RNA–Protein interactions for RNA: ENST00000620902.1

MALAT1-217, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 3 BASIC

Gene MALAT1, Length 352 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-217ENST00000620902 NINLQ9Y2I6 1382 aa13.66□□□□□ -0.22
MALAT1-217ENST00000620902 USP17L5A8MUK1 530 aa13.65□□□□□ -0.22
MALAT1-217ENST00000620902 BAG6P46379 1132 aa13.65□□□□□ -0.22
MALAT1-217ENST00000620902 UCN2Q96RP3 112 aa13.65□□□□□ -0.22
MALAT1-217ENST00000620902 HRH3Q9Y5N1 445 aa13.65□□□□□ -0.22
MALAT1-217ENST00000620902 PNPLA6Q8IY17 1366 aa13.65□□□□□ -0.22
MALAT1-217ENST00000620902 WASHC2CQ9Y4E1 1318 aa13.64□□□□□ -0.23
MALAT1-217ENST00000620902 CENPCQ03188 943 aa13.64□□□□□ -0.23
MALAT1-217ENST00000620902 NCOA4Q13772 614 aa13.64□□□□□ -0.23
MALAT1-217ENST00000620902 PLEKHM2Q8IWE5 1019 aa13.64□□□□□ -0.23
MALAT1-217ENST00000620902 SPHKAPQ2M3C7 1700 aa13.64□□□□□ -0.23
MALAT1-217ENST00000620902 ATP9BO43861 1147 aa13.63□□□□□ -0.23
MALAT1-217ENST00000620902 WDR44Q5JSH3 913 aa13.63□□□□□ -0.23
MALAT1-217ENST00000620902 TBC1D9Q6ZT07 1266 aa13.63□□□□□ -0.23
MALAT1-217ENST00000620902 BRINP3Q76B58 766 aa13.63□□□□□ -0.23
MALAT1-217ENST00000620902 LRRC59Q96AG4 307 aaKnown RBP13.63□□□□□ -0.23
MALAT1-217ENST00000620902 CALR3Q96L12 384 aaKnown RBP13.63□□□□□ -0.23
MALAT1-217ENST00000620902 ETNK1Q9HBU6 452 aa13.63□□□□□ -0.23
MALAT1-217ENST00000620902 PPP1R1BQ9UD71 204 aaPredicted RBP13.63□□□□□ -0.23
MALAT1-217ENST00000620902 CHD4Q14839 1912 aa13.62□□□□□ -0.23
MALAT1-217ENST00000620902 SPATA31C2B4DYI2 1134 aa13.62□□□□□ -0.23
MALAT1-217ENST00000620902 SUPT5HO00267 1087 aaKnown RBP13.62□□□□□ -0.23
MALAT1-217ENST00000620902 VSIG8P0DPA2 414 aa13.62□□□□□ -0.23
MALAT1-217ENST00000620902 RANGAP1P46060 587 aaPredicted RBP13.62□□□□□ -0.23
MALAT1-217ENST00000620902 WASLO00401 505 aaPredicted RBP13.61□□□□□ -0.23
MALAT1-217ENST00000620902 SLC26A8Q96RN1 970 aa13.61□□□□□ -0.23
MALAT1-217ENST00000620902 PCDHGA11Q9Y5H2 935 aa13.61□□□□□ -0.23
MALAT1-217ENST00000620902 BRWD3Q6RI45 1802 aa13.61□□□□□ -0.23
MALAT1-217ENST00000620902 INHAP05111 366 aa13.6□□□□□ -0.23
MALAT1-217ENST00000620902 GTF2E1P29083 439 aaPredicted RBP13.6□□□□□ -0.23
MALAT1-217ENST00000620902 PRELPP51888 382 aa13.6□□□□□ -0.23
MALAT1-217ENST00000620902 GDF10P55107 478 aa13.6□□□□□ -0.23
MALAT1-217ENST00000620902 TRIM50Q86XT4 487 aa13.6□□□□□ -0.23
MALAT1-217ENST00000620902 ZSCAN10Q96SZ4 725 aaPredicted RBP13.6□□□□□ -0.23
MALAT1-217ENST00000620902 MROH1Q8NDA8 1641 aa13.6□□□□□ -0.23
MALAT1-217ENST00000620902 GPATCH8Q9UKJ3 1502 aaKnown RBP13.59□□□□□ -0.23
MALAT1-217ENST00000620902 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.59□□□□□ -0.23
MALAT1-217ENST00000620902 USP17L3A6NCW0 530 aa13.59□□□□□ -0.23
MALAT1-217ENST00000620902 USP17L4A6NCW7 530 aa13.59□□□□□ -0.23
MALAT1-217ENST00000620902 WIPF1O43516 503 aa13.59□□□□□ -0.23
MALAT1-217ENST00000620902 SCNN1DP51172 638 aa13.59□□□□□ -0.23
MALAT1-217ENST00000620902 POU4F2Q12837 409 aa13.59□□□□□ -0.23
MALAT1-217ENST00000620902 LCE2CQ5TA81 110 aa13.59□□□□□ -0.23
MALAT1-217ENST00000620902 USP17L2Q6R6M4 530 aa13.59□□□□□ -0.23
MALAT1-217ENST00000620902 USP17L1Q7RTZ2 530 aa13.59□□□□□ -0.23
MALAT1-217ENST00000620902 DEPDC4Q8N2C3 294 aa13.59□□□□□ -0.23
MALAT1-217ENST00000620902 ERVK-7P63135 1459 aa13.59□□□□□ -0.23
MALAT1-217ENST00000620902 ASXL1Q8IXJ9 1541 aa13.59□□□□□ -0.23
MALAT1-217ENST00000620902 CDC42BPAQ5VT25 1732 aa13.59□□□□□ -0.23
MALAT1-217ENST00000620902 RHOQP17081 205 aa13.58□□□□□ -0.24
MALAT1-217ENST00000620902 ITGA6P23229 1130 aa13.58□□□□□ -0.24
MALAT1-217ENST00000620902 HNRNPMP52272 730 aaKnown RBP eCLIP13.58□□□□□ -0.24
MALAT1-217ENST00000620902 GTF2IP78347 998 aa13.58□□□□□ -0.24
MALAT1-217ENST00000620902 NBPF10Q6P3W6 841 aaKnown RBP13.58□□□□□ -0.24
MALAT1-217ENST00000620902 TAS1R3Q7RTX0 852 aa13.58□□□□□ -0.24
MALAT1-217ENST00000620902 C14orf37Q86TY3 774 aa13.58□□□□□ -0.24
MALAT1-217ENST00000620902 NBPF15Q8N660 670 aa13.58□□□□□ -0.24
MALAT1-217ENST00000620902 NANOS1Q8WY41 292 aaKnown RBP13.58□□□□□ -0.24
MALAT1-217ENST00000620902 FHDC1Q9C0D6 1143 aaPredicted RBP13.58□□□□□ -0.24
MALAT1-217ENST00000620902 ZNF777Q9ULD5 760 aaPredicted RBP13.58□□□□□ -0.24
MALAT1-217ENST00000620902 CAMSAP2Q08AD1 1489 aa13.58□□□□□ -0.24
MALAT1-217ENST00000620902 RALGAPBQ86X10 1494 aa13.58□□□□□ -0.24
MALAT1-217ENST00000620902 ERBB4Q15303 1308 aa13.58□□□□□ -0.24
MALAT1-217ENST00000620902 TET3O43151 1660 aa13.57□□□□□ -0.24
MALAT1-217ENST00000620902 ATF3P18847 181 aa13.57□□□□□ -0.24
MALAT1-217ENST00000620902 ZMYND15Q9H091 742 aa13.57□□□□□ -0.24
MALAT1-217ENST00000620902 DYRK1BQ9Y463 629 aa13.57□□□□□ -0.24
MALAT1-217ENST00000620902 NCOA3Q9Y6Q9 1424 aa13.56□□□□□ -0.24
MALAT1-217ENST00000620902 KIF3BO15066 747 aa13.56□□□□□ -0.24
MALAT1-217ENST00000620902 STAU1O95793 577 aaKnown RBP13.56□□□□□ -0.24
MALAT1-217ENST00000620902 TFIP11Q9UBB9 837 aaKnown RBP13.56□□□□□ -0.24
MALAT1-217ENST00000620902 ATP1A2P50993 1020 aa13.55□□□□□ -0.24
MALAT1-217ENST00000620902 TLR1Q15399 786 aa13.55□□□□□ -0.24
MALAT1-217ENST00000620902 GNASQ5JWF2 1037 aa13.55□□□□□ -0.24
MALAT1-217ENST00000620902 TMEM214Q6NUQ4 689 aaKnown RBP13.55□□□□□ -0.24
MALAT1-217ENST00000620902 SLC4A9Q96Q91 983 aa13.55□□□□□ -0.24
MALAT1-217ENST00000620902 TMEM2Q9UHN6 1383 aa13.55□□□□□ -0.24
MALAT1-217ENST00000620902 PTCH1Q13635 1447 aa13.55□□□□□ -0.24
MALAT1-217ENST00000620902 GMPRP36959 345 aa13.54□□□□□ -0.24
MALAT1-217ENST00000620902 PSME1Q06323 249 aa13.54□□□□□ -0.24
MALAT1-217ENST00000620902 PPARGC1BQ86YN6 1023 aaKnown RBP13.54□□□□□ -0.24
MALAT1-217ENST00000620902 PPP1R12CQ9BZL4 782 aa13.54□□□□□ -0.24
MALAT1-217ENST00000620902 DHX29Q7Z478 1369 aaKnown RBP13.54□□□□□ -0.24
MALAT1-217ENST00000620902 ARHGAP35Q9NRY4 1499 aa13.54□□□□□ -0.24
MALAT1-217ENST00000620902 PALM3A6NDB9 673 aaPredicted RBP13.53□□□□□ -0.24
MALAT1-217ENST00000620902 TMEM229AB2RXF0 380 aa13.53□□□□□ -0.24
MALAT1-217ENST00000620902 BACH1O14867 736 aa13.53□□□□□ -0.24
MALAT1-217ENST00000620902 SMTNP53814 917 aa13.53□□□□□ -0.24
MALAT1-217ENST00000620902 GMCL1Q96IK5 515 aa13.53□□□□□ -0.24
MALAT1-217ENST00000620902 TIMMDC1Q9NPL8 285 aa13.53□□□□□ -0.24
MALAT1-217ENST00000620902 MAFBQ9Y5Q3 323 aaPredicted RBP13.53□□□□□ -0.24
MALAT1-217ENST00000620902 GLI3P10071 1580 aa13.53□□□□□ -0.24
MALAT1-217ENST00000620902 MKRN1Q9UHC7 482 aaKnown RBP13.52□□□□□ -0.25
MALAT1-217ENST00000620902 CHD2O14647 1828 aaKnown RBP13.52□□□□□ -0.25
MALAT1-217ENST00000620902 SV2AQ7L0J3 742 aa13.51□□□□□ -0.25
MALAT1-217ENST00000620902 RHBDD1Q8TEB9 315 aa13.51□□□□□ -0.25
MALAT1-217ENST00000620902 C19orf44Q9H6X5 657 aa13.51□□□□□ -0.25
MALAT1-217ENST00000620902 KIAA1107Q9UPP5 1409 aa13.5□□□□□ -0.25
MALAT1-217ENST00000620902 SPON1Q9HCB6 807 aa13.5□□□□□ -0.25
MALAT1-217ENST00000620902 SERTAD1Q9UHV2 236 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms