RNA–Protein interactions for RNA: ENST00000640748.1

ERGIC3-220, Transcript of ERGIC and golgi 3, humanhuman

TSL 5 BASIC

Gene ERGIC3, Length 832 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-220ENST00000640748 FKBP4Q02790 459 aaKnown RBP eCLIP15.33■□□□□ 0.04
ERGIC3-220ENST00000640748 TAF1DQ9H5J8 278 aaPredicted RBP15.33■□□□□ 0.04
ERGIC3-220ENST00000640748 CREBZFQ9NS37 354 aa15.33■□□□□ 0.04
ERGIC3-220ENST00000640748 ABCC12Q96J65 1359 aa15.33■□□□□ 0.04
ERGIC3-220ENST00000640748 DLG5Q8TDM6 1919 aa15.33■□□□□ 0.04
ERGIC3-220ENST00000640748 CRY2Q49AN0 593 aa15.32■□□□□ 0.04
ERGIC3-220ENST00000640748 PASKQ96RG2 1323 aa15.32■□□□□ 0.04
ERGIC3-220ENST00000640748 LAMB4A4D0S4 1761 aa15.31■□□□□ 0.04
ERGIC3-220ENST00000640748 RRP1P56182 461 aaKnown RBP15.31■□□□□ 0.04
ERGIC3-220ENST00000640748 EIF4A1P60842 406 aaKnown RBP15.31■□□□□ 0.04
ERGIC3-220ENST00000640748 TNS4Q8IZW8 715 aa15.31■□□□□ 0.04
ERGIC3-220ENST00000640748 THUMPD2Q9BTF0 503 aaKnown RBP15.31■□□□□ 0.04
ERGIC3-220ENST00000640748 KDM3BQ7LBC6 1761 aa15.31■□□□□ 0.04
ERGIC3-220ENST00000640748 IQCA1LA6NCM1 817 aa15.3■□□□□ 0.04
ERGIC3-220ENST00000640748 ERVV-1B6SEH8 477 aa15.3■□□□□ 0.04
ERGIC3-220ENST00000640748 RIPK4P57078 832 aa15.3■□□□□ 0.04
ERGIC3-220ENST00000640748 TTLL7Q6ZT98 887 aa15.3■□□□□ 0.04
ERGIC3-220ENST00000640748 SLC51AQ86UW1 340 aa15.3■□□□□ 0.04
ERGIC3-220ENST00000640748 LDHDQ86WU2 507 aa15.3■□□□□ 0.04
ERGIC3-220ENST00000640748 NUTM1Q86Y26 1132 aa15.3■□□□□ 0.04
ERGIC3-220ENST00000640748 RTKN2Q8IZC4 609 aa15.3■□□□□ 0.04
ERGIC3-220ENST00000640748 SPINK5Q9NQ38 1064 aaPredicted RBP15.3■□□□□ 0.04
ERGIC3-220ENST00000640748 MKRN1Q9UHC7 482 aaKnown RBP15.3■□□□□ 0.04
ERGIC3-220ENST00000640748 SCN4AP35499 1836 aa15.29■□□□□ 0.04
ERGIC3-220ENST00000640748 COL4A5P29400 1685 aa15.29■□□□□ 0.04
ERGIC3-220ENST00000640748 MAP3K15Q6ZN16 1313 aa15.29■□□□□ 0.04
ERGIC3-220ENST00000640748 UBN2Q6ZU65 1347 aa15.29■□□□□ 0.04
ERGIC3-220ENST00000640748 FZD9O00144 591 aa15.29■□□□□ 0.04
ERGIC3-220ENST00000640748 ITGBL1O95965 494 aaPredicted RBP15.29■□□□□ 0.04
ERGIC3-220ENST00000640748 NFE2L2Q16236 605 aa15.29■□□□□ 0.04
ERGIC3-220ENST00000640748 ADAMTSL1Q8N6G6 1762 aa15.29■□□□□ 0.04
ERGIC3-220ENST00000640748 CNTNAP1P78357 1384 aa15.28■□□□□ 0.04
ERGIC3-220ENST00000640748 IL16Q14005 1332 aa15.28■□□□□ 0.04
ERGIC3-220ENST00000640748 ALDH1B1P30837 517 aa15.28■□□□□ 0.04
ERGIC3-220ENST00000640748 IARSP41252 1262 aaKnown RBP15.28■□□□□ 0.04
ERGIC3-220ENST00000640748 SYNE4Q8N205 404 aa15.28■□□□□ 0.04
ERGIC3-220ENST00000640748 MYH16Q9H6N6 1097 aa15.28■□□□□ 0.04
ERGIC3-220ENST00000640748 TRIM35Q9UPQ4 493 aa15.28■□□□□ 0.04
ERGIC3-220ENST00000640748 CAPN15O75808 1086 aa15.27■□□□□ 0.04
ERGIC3-220ENST00000640748 PPP4R2Q9NY27 417 aa15.27■□□□□ 0.04
ERGIC3-220ENST00000640748 RIC1Q4ADV7 1423 aa15.26■□□□□ 0.03
ERGIC3-220ENST00000640748 IBTKQ9P2D0 1353 aaPredicted RBP15.26■□□□□ 0.03
ERGIC3-220ENST00000640748 GPTP24298 496 aa15.26■□□□□ 0.03
ERGIC3-220ENST00000640748 GTF2E1P29083 439 aaPredicted RBP15.26■□□□□ 0.03
ERGIC3-220ENST00000640748 HOXA10P31260 410 aaPredicted RBP15.26■□□□□ 0.03
ERGIC3-220ENST00000640748 LMOD3Q0VAK6 560 aa15.26■□□□□ 0.03
ERGIC3-220ENST00000640748 SUSD4Q5VX71 490 aa15.26■□□□□ 0.03
ERGIC3-220ENST00000640748 C3orf67Q6ZVT6 689 aa15.26■□□□□ 0.03
ERGIC3-220ENST00000640748 LRP10Q7Z4F1 713 aa15.26■□□□□ 0.03
ERGIC3-220ENST00000640748 ZNF34Q8IZ26 560 aa15.26■□□□□ 0.03
ERGIC3-220ENST00000640748 PSMD1Q99460 953 aa15.26■□□□□ 0.03
ERGIC3-220ENST00000640748 NYXQ9GZU5 481 aa15.26■□□□□ 0.03
ERGIC3-220ENST00000640748 HACL1Q9UJ83 578 aa15.26■□□□□ 0.03
ERGIC3-220ENST00000640748 NUP98P52948 1817 aa15.26■□□□□ 0.03
ERGIC3-220ENST00000640748 MYL6BP14649 208 aa15.25■□□□□ 0.03
ERGIC3-220ENST00000640748 EPHX2P34913 555 aa15.25■□□□□ 0.03
ERGIC3-220ENST00000640748 EAPPQ56P03 285 aaPredicted RBP15.25■□□□□ 0.03
ERGIC3-220ENST00000640748 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.25■□□□□ 0.03
ERGIC3-220ENST00000640748 ZBTB3Q9H5J0 574 aa15.25■□□□□ 0.03
ERGIC3-220ENST00000640748 NTSR2O95665 410 aa15.24■□□□□ 0.03
ERGIC3-220ENST00000640748 CALD1Q05682 793 aaKnown RBP15.24■□□□□ 0.03
ERGIC3-220ENST00000640748 PDIA6Q15084 440 aa15.24■□□□□ 0.03
ERGIC3-220ENST00000640748 KIF6Q6ZMV9 814 aa15.24■□□□□ 0.03
ERGIC3-220ENST00000640748 GPC2Q8N158 579 aa15.24■□□□□ 0.03
ERGIC3-220ENST00000640748 LTBP1Q14766 1721 aa15.23■□□□□ 0.03
ERGIC3-220ENST00000640748 TMEM88BA6NKF7 163 aa15.23■□□□□ 0.03
ERGIC3-220ENST00000640748 FOXN1O15353 648 aa15.23■□□□□ 0.03
ERGIC3-220ENST00000640748 VEGFBP49765 207 aa15.23■□□□□ 0.03
ERGIC3-220ENST00000640748 MAP1SQ66K74 1059 aaPredicted RBP15.23■□□□□ 0.03
ERGIC3-220ENST00000640748 CC2D2BQ6DHV5 1058 aa15.23■□□□□ 0.03
ERGIC3-220ENST00000640748 GIGYF2Q6Y7W6 1299 aaKnown RBP15.23■□□□□ 0.03
ERGIC3-220ENST00000640748 ERBB4Q15303 1308 aa15.22■□□□□ 0.03
ERGIC3-220ENST00000640748 PROSER3Q2NL68 480 aa15.22■□□□□ 0.03
ERGIC3-220ENST00000640748 PNMA8AQ86V59 439 aaPredicted RBP15.22■□□□□ 0.03
ERGIC3-220ENST00000640748 CNTROBQ8N137 903 aa15.22■□□□□ 0.03
ERGIC3-220ENST00000640748 RPGRQ92834 1020 aaKnown RBP15.22■□□□□ 0.03
ERGIC3-220ENST00000640748 CRAMP1Q96RY5 1269 aa15.22■□□□□ 0.03
ERGIC3-220ENST00000640748 SCNN1DP51172 638 aa15.21■□□□□ 0.03
ERGIC3-220ENST00000640748 JDP2Q8WYK2 163 aa15.21■□□□□ 0.03
ERGIC3-220ENST00000640748 CT47B1P0C2W7 299 aaPredicted RBP15.2■□□□□ 0.02
ERGIC3-220ENST00000640748 RBM17Q96I25 401 aaKnown RBP15.2■□□□□ 0.02
ERGIC3-220ENST00000640748 TSPYL4Q9UJ04 414 aa15.2■□□□□ 0.02
ERGIC3-220ENST00000640748 CLEC11AQ9Y240 323 aa15.2■□□□□ 0.02
ERGIC3-220ENST00000640748 FANCIQ9NVI1 1328 aa15.19■□□□□ 0.02
ERGIC3-220ENST00000640748 RASSF10A6NK89 507 aa15.19■□□□□ 0.02
ERGIC3-220ENST00000640748 PPEF1O14829 653 aaPredicted RBP15.19■□□□□ 0.02
ERGIC3-220ENST00000640748 ANXA1P04083 346 aa15.19■□□□□ 0.02
ERGIC3-220ENST00000640748 GRIPAP1Q4V328 841 aa15.19■□□□□ 0.02
ERGIC3-220ENST00000640748 SLC10A5Q5PT55 438 aa15.19■□□□□ 0.02
ERGIC3-220ENST00000640748 GJA3Q9Y6H8 435 aa15.19■□□□□ 0.02
ERGIC3-220ENST00000640748 TCERG1O14776 1098 aaKnown RBP15.18■□□□□ 0.02
ERGIC3-220ENST00000640748 PLIN1O60240 522 aa15.18■□□□□ 0.02
ERGIC3-220ENST00000640748 EPS15P42566 896 aa15.18■□□□□ 0.02
ERGIC3-220ENST00000640748 EIF6P56537 245 aaKnown RBP15.18■□□□□ 0.02
ERGIC3-220ENST00000640748 FMR1Q06787 632 aaKnown RBP eCLIP15.18■□□□□ 0.02
ERGIC3-220ENST00000640748 PARP10Q53GL7 1025 aa15.18■□□□□ 0.02
ERGIC3-220ENST00000640748 LARGE2Q8N3Y3 721 aa15.18■□□□□ 0.02
ERGIC3-220ENST00000640748 WBP1LQ9NX94 342 aa15.18■□□□□ 0.02
ERGIC3-220ENST00000640748 EIF2S2P20042 333 aaKnown RBP15.17■□□□□ 0.02
ERGIC3-220ENST00000640748 GNAI1P63096 354 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms