RNA–Protein interactions for RNA: ENST00000634338.1

SMARCA2-220, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-220ENST00000634338 CHIC1Q5VXU3 224 aa24.59■■□□□ 1.53
SMARCA2-220ENST00000634338 AEBP2Q6ZN18 517 aaPredicted RBP24.21■■□□□ 1.47
SMARCA2-220ENST00000634338 PHF23Q9BUL5 403 aaPredicted RBP21.71■■□□□ 1.07
SMARCA2-220ENST00000634338 SENP3Q9H4L4 574 aaPredicted RBP20.42■□□□□ 0.86
SMARCA2-220ENST00000634338 PLPPR3Q6T4P5 718 aa20.39■□□□□ 0.85
SMARCA2-220ENST00000634338 ADRA2BP18089 450 aa19.02■□□□□ 0.64
SMARCA2-220ENST00000634338 PPP6R1Q9UPN7 881 aa18.82■□□□□ 0.6
SMARCA2-220ENST00000634338 FOXD1Q16676 465 aa18.81■□□□□ 0.6
SMARCA2-220ENST00000634338 KCNA4P22459 653 aa18.72■□□□□ 0.59
SMARCA2-220ENST00000634338 EHMT2Q96KQ7 1210 aa18.54■□□□□ 0.56
SMARCA2-220ENST00000634338 POTEDQ86YR6 584 aa18.48■□□□□ 0.55
SMARCA2-220ENST00000634338 PPP4R3CPQ6ZMV5 832 aa18.07■□□□□ 0.48
SMARCA2-220ENST00000634338 SLC4A1APQ9BWU0 796 aaKnown RBP18■□□□□ 0.47
SMARCA2-220ENST00000634338 PIAS4Q8N2W9 510 aaPredicted RBP17.97■□□□□ 0.47
SMARCA2-220ENST00000634338 CSRNP3Q8WYN3 585 aa17.92■□□□□ 0.46
SMARCA2-220ENST00000634338 NCBP3Q53F19 620 aaKnown RBP17.89■□□□□ 0.45
SMARCA2-220ENST00000634338 MSH5O43196 834 aa17.78■□□□□ 0.44
SMARCA2-220ENST00000634338 NPM3O75607 178 aaKnown RBP17.62■□□□□ 0.41
SMARCA2-220ENST00000634338 CNKSR2Q8WXI2 1034 aa17.37■□□□□ 0.37
SMARCA2-220ENST00000634338 SCAF1Q9H7N4 1312 aaKnown RBP17.27■□□□□ 0.36
SMARCA2-220ENST00000634338 ZBTB22O15209 634 aa17.25■□□□□ 0.35
SMARCA2-220ENST00000634338 DNAJC5BQ9UF47 199 aa17.05■□□□□ 0.32
SMARCA2-220ENST00000634338 FOXD4L1Q9NU39 408 aa16.98■□□□□ 0.31
SMARCA2-220ENST00000634338 MAPK8IP2Q13387 824 aaPredicted RBP16.81■□□□□ 0.28
SMARCA2-220ENST00000634338 RNF216Q9NWF9 866 aaPredicted RBP16.81■□□□□ 0.28
SMARCA2-220ENST00000634338 HOXD11P31277 338 aaPredicted RBP16.49■□□□□ 0.23
SMARCA2-220ENST00000634338 DMRT2Q9Y5R5 561 aa16.45■□□□□ 0.22
SMARCA2-220ENST00000634338 SLC4A2P04920 1241 aa16.41■□□□□ 0.22
SMARCA2-220ENST00000634338 AMER1Q5JTC6 1135 aaPredicted RBP16.41■□□□□ 0.22
SMARCA2-220ENST00000634338 RTN4Q9NQC3 1192 aaKnown RBP16.36■□□□□ 0.21
SMARCA2-220ENST00000634338 SLC24A1O60721 1099 aa16.34■□□□□ 0.21
SMARCA2-220ENST00000634338 ATXN8OSP0DMR3 200 aa16.33■□□□□ 0.2
SMARCA2-220ENST00000634338 MYCNP04198 464 aaPredicted RBP16.28■□□□□ 0.2
SMARCA2-220ENST00000634338 FKBP8Q14318 412 aa16.13■□□□□ 0.17
SMARCA2-220ENST00000634338 ATF5Q9Y2D1 282 aaPredicted RBP15.73■□□□□ 0.11
SMARCA2-220ENST00000634338 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.7■□□□□ 0.1
SMARCA2-220ENST00000634338 HNRNPUL2Q1KMD3 747 aaKnown RBP15.7■□□□□ 0.1
SMARCA2-220ENST00000634338 SAMD1Q6SPF0 538 aaPredicted RBP15.68■□□□□ 0.1
SMARCA2-220ENST00000634338 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.67■□□□□ 0.1
SMARCA2-220ENST00000634338 CACNB1Q02641 598 aaPredicted RBP15.65■□□□□ 0.1
SMARCA2-220ENST00000634338 DCAF8L1A6NGE4 600 aa15.62■□□□□ 0.09
SMARCA2-220ENST00000634338 U3KPZ7 1027 aaPredicted RBP15.56■□□□□ 0.08
SMARCA2-220ENST00000634338 ZNF219Q9P2Y4 722 aaPredicted RBP15.38■□□□□ 0.05
SMARCA2-220ENST00000634338 FBXO3Q9UK99 471 aa15.34■□□□□ 0.05
SMARCA2-220ENST00000634338 APLP2Q06481 763 aa15.32■□□□□ 0.04
SMARCA2-220ENST00000634338 SPDYE4A6NLX3 237 aa15.23■□□□□ 0.03
SMARCA2-220ENST00000634338 PROM2Q8N271 834 aa15.17■□□□□ 0.02
SMARCA2-220ENST00000634338 MKRN4PQ13434 485 aaPredicted RBP15.12■□□□□ 0.01
SMARCA2-220ENST00000634338 PLCB2Q00722 1185 aa15.1■□□□□ 0.01
SMARCA2-220ENST00000634338 VASPP50552 380 aaPredicted RBP15.09■□□□□ 0.01
SMARCA2-220ENST00000634338 RNF39Q9H2S5 420 aa15.08■□□□□ 0
SMARCA2-220ENST00000634338 FBLN2P98095 1184 aa15.03■□□□□ -0
SMARCA2-220ENST00000634338 IFNLR1Q8IU57 520 aaPredicted RBP14.94□□□□□ -0.02
SMARCA2-220ENST00000634338 C1QBPQ07021 282 aaKnown RBP14.86□□□□□ -0.03
SMARCA2-220ENST00000634338 TRHP20396 242 aaPredicted RBP14.85□□□□□ -0.03
SMARCA2-220ENST00000634338 HAP1P54257 671 aaPredicted RBP14.84□□□□□ -0.03
SMARCA2-220ENST00000634338 POLA2Q14181 598 aa14.84□□□□□ -0.03
SMARCA2-220ENST00000634338 DCAF8L2P0C7V8 631 aa14.83□□□□□ -0.04
SMARCA2-220ENST00000634338 PKD2Q13563 968 aa14.82□□□□□ -0.04
SMARCA2-220ENST00000634338 SPINK5Q9NQ38 1064 aaPredicted RBP14.81□□□□□ -0.04
SMARCA2-220ENST00000634338 ZBTB12Q9Y330 459 aaPredicted RBP14.72□□□□□ -0.05
SMARCA2-220ENST00000634338 CAPN15O75808 1086 aa14.7□□□□□ -0.06
SMARCA2-220ENST00000634338 BCANQ96GW7 911 aa14.69□□□□□ -0.06
SMARCA2-220ENST00000634338 VSIG10Q8N0Z9 540 aa14.68□□□□□ -0.06
SMARCA2-220ENST00000634338 SPOCK2Q92563 424 aa14.62□□□□□ -0.07
SMARCA2-220ENST00000634338 KLHL34Q8N239 644 aa14.57□□□□□ -0.08
SMARCA2-220ENST00000634338 BBXQ8WY36 941 aaPredicted RBP14.57□□□□□ -0.08
SMARCA2-220ENST00000634338 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.57□□□□□ -0.08
SMARCA2-220ENST00000634338 ECM2O94769 699 aaPredicted RBP14.54□□□□□ -0.08
SMARCA2-220ENST00000634338 STAG3Q9UJ98 1225 aa14.53□□□□□ -0.08
SMARCA2-220ENST00000634338 ABCB7O75027 752 aa14.5□□□□□ -0.09
SMARCA2-220ENST00000634338 TAOK2Q9UL54 1235 aa14.48□□□□□ -0.09
SMARCA2-220ENST00000634338 NPM1P06748 294 aaKnown RBP eCLIP14.45□□□□□ -0.1
SMARCA2-220ENST00000634338 ZNF692Q9BU19 519 aaPredicted RBP14.45□□□□□ -0.1
SMARCA2-220ENST00000634338 PRKCSHP14314 528 aaPredicted RBP14.43□□□□□ -0.1
SMARCA2-220ENST00000634338 PAXIP1Q6ZW49 1069 aaPredicted RBP14.43□□□□□ -0.1
SMARCA2-220ENST00000634338 KDM2AQ9Y2K7 1162 aa14.42□□□□□ -0.1
SMARCA2-220ENST00000634338 PLCD3Q8N3E9 789 aa14.41□□□□□ -0.1
SMARCA2-220ENST00000634338 SPDYE2BA6NHP3 402 aa14.39□□□□□ -0.11
SMARCA2-220ENST00000634338 SPDYE6P0CI01 402 aa14.39□□□□□ -0.11
SMARCA2-220ENST00000634338 SPDYE2Q495Y8 402 aa14.39□□□□□ -0.11
SMARCA2-220ENST00000634338 SSUH2Q9Y2M2 353 aa14.39□□□□□ -0.11
SMARCA2-220ENST00000634338 CFAP44Q96MT7 982 aa14.38□□□□□ -0.11
SMARCA2-220ENST00000634338 RGL2O15211 777 aa14.37□□□□□ -0.11
SMARCA2-220ENST00000634338 POTEHQ6S545 545 aa14.36□□□□□ -0.11
SMARCA2-220ENST00000634338 OSCARQ8IYS5 282 aa14.31□□□□□ -0.12
SMARCA2-220ENST00000634338 SPRYD3Q8NCJ5 442 aa14.31□□□□□ -0.12
SMARCA2-220ENST00000634338 MIER1Q8N108 512 aa14.3□□□□□ -0.12
SMARCA2-220ENST00000634338 PABPN1Q86U42 306 aaKnown RBP eCLIP14.29□□□□□ -0.12
SMARCA2-220ENST00000634338 DSG3P32926 999 aa14.26□□□□□ -0.13
SMARCA2-220ENST00000634338 TPRNQ4KMQ1 711 aa14.24□□□□□ -0.13
SMARCA2-220ENST00000634338 ZBTB47Q9UFB7 747 aaPredicted RBP14.23□□□□□ -0.13
SMARCA2-220ENST00000634338 TSHZ2Q9NRE2 1034 aa14.21□□□□□ -0.13
SMARCA2-220ENST00000634338 PLEKHG5O94827 1062 aa14.19□□□□□ -0.14
SMARCA2-220ENST00000634338 CIZ1Q9ULV3 898 aaPredicted RBP14.19□□□□□ -0.14
SMARCA2-220ENST00000634338 CHGAP10645 457 aaKnown RBP14.18□□□□□ -0.14
SMARCA2-220ENST00000634338 TRIM41Q8WV44 630 aa14.18□□□□□ -0.14
SMARCA2-220ENST00000634338 DNAJC5Q9H3Z4 198 aa14.1□□□□□ -0.15
SMARCA2-220ENST00000634338 HS6ST3Q8IZP7 471 aa14.09□□□□□ -0.15
SMARCA2-220ENST00000634338 NBR1Q14596 966 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms