RNA–Protein interactions for RNA: YBL006C

LDB7, Transcript of Component of the RSC chromatin remodeling complex, yeastyeast

Gene LDB7, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LDB7YBL006C IRA2P19158 3079 aa7.6□□□□□ -1.19
LDB7YBL006C SCP160P06105 1222 aaKnown RBP RIP-Chip data7.6□□□□□ -1.19not detected
LDB7YBL006C KEX2P13134 814 aa7.6□□□□□ -1.19
LDB7YBL006C RAM2P29703 316 aa7.6□□□□□ -1.19
LDB7YBL006C YEL023CP39992 682 aa7.6□□□□□ -1.19
LDB7YBL006C YER186CP40101 306 aa7.6□□□□□ -1.19
LDB7YBL006C TRS130Q03660 1102 aa7.6□□□□□ -1.19
LDB7YBL006C DNL4Q08387 944 aaPredicted RBP7.6□□□□□ -1.19
LDB7YBL006C LAA1P39526 2014 aa7.59□□□□□ -1.19
LDB7YBL006C FOB1O13329 566 aa7.59□□□□□ -1.19
LDB7YBL006C HIS4P00815 799 aaKnown RBP7.59□□□□□ -1.19
LDB7YBL006C PEX1P24004 1043 aa7.59□□□□□ -1.19
LDB7YBL006C PPZ1P26570 692 aa7.59□□□□□ -1.19
LDB7YBL006C COQ8P27697 501 aa7.59□□□□□ -1.19
LDB7YBL006C NAM7P30771 971 aaKnown RBP7.59□□□□□ -1.19
LDB7YBL006C MNN4P36044 1178 aa7.59□□□□□ -1.19
LDB7YBL006C MAL33P38157 468 aa7.59□□□□□ -1.19
LDB7YBL006C HUL4P40985 892 aa7.59□□□□□ -1.19
LDB7YBL006C MAF1P41910 395 aa7.59□□□□□ -1.19
LDB7YBL006C NPA3P47122 385 aa7.59□□□□□ -1.19
LDB7YBL006C TOF1P53840 1238 aa7.59□□□□□ -1.19
LDB7YBL006C VTC3Q02725 835 aa7.59□□□□□ -1.19
LDB7YBL006C RCR2Q03446 210 aaKnown RBP7.59□□□□□ -1.19
LDB7YBL006C CUR1Q06469 252 aa7.59□□□□□ -1.19
LDB7YBL006C MRI1Q06489 411 aaKnown RBP7.59□□□□□ -1.19
LDB7YBL006C MRN1Q08925 612 aaKnown RBP RIP-Chip data7.59□□□□□ -1.19not detected
LDB7YBL006C HXK1P04806 485 aaKnown RBP7.58□□□□□ -1.2
LDB7YBL006C SNF1P06782 633 aaKnown RBP7.58□□□□□ -1.2
LDB7YBL006C RPL4AP10664 362 aaKnown RBP7.58□□□□□ -1.2
LDB7YBL006C SSD1P24276 1250 aaKnown RBP RIP-Chip data7.58□□□□□ -1.2not detected
LDB7YBL006C PEX2P32800 271 aa7.58□□□□□ -1.2
LDB7YBL006C RAD54P32863 898 aa7.58□□□□□ -1.2
LDB7YBL006C VPS35P34110 944 aa7.58□□□□□ -1.2
LDB7YBL006C PRX1P34227 261 aaKnown RBP7.58□□□□□ -1.2
LDB7YBL006C RPL4BP49626 362 aaKnown RBP7.58□□□□□ -1.2
LDB7YBL006C ORC5P50874 479 aa7.58□□□□□ -1.2
LDB7YBL006C ALG11P53954 548 aaKnown RBP7.58□□□□□ -1.2
LDB7YBL006C EEB1Q02891 456 aa7.58□□□□□ -1.2
LDB7YBL006C YLR257WQ06146 321 aaKnown RBP7.58□□□□□ -1.2
LDB7YBL006C ESC8Q08119 714 aa7.58□□□□□ -1.2
LDB7YBL006C PUS1Q12211 544 aaKnown RBP7.58□□□□□ -1.2
LDB7YBL006C APE1P14904 514 aa7.57□□□□□ -1.2
LDB7YBL006C RGP1P16664 663 aa7.57□□□□□ -1.2
LDB7YBL006C CYS3P31373 394 aaKnown RBP7.57□□□□□ -1.2
LDB7YBL006C YEL1P34225 687 aa7.57□□□□□ -1.2
LDB7YBL006C HMT1P38074 348 aa7.57□□□□□ -1.2
LDB7YBL006C DSF2P38213 736 aa7.57□□□□□ -1.2
LDB7YBL006C MMS4P38257 691 aa7.57□□□□□ -1.2
LDB7YBL006C RIM4P38741 713 aa7.57□□□□□ -1.2
LDB7YBL006C PEX28P38848 579 aa7.57□□□□□ -1.2
LDB7YBL006C MOB1P40484 314 aa7.57□□□□□ -1.2
LDB7YBL006C ULI1P43604 169 aa7.57□□□□□ -1.2
LDB7YBL006C YGR130CP53278 816 aa7.57□□□□□ -1.2
LDB7YBL006C SEC5P89102 971 aa7.57□□□□□ -1.2
LDB7YBL006C COG8Q04632 607 aa7.57□□□□□ -1.2
LDB7YBL006C CDC53Q12018 815 aaKnown RBP7.57□□□□□ -1.2
LDB7YBL006C MNL2Q12205 849 aa7.57□□□□□ -1.2
LDB7YBL006C OSH2Q12451 1283 aa7.57□□□□□ -1.2
LDB7YBL006C HAP2P06774 265 aa7.56□□□□□ -1.2
LDB7YBL006C CIT2P08679 460 aa7.56□□□□□ -1.2
LDB7YBL006C PCK1P10963 549 aa7.56□□□□□ -1.2
LDB7YBL006C IMG2P25642 146 aaPredicted RBP7.56□□□□□ -1.2
LDB7YBL006C PPS1P38148 807 aa7.56□□□□□ -1.2
LDB7YBL006C UBP13P38187 747 aa7.56□□□□□ -1.2
LDB7YBL006C ASN1P49089 572 aaKnown RBP7.56□□□□□ -1.2
LDB7YBL006C SHE10P53075 577 aa7.56□□□□□ -1.2
LDB7YBL006C SHS1Q07657 551 aa7.56□□□□□ -1.2
LDB7YBL006C PLP2Q12017 286 aa7.56□□□□□ -1.2
LDB7YBL006C NUM1Q00402 2748 aa7.56□□□□□ -1.2
LDB7YBL006C ATP1P07251 545 aaKnown RBP7.55□□□□□ -1.2
LDB7YBL006C RDS1P25611 832 aa7.55□□□□□ -1.2
LDB7YBL006C TRM2P33753 639 aa7.55□□□□□ -1.2
LDB7YBL006C STB4P50104 949 aa7.55□□□□□ -1.2
LDB7YBL006C NUT1P53114 1132 aa7.55□□□□□ -1.2
LDB7YBL006C CUE3P53137 624 aaKnown RBP7.55□□□□□ -1.2
LDB7YBL006C ART5P53244 586 aaKnown RBP7.55□□□□□ -1.2
LDB7YBL006C SPC98P53540 846 aa7.55□□□□□ -1.2
LDB7YBL006C CWC21Q03375 135 aaKnown RBP7.55□□□□□ -1.2
LDB7YBL006C YML083CQ04526 418 aa7.55□□□□□ -1.2
LDB7YBL006C IRC10Q08118 586 aa7.55□□□□□ -1.2
LDB7YBL006C YPL277CQ08989 487 aa7.55□□□□□ -1.2
LDB7YBL006C SPE1P08432 466 aa7.54□□□□□ -1.2
LDB7YBL006C BET2P20133 325 aa7.54□□□□□ -1.2
LDB7YBL006C RAD27P26793 382 aa7.54□□□□□ -1.2
LDB7YBL006C PRR1P28708 518 aa7.54□□□□□ -1.2
LDB7YBL006C VTC2P43585 828 aa7.54□□□□□ -1.2
LDB7YBL006C PEX14P53112 341 aa7.54□□□□□ -1.2
LDB7YBL006C YDR344CQ05510 147 aa7.54□□□□□ -1.2
LDB7YBL006C SDH5Q08230 162 aa7.54□□□□□ -1.2
LDB7YBL006C RRD2Q12461 358 aa7.54□□□□□ -1.2
LDB7YBL006C PHO8P11491 566 aa7.53□□□□□ -1.2
LDB7YBL006C VPH1P32563 840 aaKnown RBP7.53□□□□□ -1.2
LDB7YBL006C YKL097CP34245 136 aa7.53□□□□□ -1.2
LDB7YBL006C YBR284WP38150 797 aa7.53□□□□□ -1.2
LDB7YBL006C PCM1P38628 557 aaKnown RBP7.53□□□□□ -1.2
LDB7YBL006C YTA12P40341 825 aa7.53□□□□□ -1.2
LDB7YBL006C SCD6P45978 349 aaKnown RBP RIP-Chip data7.53□□□□□ -1.2not detected
LDB7YBL006C NBP1P52919 319 aaPredicted RBP7.53□□□□□ -1.2
LDB7YBL006C STP1Q00947 519 aa7.53□□□□□ -1.2
LDB7YBL006C SNU56Q03782 492 aaKnown RBP7.53□□□□□ -1.2
Retrieved 100 of 5,963 RNA–protein pairs in 46.6 ms