RNA–Protein interactions for RNA: ENST00000634338.1

SMARCA2-220, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-220ENST00000634338 XKR5Q6UX68 686 aa10.01□□□□□ -0.81
SMARCA2-220ENST00000634338 DNAJC2Q99543 621 aaKnown RBP10.01□□□□□ -0.81
SMARCA2-220ENST00000634338 ABCC9O60706 1549 aa10.01□□□□□ -0.81
SMARCA2-220ENST00000634338 TNFRSF21O75509 655 aa10□□□□□ -0.81
SMARCA2-220ENST00000634338 CDK11BP21127 795 aaKnown RBP10□□□□□ -0.81
SMARCA2-220ENST00000634338 WDR4P57081 412 aaKnown RBP10□□□□□ -0.81
SMARCA2-220ENST00000634338 C4orf17Q53FE4 359 aa10□□□□□ -0.81
SMARCA2-220ENST00000634338 ZNF394Q53GI3 561 aa10□□□□□ -0.81
SMARCA2-220ENST00000634338 HS2ST1Q7LGA3 356 aa10□□□□□ -0.81
SMARCA2-220ENST00000634338 USP48Q86UV5 1035 aa10□□□□□ -0.81
SMARCA2-220ENST00000634338 SNX29Q8TEQ0 813 aa10□□□□□ -0.81
SMARCA2-220ENST00000634338 DHX38Q92620 1227 aaKnown RBP10□□□□□ -0.81
SMARCA2-220ENST00000634338 ZNF395Q9H8N7 513 aaPredicted RBP10□□□□□ -0.81
SMARCA2-220ENST00000634338 ZFAND3Q9H8U3 227 aa10□□□□□ -0.81
SMARCA2-220ENST00000634338 DMGDHQ9UI17 866 aaKnown RBP10□□□□□ -0.81
SMARCA2-220ENST00000634338 CDK11AQ9UQ88 783 aaPredicted RBP10□□□□□ -0.81
SMARCA2-220ENST00000634338 INPP5FQ9Y2H2 1132 aa10□□□□□ -0.81
SMARCA2-220ENST00000634338 USP31Q70CQ4 1352 aa10□□□□□ -0.81
SMARCA2-220ENST00000634338 RACK1P63244 317 aaKnown RBP9.99□□□□□ -0.81
SMARCA2-220ENST00000634338 SLC27A3Q5K4L6 730 aa9.99□□□□□ -0.81
SMARCA2-220ENST00000634338 SPRYD7Q5W111 196 aa9.99□□□□□ -0.81
SMARCA2-220ENST00000634338 NBPF10Q6P3W6 841 aaKnown RBP9.99□□□□□ -0.81
SMARCA2-220ENST00000634338 CCDC74AQ96AQ1 378 aa9.99□□□□□ -0.81
SMARCA2-220ENST00000634338 SUSD3Q96L08 255 aa9.99□□□□□ -0.81
SMARCA2-220ENST00000634338 FNDC3AQ9Y2H6 1198 aaKnown RBP9.99□□□□□ -0.81
SMARCA2-220ENST00000634338 TIMP2P16035 220 aa9.98□□□□□ -0.81
SMARCA2-220ENST00000634338 DNAJA1P31689 397 aaKnown RBP9.98□□□□□ -0.81
SMARCA2-220ENST00000634338 GTF2F1P35269 517 aaKnown RBP eCLIP9.98□□□□□ -0.81
SMARCA2-220ENST00000634338 IDH3AP50213 366 aa9.98□□□□□ -0.81
SMARCA2-220ENST00000634338 ARID5AQ03989 594 aa9.98□□□□□ -0.81
SMARCA2-220ENST00000634338 PDE12Q6L8Q7 609 aaKnown RBP9.98□□□□□ -0.81
SMARCA2-220ENST00000634338 SNIP1Q8TAD8 396 aaKnown RBP9.98□□□□□ -0.81
SMARCA2-220ENST00000634338 OSBPL7Q9BZF2 842 aa9.98□□□□□ -0.81
SMARCA2-220ENST00000634338 LNPKQ9C0E8 428 aa9.98□□□□□ -0.81
SMARCA2-220ENST00000634338 FOXD3Q9UJU5 478 aaPredicted RBP9.98□□□□□ -0.81
SMARCA2-220ENST00000634338 PCDHGB7Q9Y5F8 929 aa9.98□□□□□ -0.81
SMARCA2-220ENST00000634338 TATP17735 454 aaPredicted RBP9.97□□□□□ -0.81
SMARCA2-220ENST00000634338 ST13P50502 369 aaKnown RBP9.97□□□□□ -0.81
SMARCA2-220ENST00000634338 RNF144AP50876 292 aaPredicted RBP9.97□□□□□ -0.81
SMARCA2-220ENST00000634338 ARSDP51689 593 aa9.97□□□□□ -0.81
SMARCA2-220ENST00000634338 USPL1Q5W0Q7 1092 aa9.97□□□□□ -0.81
SMARCA2-220ENST00000634338 GIMAP6Q6P9H5 292 aa9.97□□□□□ -0.81
SMARCA2-220ENST00000634338 NOP9Q86U38 636 aaKnown RBP9.97□□□□□ -0.81
SMARCA2-220ENST00000634338 MEIOBQ8N635 442 aa9.97□□□□□ -0.81
SMARCA2-220ENST00000634338 SRA1Q9HD15 236 aaKnown RBP9.97□□□□□ -0.81
SMARCA2-220ENST00000634338 FAM8A1Q9UBU6 413 aa9.97□□□□□ -0.81
SMARCA2-220ENST00000634338 SPATA31C2B4DYI2 1134 aa9.96□□□□□ -0.82
SMARCA2-220ENST00000634338 ZNF697Q5TEC3 545 aa9.96□□□□□ -0.82
SMARCA2-220ENST00000634338 PI16Q6UXB8 463 aa9.96□□□□□ -0.82
SMARCA2-220ENST00000634338 ZNF438Q7Z4V0 828 aa9.96□□□□□ -0.82
SMARCA2-220ENST00000634338 EPS8L3Q8TE67 593 aaKnown RBP9.96□□□□□ -0.82
SMARCA2-220ENST00000634338 SRCIN1Q9C0H9 1055 aa9.96□□□□□ -0.82
SMARCA2-220ENST00000634338 ZFYVE28Q9HCC9 887 aa9.96□□□□□ -0.82
SMARCA2-220ENST00000634338 ANKIB1Q9P2G1 1089 aa9.96□□□□□ -0.82
SMARCA2-220ENST00000634338 GGT7Q9UJ14 662 aa9.96□□□□□ -0.82
SMARCA2-220ENST00000634338 INPP5BP32019 993 aa9.95□□□□□ -0.82
SMARCA2-220ENST00000634338 IRS1P35568 1242 aa9.95□□□□□ -0.82
SMARCA2-220ENST00000634338 TAF1CQ15572 869 aaPredicted RBP9.95□□□□□ -0.82
SMARCA2-220ENST00000634338 ZNF598Q86UK7 904 aaKnown RBP9.95□□□□□ -0.82
SMARCA2-220ENST00000634338 ZNF280CQ8ND82 737 aa9.95□□□□□ -0.82
SMARCA2-220ENST00000634338 AIDAQ96BJ3 306 aa9.95□□□□□ -0.82
SMARCA2-220ENST00000634338 HSH2DQ96JZ2 352 aa9.95□□□□□ -0.82
SMARCA2-220ENST00000634338 PKD2L1Q9P0L9 805 aa9.95□□□□□ -0.82
SMARCA2-220ENST00000634338 TRIP4Q15650 581 aaPredicted RBP9.94□□□□□ -0.82
SMARCA2-220ENST00000634338 KLRG1Q96E93 195 aa9.94□□□□□ -0.82
SMARCA2-220ENST00000634338 UBAP1LF5GYI3 381 aa9.93□□□□□ -0.82
