RNA–Protein interactions for RNA: ENST00000622183.1

CPNE3-213, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 156 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-213ENST00000622183 ALG1LQ6GMV1 187 aa8.06□□□□□ -1.12
CPNE3-213ENST00000622183 DUSP9Q99956 384 aaKnown RBP8.06□□□□□ -1.12
CPNE3-213ENST00000622183 DNMT3LQ9UJW3 386 aa8.06□□□□□ -1.12
CPNE3-213ENST00000622183 RTCBQ9Y3I0 505 aaKnown RBP8.06□□□□□ -1.12
CPNE3-213ENST00000622183 NRG2O14511 850 aaPredicted RBP8.05□□□□□ -1.12
CPNE3-213ENST00000622183 AXIN1O15169 862 aa8.05□□□□□ -1.12
CPNE3-213ENST00000622183 RECKO95980 971 aa8.05□□□□□ -1.12
CPNE3-213ENST00000622183 F11P03951 625 aa8.05□□□□□ -1.12
CPNE3-213ENST00000622183 TCF3P15923 654 aa8.05□□□□□ -1.12
CPNE3-213ENST00000622183 TYRO3Q06418 890 aa8.05□□□□□ -1.12
CPNE3-213ENST00000622183 FBF1Q8TES7 1133 aa8.05□□□□□ -1.12
CPNE3-213ENST00000622183 CSRNP1Q96S65 589 aa8.05□□□□□ -1.12
CPNE3-213ENST00000622183 PARP2Q9UGN5 583 aa8.05□□□□□ -1.12
CPNE3-213ENST00000622183 WWC3Q9ULE0 1092 aa8.05□□□□□ -1.12
CPNE3-213ENST00000622183 FNDC3AQ9Y2H6 1198 aaKnown RBP8.05□□□□□ -1.12
CPNE3-213ENST00000622183 EIF1AYO14602 144 aaKnown RBP8.04□□□□□ -1.12
CPNE3-213ENST00000622183 ITGAEP38570 1179 aa8.04□□□□□ -1.12
CPNE3-213ENST00000622183 XPCQ01831 940 aaPredicted RBP8.04□□□□□ -1.12
CPNE3-213ENST00000622183 ORC1Q13415 861 aa8.04□□□□□ -1.12
CPNE3-213ENST00000622183 TRIP4Q15650 581 aaPredicted RBP8.04□□□□□ -1.12
CPNE3-213ENST00000622183 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.04□□□□□ -1.12
CPNE3-213ENST00000622183 SAMD5Q5TGI4 173 aa8.04□□□□□ -1.12
CPNE3-213ENST00000622183 XKR5Q6UX68 686 aa8.04□□□□□ -1.12
CPNE3-213ENST00000622183 TMC4Q7Z404 712 aa8.04□□□□□ -1.12
CPNE3-213ENST00000622183 NLRP8Q86W28 1048 aa8.04□□□□□ -1.12
CPNE3-213ENST00000622183 SETDB2Q96T68 719 aa8.04□□□□□ -1.12
CPNE3-213ENST00000622183 DNAJC25Q9H1X3 360 aa8.04□□□□□ -1.12
CPNE3-213ENST00000622183 GPAMQ9HCL2 828 aa8.04□□□□□ -1.12
CPNE3-213ENST00000622183 A6NHS1 94 aa8.03□□□□□ -1.12
CPNE3-213ENST00000622183 EPB42P16452 691 aa8.03□□□□□ -1.12
CPNE3-213ENST00000622183 PDE12Q6L8Q7 609 aaKnown RBP8.03□□□□□ -1.12
CPNE3-213ENST00000622183 RUBCNLQ9H714 662 aa8.03□□□□□ -1.12
CPNE3-213ENST00000622183 USP20Q9Y2K6 914 aa8.03□□□□□ -1.12
CPNE3-213ENST00000622183 KCNMB2Q9Y691 235 aa8.03□□□□□ -1.12
CPNE3-213ENST00000622183 GJA3Q9Y6H8 435 aa8.03□□□□□ -1.12
CPNE3-213ENST00000622183 UBAP1LF5GYI3 381 aa8.02□□□□□ -1.13
CPNE3-213ENST00000622183 GFRA3O60609 400 aa8.02□□□□□ -1.13
CPNE3-213ENST00000622183 DAB2P98082 770 aa8.02□□□□□ -1.13
CPNE3-213ENST00000622183 CMTR1Q8N1G2 835 aaKnown RBP8.02□□□□□ -1.13
CPNE3-213ENST00000622183 PGBD3Q8N328 593 aa8.02□□□□□ -1.13
CPNE3-213ENST00000622183 CEP63Q96MT8 703 aa8.02□□□□□ -1.13
CPNE3-213ENST00000622183 CFHR5Q9BXR6 569 aa8.02□□□□□ -1.13
CPNE3-213ENST00000622183 C11orf16Q9NQ32 467 aa8.02□□□□□ -1.13
CPNE3-213ENST00000622183 SENP3-EIF4A1A0A087X0R7 540 aa8.01□□□□□ -1.13
CPNE3-213ENST00000622183 MAN1A2O60476 641 aa8.01□□□□□ -1.13
CPNE3-213ENST00000622183 CPNE3O75131 537 aaKnown RBP8.01□□□□□ -1.13
CPNE3-213ENST00000622183 TNFRSF21O75509 655 aa8.01□□□□□ -1.13
CPNE3-213ENST00000622183 GRNP28799 593 aaKnown RBP8.01□□□□□ -1.13
CPNE3-213ENST00000622183 GNA15P30679 374 aa8.01□□□□□ -1.13
CPNE3-213ENST00000622183 PSMD2Q13200 908 aa8.01□□□□□ -1.13
CPNE3-213ENST00000622183 TSNAXIP1Q2TAA8 658 aa8.01□□□□□ -1.13
CPNE3-213ENST00000622183 SNX29Q8TEQ0 813 aa8.01□□□□□ -1.13
CPNE3-213ENST00000622183 FAM161BQ96MY7 647 aa8.01□□□□□ -1.13
CPNE3-213ENST00000622183 BACH2Q9BYV9 841 aa8.01□□□□□ -1.13
CPNE3-213ENST00000622183 RNF19AQ9NV58 838 aa8.01□□□□□ -1.13
CPNE3-213ENST00000622183 SORBS3O60504 671 aa8□□□□□ -1.13
CPNE3-213ENST00000622183 EGFRP00533 1210 aa8□□□□□ -1.13
CPNE3-213ENST00000622183 LBRQ14739 615 aaKnown RBP8□□□□□ -1.13
CPNE3-213ENST00000622183 EFHC2Q5JST6 749 aa8□□□□□ -1.13
CPNE3-213ENST00000622183 ZNF438Q7Z4V0 828 aa8□□□□□ -1.13
CPNE3-213ENST00000622183 FRMD6Q96NE9 622 aa8□□□□□ -1.13
CPNE3-213ENST00000622183 GAS2L1Q99501 681 aaPredicted RBP8□□□□□ -1.13
CPNE3-213ENST00000622183 ELP3Q9H9T3 547 aa8□□□□□ -1.13
CPNE3-213ENST00000622183 MRS2Q9HD23 443 aa8□□□□□ -1.13
CPNE3-213ENST00000622183 ATP13A2Q9NQ11 1180 aa8□□□□□ -1.13
CPNE3-213ENST00000622183 XYLBO75191 536 aa7.99□□□□□ -1.13
CPNE3-213ENST00000622183 KCNQ4P56696 695 aa7.99□□□□□ -1.13
CPNE3-213ENST00000622183 LAPTM4AQ15012 233 aa7.99□□□□□ -1.13
CPNE3-213ENST00000622183 LDLRAD1Q5T700 205 aa7.99□□□□□ -1.13
CPNE3-213ENST00000622183 BRD7Q9NPI1 651 aa7.99□□□□□ -1.13
CPNE3-213ENST00000622183 AAASQ9NRG9 546 aa7.99□□□□□ -1.13
CPNE3-213ENST00000622183 FOXD3Q9UJU5 478 aaPredicted RBP7.99□□□□□ -1.13
CPNE3-213ENST00000622183 SCAMP3O14828 347 aaKnown RBP7.98□□□□□ -1.13
CPNE3-213ENST00000622183 FIGNL1Q6PIW4 674 aa7.98□□□□□ -1.13
CPNE3-213ENST00000622183 ZCCHC2Q9C0B9 1178 aaKnown RBP7.98□□□□□ -1.13
CPNE3-213ENST00000622183 ST8SIA5O15466 376 aa7.97□□□□□ -1.13
CPNE3-213ENST00000622183 PHACTR2O75167 634 aa7.97□□□□□ -1.13
CPNE3-213ENST00000622183 FAM157BP0CG42 384 aa7.97□□□□□ -1.13
CPNE3-213ENST00000622183 ZFYVE28Q9HCC9 887 aa7.97□□□□□ -1.13
CPNE3-213ENST00000622183 TMEM63CQ9P1W3 806 aa7.97□□□□□ -1.13
CPNE3-213ENST00000622183 VTI1BQ9UEU0 232 aa7.97□□□□□ -1.13
CPNE3-213ENST00000622183 SPG7Q9UQ90 795 aa7.97□□□□□ -1.13
CPNE3-213ENST00000622183 EFSO43281 561 aa7.96□□□□□ -1.14
CPNE3-213ENST00000622183 THBS1P07996 1170 aa7.96□□□□□ -1.14
CPNE3-213ENST00000622183 PTSQ03393 145 aa7.96□□□□□ -1.14
CPNE3-213ENST00000622183 USPL1Q5W0Q7 1092 aa7.96□□□□□ -1.14
CPNE3-213ENST00000622183 NLRP13Q86W25 1043 aa7.96□□□□□ -1.14
CPNE3-213ENST00000622183 CCDC74AQ96AQ1 378 aa7.96□□□□□ -1.14
CPNE3-213ENST00000622183 ABI2Q9NYB9 513 aaPredicted RBP7.96□□□□□ -1.14
CPNE3-213ENST00000622183 KCNH4Q9UQ05 1017 aa7.96□□□□□ -1.14
CPNE3-213ENST00000622183 PCDHGC4Q9Y5F7 938 aa7.96□□□□□ -1.14
CPNE3-213ENST00000622183 AK5Q9Y6K8 562 aa7.96□□□□□ -1.14
CPNE3-213ENST00000622183 SLC35F4A4IF30 521 aa7.95□□□□□ -1.14
CPNE3-213ENST00000622183 ATXN7O15265 892 aaPredicted RBP7.95□□□□□ -1.14
CPNE3-213ENST00000622183 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.95□□□□□ -1.14
CPNE3-213ENST00000622183 RIPOR1Q6ZS17 1223 aa7.95□□□□□ -1.14
CPNE3-213ENST00000622183 CHRDQ9H2X0 955 aa7.95□□□□□ -1.14
CPNE3-213ENST00000622183 SOBPA7XYQ1 873 aa7.94□□□□□ -1.14
CPNE3-213ENST00000622183 H7C1W4 665 aa7.94□□□□□ -1.14
CPNE3-213ENST00000622183 GIPC1O14908 333 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms