RNA–Protein interactions for RNA: ENST00000633402.1

LINC01002-228, Transcript of long intergenic non-protein coding RNA 1002, humanhuman

TSL 5 BASIC

Gene LINC01002, Length 565 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01002-228ENST00000633402 SYNE4Q8N205 404 aa11.71□□□□□ -0.53
LINC01002-228ENST00000633402 CRAMP1Q96RY5 1269 aa11.71□□□□□ -0.53
LINC01002-228ENST00000633402 THSD7BQ9C0I4 1608 aa11.71□□□□□ -0.54
LINC01002-228ENST00000633402 LRRC37AA6NMS7 1700 aa11.7□□□□□ -0.54
LINC01002-228ENST00000633402 FAM177BA6PVY3 158 aa11.7□□□□□ -0.54
LINC01002-228ENST00000633402 SLC10A5Q5PT55 438 aa11.7□□□□□ -0.54
LINC01002-228ENST00000633402 C3orf67Q6ZVT6 689 aa11.7□□□□□ -0.54
LINC01002-228ENST00000633402 SLC51AQ86UW1 340 aa11.7□□□□□ -0.54
LINC01002-228ENST00000633402 GPC2Q8N158 579 aa11.7□□□□□ -0.54
LINC01002-228ENST00000633402 RRP7AQ9Y3A4 280 aaKnown RBP11.7□□□□□ -0.54
LINC01002-228ENST00000633402 PROSER3Q2NL68 480 aa11.69□□□□□ -0.54
LINC01002-228ENST00000633402 GRIPAP1Q4V328 841 aa11.69□□□□□ -0.54
LINC01002-228ENST00000633402 KIF6Q6ZMV9 814 aa11.69□□□□□ -0.54
LINC01002-228ENST00000633402 PNNQ9H307 717 aaKnown RBP11.69□□□□□ -0.54
LINC01002-228ENST00000633402 ZBTB3Q9H5J0 574 aa11.69□□□□□ -0.54
LINC01002-228ENST00000633402 HACL1Q9UJ83 578 aa11.69□□□□□ -0.54
LINC01002-228ENST00000633402 DDX60Q8IY21 1712 aaKnown RBP11.69□□□□□ -0.54
LINC01002-228ENST00000633402 RNF123Q5XPI4 1314 aa11.68□□□□□ -0.54
LINC01002-228ENST00000633402 NEFMP07197 916 aa11.68□□□□□ -0.54
LINC01002-228ENST00000633402 MYL6BP14649 208 aa11.68□□□□□ -0.54
LINC01002-228ENST00000633402 GPTP24298 496 aa11.68□□□□□ -0.54
LINC01002-228ENST00000633402 EPHX2P34913 555 aa11.68□□□□□ -0.54
LINC01002-228ENST00000633402 TMPOP42166 694 aaKnown RBP11.68□□□□□ -0.54
LINC01002-228ENST00000633402 RALBP1Q15311 655 aa11.68□□□□□ -0.54
LINC01002-228ENST00000633402 PARP10Q53GL7 1025 aa11.68□□□□□ -0.54
LINC01002-228ENST00000633402 NGEFQ8N5V2 710 aa11.68□□□□□ -0.54
LINC01002-228ENST00000633402 DUOX1Q9NRD9 1551 aa11.67□□□□□ -0.54
LINC01002-228ENST00000633402 MAPK8IP3Q9UPT6 1336 aa11.67□□□□□ -0.54
LINC01002-228ENST00000633402 SCNN1DP51172 638 aa11.67□□□□□ -0.54
LINC01002-228ENST00000633402 PNMA8AQ86V59 439 aaPredicted RBP11.67□□□□□ -0.54
LINC01002-228ENST00000633402 RTFDC1Q9BY42 306 aaPredicted RBP11.67□□□□□ -0.54
LINC01002-228ENST00000633402 TSPYL4Q9UJ04 414 aa11.67□□□□□ -0.54
LINC01002-228ENST00000633402 TAF1P21675 1872 aa11.66□□□□□ -0.54
LINC01002-228ENST00000633402 TRPM7Q96QT4 1865 aa11.66□□□□□ -0.54
LINC01002-228ENST00000633402 RASSF10A6NK89 507 aa11.66□□□□□ -0.54
LINC01002-228ENST00000633402 CHL1O00533 1208 aa11.66□□□□□ -0.54
LINC01002-228ENST00000633402 GTF2E1P29083 439 aaPredicted RBP11.66□□□□□ -0.54
LINC01002-228ENST00000633402 RIPK4P57078 832 aa11.66□□□□□ -0.54
LINC01002-228ENST00000633402 RPGRQ92834 1020 aaKnown RBP11.66□□□□□ -0.54
LINC01002-228ENST00000633402 MKRN1Q9UHC7 482 aaKnown RBP11.66□□□□□ -0.54
LINC01002-228ENST00000633402 COL4A1P02462 1669 aa11.65□□□□□ -0.54
LINC01002-228ENST00000633402 TMEM88BA6NKF7 163 aa11.65□□□□□ -0.54
LINC01002-228ENST00000633402 PPP1R42Q7Z4L9 355 aa11.65□□□□□ -0.54
LINC01002-228ENST00000633402 NLRP10Q86W26 655 aa11.65□□□□□ -0.54
LINC01002-228ENST00000633402 TNS4Q8IZW8 715 aa11.65□□□□□ -0.54
LINC01002-228ENST00000633402 JDP2Q8WYK2 163 aa11.65□□□□□ -0.54
LINC01002-228ENST00000633402 RBM17Q96I25 401 aaKnown RBP11.65□□□□□ -0.54
LINC01002-228ENST00000633402 VPS33BQ9H267 617 aa11.65□□□□□ -0.54
LINC01002-228ENST00000633402 TRIM35Q9UPQ4 493 aa11.65□□□□□ -0.54
LINC01002-228ENST00000633402 ATP6V0A2Q9Y487 856 aa11.65□□□□□ -0.54
LINC01002-228ENST00000633402 ABCC4O15439 1325 aa11.64□□□□□ -0.55
LINC01002-228ENST00000633402 PPEF1O14829 653 aaPredicted RBP11.64□□□□□ -0.55
LINC01002-228ENST00000633402 ANXA1P04083 346 aa11.64□□□□□ -0.55
LINC01002-228ENST00000633402 VEGFBP49765 207 aa11.64□□□□□ -0.55
LINC01002-228ENST00000633402 CNTROBQ8N137 903 aa11.64□□□□□ -0.55
LINC01002-228ENST00000633402 DDX21Q9NR30 783 aaKnown RBP eCLIP11.64□□□□□ -0.55
LINC01002-228ENST00000633402 FOXN1O15353 648 aa11.63□□□□□ -0.55
LINC01002-228ENST00000633402 LMOD3Q0VAK6 560 aa11.63□□□□□ -0.55
LINC01002-228ENST00000633402 KRT24Q2M2I5 525 aa11.63□□□□□ -0.55
LINC01002-228ENST00000633402 EAPPQ56P03 285 aaPredicted RBP11.63□□□□□ -0.55
LINC01002-228ENST00000633402 MAP1SQ66K74 1059 aaPredicted RBP11.63□□□□□ -0.55
LINC01002-228ENST00000633402 COPS6Q7L5N1 327 aa11.63□□□□□ -0.55
LINC01002-228ENST00000633402 NLRP3Q96P20 1036 aa11.63□□□□□ -0.55
LINC01002-228ENST00000633402 UTP14AQ9BVJ6 771 aaKnown RBP11.63□□□□□ -0.55
LINC01002-228ENST00000633402 WBP1LQ9NX94 342 aa11.63□□□□□ -0.55
LINC01002-228ENST00000633402 MYBBP1AQ9BQG0 1328 aaKnown RBP11.62□□□□□ -0.55
LINC01002-228ENST00000633402 HOXB7P09629 217 aa11.62□□□□□ -0.55
LINC01002-228ENST00000633402 EIF2S2P20042 333 aaKnown RBP11.62□□□□□ -0.55
LINC01002-228ENST00000633402 EPS15P42566 896 aa11.62□□□□□ -0.55
LINC01002-228ENST00000633402 EIF6P56537 245 aaKnown RBP11.62□□□□□ -0.55
LINC01002-228ENST00000633402 TCIRG1Q13488 830 aa11.62□□□□□ -0.55
LINC01002-228ENST00000633402 HSP90AB3PQ58FF7 597 aa11.62□□□□□ -0.55
LINC01002-228ENST00000633402 SP8Q8IXZ3 490 aa11.62□□□□□ -0.55
LINC01002-228ENST00000633402 LARGE2Q8N3Y3 721 aa11.62□□□□□ -0.55
LINC01002-228ENST00000633402 XAGE3Q8WTP9 111 aa11.62□□□□□ -0.55
LINC01002-228ENST00000633402 PRDM10Q9NQV6 1147 aa11.62□□□□□ -0.55
LINC01002-228ENST00000633402 BBOX1O75936 387 aa11.61□□□□□ -0.55
LINC01002-228ENST00000633402 CXCL9Q07325 125 aa11.61□□□□□ -0.55
LINC01002-228ENST00000633402 USP50Q70EL3 339 aaPredicted RBP11.61□□□□□ -0.55
LINC01002-228ENST00000633402 ISCA1Q9BUE6 129 aa11.61□□□□□ -0.55
LINC01002-228ENST00000633402 GPRC5DQ9NZD1 345 aa11.61□□□□□ -0.55
LINC01002-228ENST00000633402 PGAP2Q9UHJ9 254 aa11.61□□□□□ -0.55
LINC01002-228ENST00000633402 CDHR2Q9BYE9 1310 aa11.6□□□□□ -0.55
LINC01002-228ENST00000633402 ZNF853P0CG23 659 aa11.6□□□□□ -0.55
LINC01002-228ENST00000633402 HCLS1P14317 486 aaPredicted RBP11.6□□□□□ -0.55
LINC01002-228ENST00000633402 KIAA2012Q0VF49 1180 aa11.6□□□□□ -0.55
LINC01002-228ENST00000633402 AOC3Q16853 763 aa11.6□□□□□ -0.55
LINC01002-228ENST00000633402 CST9Q5W186 159 aa11.6□□□□□ -0.55
LINC01002-228ENST00000633402 RUNDC1Q96C34 613 aa11.6□□□□□ -0.55
LINC01002-228ENST00000633402 CHPF2Q9P2E5 772 aa11.6□□□□□ -0.55
LINC01002-228ENST00000633402 ZNRF3Q9ULT6 936 aa11.6□□□□□ -0.55
LINC01002-228ENST00000633402 GJA3Q9Y6H8 435 aa11.6□□□□□ -0.55
LINC01002-228ENST00000633402 PPIP5K2O43314 1243 aa11.59□□□□□ -0.55
LINC01002-228ENST00000633402 FMR1Q06787 632 aaKnown RBP eCLIP11.59□□□□□ -0.55
LINC01002-228ENST00000633402 TRIM28Q13263 835 aaKnown RBP11.59□□□□□ -0.55
LINC01002-228ENST00000633402 NIM1KQ8IY84 436 aa11.59□□□□□ -0.55
LINC01002-228ENST00000633402 PLBD2Q8NHP8 589 aa11.59□□□□□ -0.55
LINC01002-228ENST00000633402 CLEC11AQ9Y240 323 aa11.59□□□□□ -0.55
LINC01002-228ENST00000633402 SH3TC1Q8TE82 1336 aa11.59□□□□□ -0.55
LINC01002-228ENST00000633402 LMOD1P29536 600 aaPredicted RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms