□□□□ -1.18
UBP13	YBL067C	BLS1	Q06071	122 aa		7.71	□□□□□ -1.18
UBP13	YBL067C	CLP1	Q08685	445 aa	Predicted RBP	7.71	□□□□□ -1.18
UBP13	YBL067C	PRP9	P19736	530 aa	Known RBP	7.7	□□□□□ -1.18
UBP13	YBL067C	ERT1	P38140	529 aa		7.7	□□□□□ -1.18
UBP13	YBL067C	KAP123	P40069	1113 aa	Known RBP	7.7	□□□□□ -1.18
UBP13	YBL067C	UBP10	P53874	792 aa	Predicted RBP	7.7	□□□□□ -1.18
UBP13	YBL067C	ERV25	P54837	211 aa	Known RBP	7.7	□□□□□ -1.18
UBP13	YBL067C	TIF35	Q04067	274 aa	Known RBP	7.7	□□□□□ -1.18
UBP13	YBL067C	PHO92	Q06390	306 aa		7.7	□□□□□ -1.18
UBP13	YBL067C	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	7.7	□□□□□ -1.18	not detected
UBP13	YBL067C	RPP1B	P10622	106 aa	Known RBP	7.7	□□□□□ -1.18
UBP13	YBL067C	IRS4	P36115	615 aa	Known RBP	7.7	□□□□□ -1.18
UBP13	YBL067C	VPS53	P47061	822 aa		7.7	□□□□□ -1.18
UBP13	YBL067C	YGR153W	P48238	217 aa		7.7	□□□□□ -1.18
UBP13	YBL067C	PHM7	Q12252	991 aa		7.7	□□□□□ -1.18
UBP13	YBL067C	MET17	P06106	444 aa		7.69	□□□□□ -1.18
UBP13	YBL067C	HLR1	Q04429	423 aa		7.69	□□□□□ -1.18
UBP13	YBL067C	MFB1	Q04922	465 aa		7.69	□□□□□ -1.18
UBP13	YBL067C	MDM38	Q08179	573 aa		7.69	□□□□□ -1.18
UBP13	YBL067C	ATP12	P22135	325 aa		7.68	□□□□□ -1.18
UBP13	YBL067C	ARB1	P40024	610 aa	Known RBP	7.68	□□□□□ -1.18
UBP13	YBL067C	CCT5	P40413	562 aa	Known RBP	7.68	□□□□□ -1.18
UBP13	YBL067C	TAN1	P53072	289 aa	Predicted RBP	7.68	□□□□□ -1.18
UBP13	YBL067C	SHE10	P53075	577 aa		7.68	□□□□□ -1.18
UBP13	YBL067C	YNL165W	P53891	406 aa		7.68	□□□□□ -1.18
UBP13	YBL067C	PTA1	Q01329	785 aa	Predicted RBP	7.68	□□□□□ -1.18
UBP13	YBL067C	ROD1	Q02805	837 aa		7.68	□□□□□ -1.18
UBP13	YBL067C	DBP9	Q06218	594 aa	Known RBP	7.68	□□□□□ -1.18
UBP13	YBL067C	ATG33	Q06485	197 aa		7.68	□□□□□ -1.18
UBP13	YBL067C	STF1	P01098	86 aa		7.68	□□□□□ -1.18
UBP13	YBL067C	HMG1	P12683	1054 aa		7.68	□□□□□ -1.18
UBP13	YBL067C	SED4	P25365	1065 aa		7.68	□□□□□ -1.18
UBP13	YBL067C	RME1	P32338	300 aa	Known RBP	7.68	□□□□□ -1.18
UBP13	YBL067C	RDH54	P38086	958 aa		7.68	□□□□□ -1.18
UBP13	YBL067C	GND1	P38720	489 aa	Known RBP	7.68	□□□□□ -1.18
UBP13	YBL067C	BFR1	P38934	470 aa	Known RBP RIP-Chip data	7.68	□□□□□ -1.18	not detected
UBP13	YBL067C	YEL023C	P39992	682 aa		7.68	□□□□□ -1.18
UBP13	YBL067C	SIP5	P40210	489 aa	Known RBP	7.68	□□□□□ -1.18
UBP13	YBL067C	RAD26	P40352	1085 aa		7.68	□□□□□ -1.18

Retrieved 100 of 5,963 RNA–protein pairs in 250.7 ms