RNA–Protein interactions for RNA: ENST00000637903.1

SPTAN1-238, Transcript of spectrin alpha, non-erythrocytic 1, human

TSL 5

Gene SPTAN1, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPTAN1-238	ENST00000637903	NEFM	P07197	916 aa		10.9	□□□□□ -0.66
SPTAN1-238	ENST00000637903	GRIPAP1	Q4V328	841 aa		10.9	□□□□□ -0.66
SPTAN1-238	ENST00000637903	CCDC184	Q52MB2	194 aa		10.9	□□□□□ -0.66
SPTAN1-238	ENST00000637903	PNMA8A	Q86V59	439 aa	Predicted RBP	10.9	□□□□□ -0.66
SPTAN1-238	ENST00000637903	NUTM1	Q86Y26	1132 aa		10.9	□□□□□ -0.66
SPTAN1-238	ENST00000637903	ZNF34	Q8IZ26	560 aa		10.9	□□□□□ -0.66
SPTAN1-238	ENST00000637903	GPC2	Q8N158	579 aa		10.9	□□□□□ -0.66
SPTAN1-238	ENST00000637903	NGEF	Q8N5V2	710 aa		10.9	□□□□□ -0.66
SPTAN1-238	ENST00000637903	MRS2	Q9HD23	443 aa		10.9	□□□□□ -0.66
SPTAN1-238	ENST00000637903	RRP7A	Q9Y3A4	280 aa	Known RBP	10.9	□□□□□ -0.66
SPTAN1-238	ENST00000637903	ERBB4	Q15303	1308 aa		10.89	□□□□□ -0.67
SPTAN1-238	ENST00000637903	UBN2	Q6ZU65	1347 aa		10.89	□□□□□ -0.67
SPTAN1-238	ENST00000637903	EAPP	Q56P03	285 aa	Predicted RBP	10.89	□□□□□ -0.67
SPTAN1-238	ENST00000637903	SUSD4	Q5VX71	490 aa		10.89	□□□□□ -0.67
SPTAN1-238	ENST00000637903	KIF6	Q6ZMV9	814 aa		10.89	□□□□□ -0.67
SPTAN1-238	ENST00000637903	CRAMP1	Q96RY5	1269 aa		10.89	□□□□□ -0.67
SPTAN1-238	ENST00000637903	PNN	Q9H307	717 aa	Known RBP	10.89	□□□□□ -0.67
SPTAN1-238	ENST00000637903	FOXN1	O15353	648 aa		10.88	□□□□□ -0.67
SPTAN1-238	ENST00000637903	CAPN15	O75808	1086 aa		10.88	□□□□□ -0.67
SPTAN1-238	ENST00000637903	NTSR2	O95665	410 aa		10.88	□□□□□ -0.67
SPTAN1-238	ENST00000637903	MYL6B	P14649	208 aa		10.88	□□□□□ -0.67
SPTAN1-238	ENST00000637903	VEGFB	P49765	207 aa		10.88	□□□□□ -0.67
SPTAN1-238	ENST00000637903	GIGYF2	Q6Y7W6	1299 aa	Known RBP	10.88	□□□□□ -0.67
SPTAN1-238	ENST00000637903	LRP10	Q7Z4F1	713 aa		10.88	□□□□□ -0.67
SPTAN1-238	ENST00000637903	CNTROB	Q8N137	903 aa		10.88	□□□□□ -0.67
SPTAN1-238	ENST00000637903	JDP2	Q8WYK2	163 aa		10.88	□□□□□ -0.67
SPTAN1-238	ENST00000637903	THUMPD2	Q9BTF0	503 aa	Known RBP	10.88	□□□□□ -0.67
SPTAN1-238	ENST00000637903	PRDM10	Q9NQV6	1147 aa		10.88	□□□□□ -0.67
SPTAN1-238	ENST00000637903	CLEC11A	Q9Y240	323 aa		10.88	□□□□□ -0.67
SPTAN1-238	ENST00000637903	RNF123	Q5XPI4	1314 aa		10.87	□□□□□ -0.67
SPTAN1-238	ENST00000637903	RASSF10	A6NK89	507 aa		10.87	□□□□□ -0.67
SPTAN1-238	ENST00000637903	GPT	P24298	496 aa		10.87	□□□□□ -0.67
SPTAN1-238	ENST00000637903	EIF6	P56537	245 aa	Known RBP	10.87	□□□□□ -0.67
SPTAN1-238	ENST00000637903	PDIA6	Q15084	440 aa		10.87	□□□□□ -0.67
SPTAN1-238	ENST00000637903	SLC10A5	Q5PT55	438 aa		10.87	□□□□□ -0.67
SPTAN1-238	ENST00000637903	RPGR	Q92834	1020 aa	Known RBP	10.87	□□□□□ -0.67
SPTAN1-238	ENST00000637903	RBM17	Q96I25	401 aa	Known RBP	10.87	□□□□□ -0.67
SPTAN1-238	ENST00000637903	ZBTB3	Q9H5J0	574 aa		10.87	□□□□□ -0.67
SPTAN1-238	ENST00000637903	COL4A5	P29400	1685 aa		10.87	□□□□□ -0.67
SPTAN1-238	ENST00000637903	PARP10	Q53GL7	1025 aa		10.86	□□□□□ -0.67
SPTAN1-238	ENST00000637903	MAP1S	Q66K74	1059 aa	Predicted RBP	10.86	□□□□□ -0.67
SPTAN1-238	ENST00000637903	C3orf67	Q6ZVT6	689 aa		10.86	□□□□□ -0.67
SPTAN1-238	ENST00000637903	PPP1R42	Q7Z4L9	355 aa		10.86	□□□□□ -0.67
SPTAN1-238	ENST00000637903	VPS33B	Q9H267	617 aa		10.86	□□□□□ -0.67
SPTAN1-238	ENST00000637903	BABAM1	Q9NWV8	329 aa		10.86	□□□□□ -0.67
SPTAN1-238	ENST00000637903	WBP1L	Q9NX94	342 aa		10.86	□□□□□ -0.67
SPTAN1-238	ENST00000637903	LTBP1	Q14766	1721 aa		10.86	□□□□□ -0.67
SPTAN1-238	ENST00000637903	PPEF1	O14829	653 aa	Predicted RBP	10.85	□□□□□ -0.67
SPTAN1-238	ENST00000637903	CTCF	P49711	727 aa	Predicted RBP	10.85	□□□□□ -0.67
SPTAN1-238	ENST00000637903	SCNN1D	P51172	638 aa		10.85	□□□□□ -0.67
SPTAN1-238	ENST00000637903	WDR43	Q15061	677 aa	Known RBP eCLIP	10.85	□□□□□ -0.67
SPTAN1-238	ENST00000637903	DEFB115	Q30KQ5	88 aa		10.85	□□□□□ -0.67
SPTAN1-238	ENST00000637903	LARGE2	Q8N3Y3	721 aa		10.85	□□□□□ -0.67
SPTAN1-238	ENST00000637903	NLRP3	Q96P20	1036 aa		10.85	□□□□□ -0.67
SPTAN1-238	ENST00000637903	TSPYL4	Q9UJ04	414 aa		10.85	□□□□□ -0.67
SPTAN1-238	ENST00000637903	LMOD1	P29536	600 aa	Predicted RBP	10.84	□□□□□ -0.67
SPTAN1-238	ENST00000637903	EPS15	P42566	896 aa		10.84	□□□□□ -0.67
SPTAN1-238	ENST00000637903	USP50	Q70EL3	339 aa	Predicted RBP	10.84	□□□□□ -0.67
SPTAN1-238	ENST00000637903	SLC51A	Q86UW1	340 aa		10.84	□□□□□ -0.67
SPTAN1-238	ENST00000637903	AIDA	Q96BJ3	306 aa		10.84	□□□□□ -0.67
SPTAN1-238	ENST00000637903	UTP14A	Q9BVJ6	771 aa	Known RBP	10.84	□□□□□ -0.67
SPTAN1-238	ENST00000637903	RTFDC1	Q9BY42	306 aa	Predicted RBP	10.84	□□□□□ -0.67
SPTAN1-238	ENST00000637903	DDX21	Q9NR30	783 aa	Known RBP eCLIP	10.84	□□□□□ -0.67
SPTAN1-238	ENST00000637903	ATP6V0A2	Q9Y487	856 aa		10.84	□□□□□ -0.67
SPTAN1-238	ENST00000637903	GJA3	Q9Y6H8	435 aa		10.84	□□□□□ -0.67
SPTAN1-238	ENST00000637903	MAPK8IP3	Q9UPT6	1336 aa		10.84	□□□□□ -0.67
SPTAN1-238	ENST00000637903	RIPK4	P57078	832 aa		10.83	□□□□□ -0.68
SPTAN1-238	ENST00000637903	TRPM7	Q96QT4	1865 aa		10.83	□□□□□ -0.68
SPTAN1-238	ENST00000637903	WDR33	Q9C0J8	1336 aa	Known RBP	10.83	□□□□□ -0.68
SPTAN1-238	ENST00000637903	ANKRD36C	Q5JPF3	1778 aa		10.82	□□□□□ -0.68
SPTAN1-238	ENST00000637903	BBOX1	O75936	387 aa		10.82	□□□□□ -0.68
SPTAN1-238	ENST00000637903	EIF2S2	P20042	333 aa	Known RBP	10.82	□□□□□ -0.68
SPTAN1-238	ENST00000637903	TMPO	P42166	694 aa	Known RBP	10.82	□□□□□ -0.68
SPTAN1-238	ENST00000637903	MAP2K1	Q02750	393 aa	Predicted RBP	10.82	□□□□□ -0.68
SPTAN1-238	ENST00000637903	PROSER3	Q2NL68	480 aa		10.82	□□□□□ -0.68
SPTAN1-238	ENST00000637903	SP8	Q8IXZ3	490 aa		10.82	□□□□□ -0.68
SPTAN1-238	ENST00000637903	NIM1K	Q8IY84	436 aa		10.82	□□□□□ -0.68
SPTAN1-238	ENST00000637903	FAM9B	Q8IZU0	186 aa		10.82	□□□□□ -0.68
SPTAN1-238	ENST00000637903	ABCC4	O15439	1325 aa		10.82	□□□□□ -0.68
SPTAN1-238	ENST00000637903	LAMB2	P55268	1798 aa		10.81	□□□□□ -0.68
SPTAN1-238	ENST00000637903	TCERG1	O14776	1098 aa	Known RBP	10.81	□□□□□ -0.68
SPTAN1-238	ENST00000637903	PPIP5K2	O43314	1243 aa		10.81	□□□□□ -0.68
SPTAN1-238	ENST00000637903	ANXA1	P04083	346 aa		10.81	□□□□□ -0.68
SPTAN1-238	ENST00000637903	LBX1	P52954	281 aa		10.81	□□□□□ -0.68
SPTAN1-238	ENST00000637903	AOC3	Q16853	763 aa		10.81	□□□□□ -0.68
SPTAN1-238	ENST00000637903	HSP90AB3P	Q58FF7	597 aa		10.81	□□□□□ -0.68
SPTAN1-238	ENST00000637903	CST9	Q5W186	159 aa		10.81	□□□□□ -0.68
SPTAN1-238	ENST00000637903	COPS6	Q7L5N1	327 aa		10.81	□□□□□ -0.68
SPTAN1-238	ENST00000637903	NLRP10	Q86W26	655 aa		10.81	□□□□□ -0.68
SPTAN1-238	ENST00000637903	SUPT20H	Q8NEM7	779 aa		10.81	□□□□□ -0.68
SPTAN1-238	ENST00000637903	TMX4	Q9H1E5	349 aa	Predicted RBP	10.81	□□□□□ -0.68
SPTAN1-238	ENST00000637903	ADARB2	Q9NS39	739 aa	Known RBP	10.81	□□□□□ -0.68
SPTAN1-238	ENST00000637903	GPRC5D	Q9NZD1	345 aa		10.81	□□□□□ -0.68
SPTAN1-238	ENST00000637903	ZNRF3	Q9ULT6	936 aa		10.81	□□□□□ -0.68
SPTAN1-238	ENST00000637903	ABT1	Q9ULW3	272 aa	Known RBP	10.81	□□□□□ -0.68
SPTAN1-238	ENST00000637903	ADAMTS8	Q9UP79	889 aa		10.81	□□□□□ -0.68
SPTAN1-238	ENST00000637903	CHL1	O00533	1208 aa		10.8	□□□□□ -0.68
SPTAN1-238	ENST00000637903	HSPA8	P11142	646 aa	Known RBP	10.8	□□□□□ -0.68
SPTAN1-238	ENST00000637903	FMR1	Q06787	632 aa	Known RBP eCLIP	10.8	□□□□□ -0.68
SPTAN1-238	ENST00000637903	CXCL9	Q07325	125 aa		10.8	□□□□□ -0.68

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