SMARCA2-220ENST00000634338 PHACTR2O75167 634 aa9.93□□□□□ -0.82
SMARCA2-220ENST00000634338 USP17L7P0C7H9 530 aa9.93□□□□□ -0.82
SMARCA2-220ENST00000634338 GJA8P48165 433 aa9.93□□□□□ -0.82
SMARCA2-220ENST00000634338 RBL2Q08999 1139 aa9.93□□□□□ -0.82
SMARCA2-220ENST00000634338 MEI1Q5TIA1 1274 aa9.93□□□□□ -0.82
SMARCA2-220ENST00000634338 VPS37DQ86XT2 251 aa9.93□□□□□ -0.82
SMARCA2-220ENST00000634338 RTCBQ9Y3I0 505 aaKnown RBP9.93□□□□□ -0.82
SMARCA2-220ENST00000634338 KCNMB2Q9Y691 235 aa9.93□□□□□ -0.82
SMARCA2-220ENST00000634338 FOXC1Q12948 553 aa9.92□□□□□ -0.82
SMARCA2-220ENST00000634338 BICDL1Q6ZP65 573 aa9.92□□□□□ -0.82
SMARCA2-220ENST00000634338 BTLAQ7Z6A9 289 aa9.92□□□□□ -0.82
SMARCA2-220ENST00000634338 TSEN34Q9BSV6 310 aaKnown RBP9.92□□□□□ -0.82
SMARCA2-220ENST00000634338 ELP3Q9H9T3 547 aa9.92□□□□□ -0.82
SMARCA2-220ENST00000634338 NPHS2Q9NP85 383 aa9.92□□□□□ -0.82
SMARCA2-220ENST00000634338 J3QL48 77 aa9.91□□□□□ -0.82
SMARCA2-220ENST00000634338 SPINT1O43278 529 aa9.91□□□□□ -0.82
SMARCA2-220ENST00000634338 ATP4AP20648 1035 aa9.91□□□□□ -0.82
SMARCA2-220ENST00000634338 SOGA3Q5TF21 947 aa9.91□□□□□ -0.82
SMARCA2-220ENST00000634338 ERMP1Q7Z2K6 904 aa9.91□□□□□ -0.82
SMARCA2-220ENST00000634338 CMTR1Q8N1G2 835 aaKnown RBP9.91□□□□□ -0.82
SMARCA2-220ENST00000634338 INSM2Q96T92 566 aaPredicted RBP9.91□□□□□ -0.82
SMARCA2-220ENST00000634338 HIRIP3Q9BW71 556 aaPredicted RBP9.91□□□□□ -0.82
SMARCA2-220ENST00000634338 USP20Q9Y2K6 914 aa9.91□□□□□ -0.82
SMARCA2-220ENST00000634338 POTECB2RU33 542 aa9.9□□□□□ -0.82
SMARCA2-220ENST00000634338 FGRP09769 529 aa9.9□□□□□ -0.82
SMARCA2-220ENST00000634338 PHKA2P46019 1235 aa9.9□□□□□ -0.82
SMARCA2-220ENST00000634338 CCDC144BQ3MJ40 725 aa9.9□□□□□ -0.82
SMARCA2-220ENST00000634338 MCF2L2Q86YR7 1114 aa9.9□□□□□ -0.82
SMARCA2-220ENST00000634338 GALNT12Q8IXK2 581 aa9.9□□□□□ -0.82
SMARCA2-220ENST00000634338 TMEM63CQ9P1W3 806 aa9.9□□□□□ -0.82
SMARCA2-220ENST00000634338 TMA7Q9Y2S6 64 aaKnown RBP9.9□□□□□ -0.82
SMARCA2-220ENST00000634338 EPB42P16452 691 aa9.89□□□□□ -0.83
SMARCA2-220ENST00000634338 NCLP19338 710 aaKnown RBP9.89□□□□□ -0.83
SMARCA2-220ENST00000634338 WDR44Q5JSH3 913 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms