RNA–Protein interactions for RNA: ENST00000638409.1

SCARB2-209, Transcript of scavenger receptor class B member 2, humanhuman

Gene SCARB2, Length 2,753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-209ENST00000638409 PRSS12P56730 875 aa10.11□□□□□ -0.79
SCARB2-209ENST00000638409 XPCQ01831 940 aaPredicted RBP10.11□□□□□ -0.79
SCARB2-209ENST00000638409 ZNF394Q53GI3 561 aa10.11□□□□□ -0.79
SCARB2-209ENST00000638409 WWC3Q9ULE0 1092 aa10.11□□□□□ -0.79
SCARB2-209ENST00000638409 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.11□□□□□ -0.79
SCARB2-209ENST00000638409 ADGRB2O60241 1585 aa10.11□□□□□ -0.79
SCARB2-209ENST00000638409 ATP5J2-PTCD1G3V325 749 aa10.11□□□□□ -0.79
SCARB2-209ENST00000638409 SPOCK3Q9BQ16 436 aa10.11□□□□□ -0.79
SCARB2-209ENST00000638409 PRR12Q9ULL5 1215 aa10.11□□□□□ -0.79
SCARB2-209ENST00000638409 PLEKHH1Q9ULM0 1364 aa10.11□□□□□ -0.79
SCARB2-209ENST00000638409 CDC42BPGQ6DT37 1551 aa10.11□□□□□ -0.79
SCARB2-209ENST00000638409 C6orf229H3BNL8 230 aa10.1□□□□□ -0.79
SCARB2-209ENST00000638409 COL19A1Q14993 1142 aa10.1□□□□□ -0.79
SCARB2-209ENST00000638409 WAPLQ7Z5K2 1190 aa10.1□□□□□ -0.79
SCARB2-209ENST00000638409 TRAK1Q9UPV9 953 aa10.1□□□□□ -0.79
SCARB2-209ENST00000638409 ZNF76P36508 570 aa10.1□□□□□ -0.79
SCARB2-209ENST00000638409 HSP90AB4PQ58FF6 505 aa10.1□□□□□ -0.79
SCARB2-209ENST00000638409 PRAM1Q96QH2 718 aa10.1□□□□□ -0.79
SCARB2-209ENST00000638409 PURBQ96QR8 312 aaKnown RBP10.1□□□□□ -0.79
SCARB2-209ENST00000638409 MAPK8P45983 427 aa10.09□□□□□ -0.79
SCARB2-209ENST00000638409 PDE3BQ13370 1112 aa10.09□□□□□ -0.79
SCARB2-209ENST00000638409 TOM1O60784 492 aa10.09□□□□□ -0.79
SCARB2-209ENST00000638409 FKBP4Q02790 459 aaKnown RBP eCLIP10.09□□□□□ -0.79
SCARB2-209ENST00000638409 TSGA10IPQ3SY00 556 aa10.09□□□□□ -0.79
SCARB2-209ENST00000638409 ARMC5Q96C12 935 aa10.09□□□□□ -0.79
SCARB2-209ENST00000638409 VTI1BQ9UEU0 232 aa10.09□□□□□ -0.79
SCARB2-209ENST00000638409 HSP90AB2PQ58FF8 381 aa10.09□□□□□ -0.79
SCARB2-209ENST00000638409 RNF187Q5TA31 235 aaPredicted RBP10.09□□□□□ -0.79
SCARB2-209ENST00000638409 YTHDC1Q96MU7 727 aaKnown RBP10.09□□□□□ -0.79
SCARB2-209ENST00000638409 FBXO41Q8TF61 875 aa10.08□□□□□ -0.8
SCARB2-209ENST00000638409 CARD11Q9BXL7 1154 aa10.08□□□□□ -0.8
SCARB2-209ENST00000638409 BMP2KQ9NSY1 1161 aaPredicted RBP10.08□□□□□ -0.8
SCARB2-209ENST00000638409 POGKQ9P215 609 aa10.08□□□□□ -0.8
SCARB2-209ENST00000638409 EIF3AQ14152 1382 aaKnown RBP10.08□□□□□ -0.8
SCARB2-209ENST00000638409 SORBS3O60504 671 aa10.08□□□□□ -0.8
SCARB2-209ENST00000638409 LDHBP07195 334 aaKnown RBP10.08□□□□□ -0.8
SCARB2-209ENST00000638409 RACK1P63244 317 aaKnown RBP10.08□□□□□ -0.8
SCARB2-209ENST00000638409 RALBP1Q15311 655 aa10.08□□□□□ -0.8
SCARB2-209ENST00000638409 SPTY2D1Q68D10 685 aaPredicted RBP10.08□□□□□ -0.8
SCARB2-209ENST00000638409 MCF2L2Q86YR7 1114 aa10.08□□□□□ -0.8
SCARB2-209ENST00000638409 INPP5FQ9Y2H2 1132 aa10.08□□□□□ -0.8
SCARB2-209ENST00000638409 DKK1O94907 266 aa10.07□□□□□ -0.8
SCARB2-209ENST00000638409 ATF3P18847 181 aa10.07□□□□□ -0.8
SCARB2-209ENST00000638409 HSD3B2P26439 372 aa10.07□□□□□ -0.8
SCARB2-209ENST00000638409 ARID5AQ03989 594 aa10.07□□□□□ -0.8
SCARB2-209ENST00000638409 SMC5Q8IY18 1101 aa10.07□□□□□ -0.8
SCARB2-209ENST00000638409 CCDC146Q8IYE0 955 aa10.07□□□□□ -0.8
SCARB2-209ENST00000638409 EMILIN1Q9Y6C2 1016 aa10.07□□□□□ -0.8
SCARB2-209ENST00000638409 FMN2Q9NZ56 1722 aa10.07□□□□□ -0.8
SCARB2-209ENST00000638409 QRICH2Q9H0J4 1663 aa10.07□□□□□ -0.8
SCARB2-209ENST00000638409 CREB3O43889 395 aa10.07□□□□□ -0.8
SCARB2-209ENST00000638409 MCCD1P59942 119 aaPredicted RBP10.07□□□□□ -0.8
SCARB2-209ENST00000638409 MST1RQ04912 1400 aa10.06□□□□□ -0.8
SCARB2-209ENST00000638409 CENPJQ9HC77 1338 aaPredicted RBP10.06□□□□□ -0.8
SCARB2-209ENST00000638409 UBAP1LF5GYI3 381 aa10.06□□□□□ -0.8
SCARB2-209ENST00000638409 PPFIA4O75335 1185 aa10.06□□□□□ -0.8
SCARB2-209ENST00000638409 PAX3P23760 479 aa10.06□□□□□ -0.8
SCARB2-209ENST00000638409 GNL2Q13823 731 aaKnown RBP10.06□□□□□ -0.8
SCARB2-209ENST00000638409 PLPP7Q8NBV4 271 aa10.06□□□□□ -0.8
SCARB2-209ENST00000638409 TMEM134Q9H6X4 195 aa10.06□□□□□ -0.8
SCARB2-209ENST00000638409 ZBBXA8MT70 800 aa10.06□□□□□ -0.8
SCARB2-209ENST00000638409 NAA30Q147X3 362 aaPredicted RBP10.06□□□□□ -0.8
SCARB2-209ENST00000638409 NUDT18Q6ZVK8 323 aa10.06□□□□□ -0.8
SCARB2-209ENST00000638409 FMNL3Q8IVF7 1028 aa10.05□□□□□ -0.8
SCARB2-209ENST00000638409 MAGEC2Q9UBF1 373 aaPredicted RBP10.05□□□□□ -0.8
SCARB2-209ENST00000638409 LAS1LQ9Y4W2 734 aaKnown RBP10.05□□□□□ -0.8
SCARB2-209ENST00000638409 TREHO43280 583 aa10.04□□□□□ -0.8
SCARB2-209ENST00000638409 C1orf167Q5SNV9 1468 aa10.04□□□□□ -0.8
SCARB2-209ENST00000638409 SFI1A8K8P3 1242 aa10.04□□□□□ -0.8
SCARB2-209ENST00000638409 FMR1Q06787 632 aaKnown RBP eCLIP10.04□□□□□ -0.8
SCARB2-209ENST00000638409 ZCRB1Q8TBF4 217 aaKnown RBP10.04□□□□□ -0.8
SCARB2-209ENST00000638409 METTL5Q9NRN9 209 aaKnown RBP10.04□□□□□ -0.8
SCARB2-209ENST00000638409 DNAAF2Q9NVR5 837 aaKnown RBP10.04□□□□□ -0.8
SCARB2-209ENST00000638409 DDX56Q9NY93 547 aaKnown RBP10.04□□□□□ -0.8
SCARB2-209ENST00000638409 ANKARQ7Z5J8 1434 aa10.04□□□□□ -0.8
SCARB2-209ENST00000638409 WASLO00401 505 aaPredicted RBP10.03□□□□□ -0.8
SCARB2-209ENST00000638409 GCGRP47871 477 aa10.03□□□□□ -0.8
SCARB2-209ENST00000638409 TMC4Q7Z404 712 aa10.03□□□□□ -0.8
SCARB2-209ENST00000638409 TERF2IPQ9NYB0 399 aa10.03□□□□□ -0.8
SCARB2-209ENST00000638409 ROBO1Q9Y6N7 1651 aa10.03□□□□□ -0.8
SCARB2-209ENST00000638409 RNF135Q8IUD6 432 aa10.03□□□□□ -0.8
SCARB2-209ENST00000638409 USP32Q8NFA0 1604 aa10.03□□□□□ -0.8
SCARB2-209ENST00000638409 TULP4Q9NRJ4 1543 aa10.03□□□□□ -0.8
SCARB2-209ENST00000638409 G3V3G9 751 aa10.03□□□□□ -0.8
SCARB2-209ENST00000638409 S100BP04271 92 aaPredicted RBP10.03□□□□□ -0.8
SCARB2-209ENST00000638409 TIE1P35590 1138 aa10.03□□□□□ -0.8
SCARB2-209ENST00000638409 TBX4P57082 545 aa10.03□□□□□ -0.8
SCARB2-209ENST00000638409 SAFB2Q14151 953 aaKnown RBP eCLIP10.03□□□□□ -0.8
SCARB2-209ENST00000638409 CEP126Q9P2H0 1117 aa10.03□□□□□ -0.8
SCARB2-209ENST00000638409 USP47Q96K76 1375 aa10.02□□□□□ -0.8
SCARB2-209ENST00000638409 DNAJB2P25686 324 aa10.02□□□□□ -0.81
SCARB2-209ENST00000638409 CBLBQ13191 982 aa10.02□□□□□ -0.81
SCARB2-209ENST00000638409 TSKSQ9UJT2 592 aa10.02□□□□□ -0.81
SCARB2-209ENST00000638409 PSMD2Q13200 908 aa10.02□□□□□ -0.81
SCARB2-209ENST00000638409 ADAM33Q9BZ11 813 aa10.02□□□□□ -0.81
SCARB2-209ENST00000638409 SMAPO00193 183 aa10.01□□□□□ -0.81
SCARB2-209ENST00000638409 DAB2P98082 770 aa10.01□□□□□ -0.81
SCARB2-209ENST00000638409 FKBP5Q13451 457 aaPredicted RBP10.01□□□□□ -0.81
SCARB2-209ENST00000638409 TMC1Q8TDI8 760 aa10.01□□□□□ -0.81
SCARB2-209ENST00000638409 JDP2Q8WYK2 163 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms