RNA–Protein interactions for RNA: ENST00000629570.1

LINC00550-202, long intergenic non-protein coding RNA 550, humanhuman

TSL 3

Gene LINC00550, Length 317 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-202ENST00000629570 AK7Q96M32 723 aa7.28□□□□□ -1.24
LINC00550-202ENST00000629570 NBPF3Q9H094 633 aa7.28□□□□□ -1.24
LINC00550-202ENST00000629570 PCDHGA10Q9Y5H3 936 aa7.28□□□□□ -1.24
LINC00550-202ENST00000629570 HEG1Q9ULI3 1381 aa7.28□□□□□ -1.24
LINC00550-202ENST00000629570 KDM3BQ7LBC6 1761 aa7.28□□□□□ -1.24
LINC00550-202ENST00000629570 CNTNAP4Q9C0A0 1308 aa7.27□□□□□ -1.24
LINC00550-202ENST00000629570 PRAMEF22A3QJZ6 481 aa7.27□□□□□ -1.25
LINC00550-202ENST00000629570 PPP1R3GB7ZBB8 358 aa7.27□□□□□ -1.25
LINC00550-202ENST00000629570 PHF14O94880 888 aa7.27□□□□□ -1.25
LINC00550-202ENST00000629570 ZBTB7AO95365 584 aa7.27□□□□□ -1.25
LINC00550-202ENST00000629570 VSIG10Q8N0Z9 540 aa7.27□□□□□ -1.25
LINC00550-202ENST00000629570 FMNL2Q96PY5 1086 aa7.27□□□□□ -1.25
LINC00550-202ENST00000629570 TSPYL4Q9UJ04 414 aa7.27□□□□□ -1.25
LINC00550-202ENST00000629570 UBR3Q6ZT12 1888 aa7.27□□□□□ -1.25
LINC00550-202ENST00000629570 MYH14Q7Z406 1995 aaKnown RBP7.26□□□□□ -1.25
LINC00550-202ENST00000629570 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.26□□□□□ -1.25
LINC00550-202ENST00000629570 CYP19A1P11511 503 aaPredicted RBP7.26□□□□□ -1.25
LINC00550-202ENST00000629570 PROX2Q3B8N5 592 aa7.26□□□□□ -1.25
LINC00550-202ENST00000629570 IFFO2Q5TF58 517 aa7.26□□□□□ -1.25
LINC00550-202ENST00000629570 INTS5Q6P9B9 1019 aaKnown RBP7.26□□□□□ -1.25
LINC00550-202ENST00000629570 COL23A1Q86Y22 540 aaPredicted RBP7.26□□□□□ -1.25
LINC00550-202ENST00000629570 ZBTB1Q9Y2K1 713 aa7.26□□□□□ -1.25
LINC00550-202ENST00000629570 SALL2Q9Y467 1007 aaPredicted RBP7.26□□□□□ -1.25
LINC00550-202ENST00000629570 QSER1Q2KHR3 1735 aa7.26□□□□□ -1.25
LINC00550-202ENST00000629570 CHL1O00533 1208 aa7.25□□□□□ -1.25
LINC00550-202ENST00000629570 COL9A1P20849 921 aa7.25□□□□□ -1.25
LINC00550-202ENST00000629570 SSFA2P28290 1259 aa7.25□□□□□ -1.25
LINC00550-202ENST00000629570 EIF4A1P60842 406 aaKnown RBP7.25□□□□□ -1.25
LINC00550-202ENST00000629570 KRT24Q2M2I5 525 aa7.25□□□□□ -1.25
LINC00550-202ENST00000629570 RC3H1Q5TC82 1133 aaKnown RBP7.25□□□□□ -1.25
LINC00550-202ENST00000629570 WWC1Q8IX03 1113 aa7.25□□□□□ -1.25
LINC00550-202ENST00000629570 CCDC87Q9NVE4 849 aa7.25□□□□□ -1.25
LINC00550-202ENST00000629570 LAS1LQ9Y4W2 734 aaKnown RBP7.25□□□□□ -1.25
LINC00550-202ENST00000629570 USP16Q9Y5T5 823 aa7.25□□□□□ -1.25
LINC00550-202ENST00000629570 LRP5O75197 1615 aa7.25□□□□□ -1.25
LINC00550-202ENST00000629570 SOS1Q07889 1333 aaPredicted RBP7.25□□□□□ -1.25
LINC00550-202ENST00000629570 C4AP0C0L4 1744 aa7.24□□□□□ -1.25
LINC00550-202ENST00000629570 GIGYF1O75420 1035 aaPredicted RBP7.24□□□□□ -1.25
LINC00550-202ENST00000629570 RPS6KA4O75676 772 aa7.24□□□□□ -1.25
LINC00550-202ENST00000629570 STARD3NLO95772 234 aa7.24□□□□□ -1.25
LINC00550-202ENST00000629570 A1BGP04217 495 aa7.24□□□□□ -1.25
LINC00550-202ENST00000629570 SNRPA1P09661 255 aaKnown RBP7.24□□□□□ -1.25
LINC00550-202ENST00000629570 ZNF853P0CG23 659 aa7.24□□□□□ -1.25
LINC00550-202ENST00000629570 HMGB2P26583 209 aaKnown RBP7.24□□□□□ -1.25
LINC00550-202ENST00000629570 CANXP27824 592 aaKnown RBP7.24□□□□□ -1.25
LINC00550-202ENST00000629570 PIP4K2AP48426 406 aaPredicted RBP7.24□□□□□ -1.25
LINC00550-202ENST00000629570 CCDC27Q2M243 656 aa7.24□□□□□ -1.25
LINC00550-202ENST00000629570 MSL1Q68DK7 614 aa7.24□□□□□ -1.25
LINC00550-202ENST00000629570 TYW1BQ6NUM6 668 aa7.24□□□□□ -1.25
LINC00550-202ENST00000629570 CFAP44Q96MT7 982 aa7.24□□□□□ -1.25
LINC00550-202ENST00000629570 MTFR1LQ9H019 292 aa7.24□□□□□ -1.25
LINC00550-202ENST00000629570 MBIPQ9NS73 344 aa7.24□□□□□ -1.25
LINC00550-202ENST00000629570 RABGEF1Q9UJ41 708 aa7.24□□□□□ -1.25
LINC00550-202ENST00000629570 RTCBQ9Y3I0 505 aaKnown RBP7.24□□□□□ -1.25
LINC00550-202ENST00000629570 LAMB4A4D0S4 1761 aa7.23□□□□□ -1.25
LINC00550-202ENST00000629570 COL15A1P39059 1388 aa7.23□□□□□ -1.25
LINC00550-202ENST00000629570 TRAPPC3LQ5T215 181 aa7.23□□□□□ -1.25
LINC00550-202ENST00000629570 FLAD1Q8NFF5 587 aa7.23□□□□□ -1.25
LINC00550-202ENST00000629570 ARHGEF1Q92888 912 aaKnown RBP7.23□□□□□ -1.25
LINC00550-202ENST00000629570 TSR2Q969E8 191 aaKnown RBP7.23□□□□□ -1.25
LINC00550-202ENST00000629570 FBXW7Q969H0 707 aa7.23□□□□□ -1.25
LINC00550-202ENST00000629570 SPON1Q9HCB6 807 aa7.23□□□□□ -1.25
LINC00550-202ENST00000629570 IFT57Q9NWB7 429 aa7.23□□□□□ -1.25
LINC00550-202ENST00000629570 BABAM1Q9NWV8 329 aa7.23□□□□□ -1.25
LINC00550-202ENST00000629570 SRP68Q9UHB9 627 aaKnown RBP7.23□□□□□ -1.25
LINC00550-202ENST00000629570 ZNF330Q9Y3S2 320 aaPredicted RBP7.23□□□□□ -1.25
LINC00550-202ENST00000629570 NBPF26B4DH59 902 aa7.22□□□□□ -1.25
LINC00550-202ENST00000629570 EIF5P55010 431 aaKnown RBP7.22□□□□□ -1.25
LINC00550-202ENST00000629570 GNAI1P63096 354 aa7.22□□□□□ -1.25
LINC00550-202ENST00000629570 CALD1Q05682 793 aaKnown RBP7.22□□□□□ -1.25
LINC00550-202ENST00000629570 NBPF10Q6P3W6 841 aaKnown RBP7.22□□□□□ -1.25
LINC00550-202ENST00000629570 NBPF15Q8N660 670 aa7.22□□□□□ -1.25
LINC00550-202ENST00000629570 ANKK1Q8NFD2 765 aa7.22□□□□□ -1.25
LINC00550-202ENST00000629570 SLC16A10Q8TF71 515 aa7.22□□□□□ -1.25
LINC00550-202ENST00000629570 TEX13AQ9BXU3 409 aaPredicted RBP7.22□□□□□ -1.25
LINC00550-202ENST00000629570 ZNF521Q96K83 1311 aa7.22□□□□□ -1.25
LINC00550-202ENST00000629570 USP42Q9H9J4 1324 aaKnown RBP7.22□□□□□ -1.25
LINC00550-202ENST00000629570 RGS20O76081 388 aa7.21□□□□□ -1.26
LINC00550-202ENST00000629570 GYS1P13807 737 aa7.21□□□□□ -1.26
LINC00550-202ENST00000629570 RFC4P35249 363 aa7.21□□□□□ -1.26
LINC00550-202ENST00000629570 IL16Q14005 1332 aa7.21□□□□□ -1.26
LINC00550-202ENST00000629570 FANCIQ9NVI1 1328 aa7.21□□□□□ -1.26
LINC00550-202ENST00000629570 COL24A1Q17RW2 1714 aa7.21□□□□□ -1.26
LINC00550-202ENST00000629570 SCN7AQ01118 1682 aa7.2□□□□□ -1.26
LINC00550-202ENST00000629570 ELL2O00472 640 aaPredicted RBP7.2□□□□□ -1.26
LINC00550-202ENST00000629570 DPYSL4O14531 572 aa7.2□□□□□ -1.26
LINC00550-202ENST00000629570 ANXA1P04083 346 aa7.2□□□□□ -1.26
LINC00550-202ENST00000629570 EIF2S2P20042 333 aaKnown RBP7.2□□□□□ -1.26
LINC00550-202ENST00000629570 IL6STP40189 918 aaPredicted RBP7.2□□□□□ -1.26
LINC00550-202ENST00000629570 BCAMP50895 628 aa7.2□□□□□ -1.26
LINC00550-202ENST00000629570 CAMK2BQ13554 666 aa7.2□□□□□ -1.26
LINC00550-202ENST00000629570 PROSER3Q2NL68 480 aa7.2□□□□□ -1.26
LINC00550-202ENST00000629570 DUSP27Q5VZP5 1158 aa7.2□□□□□ -1.26
LINC00550-202ENST00000629570 USPL1Q5W0Q7 1092 aa7.2□□□□□ -1.26
LINC00550-202ENST00000629570 WDR63Q8IWG1 891 aa7.2□□□□□ -1.26
LINC00550-202ENST00000629570 TSPYL6Q8N831 410 aa7.2□□□□□ -1.26
LINC00550-202ENST00000629570 C8orf58Q8NAV2 365 aa7.2□□□□□ -1.26
LINC00550-202ENST00000629570 NECTIN2Q92692 538 aa7.2□□□□□ -1.26
LINC00550-202ENST00000629570 TBC1D2BQ9UPU7 963 aa7.2□□□□□ -1.26
LINC00550-202ENST00000629570 MMP10P09238 476 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms