RNA–Protein interactions for RNA: ENST00000617835.4

FLT1-208, Transcript of fms related tyrosine kinase 1, human

TSL 1 (best) BASIC

Gene FLT1, Length 434 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FLT1-208	ENST00000617835	CHPF2	Q9P2E5	772 aa		11.5	□□□□□ -0.57
FLT1-208	ENST00000617835	RIC1	Q4ADV7	1423 aa		11.5	□□□□□ -0.57
FLT1-208	ENST00000617835	SNED1	Q8TER0	1413 aa		11.5	□□□□□ -0.57
FLT1-208	ENST00000617835	APAF1	O14727	1248 aa		11.49	□□□□□ -0.57
FLT1-208	ENST00000617835	ALDH1B1	P30837	517 aa		11.49	□□□□□ -0.57
FLT1-208	ENST00000617835	HOXA10	P31260	410 aa	Predicted RBP	11.49	□□□□□ -0.57
FLT1-208	ENST00000617835	CCDC184	Q52MB2	194 aa		11.49	□□□□□ -0.57
FLT1-208	ENST00000617835	PARP10	Q53GL7	1025 aa		11.49	□□□□□ -0.57
FLT1-208	ENST00000617835	RTKN2	Q8IZC4	609 aa		11.49	□□□□□ -0.57
FLT1-208	ENST00000617835	UTP14A	Q9BVJ6	771 aa	Known RBP	11.49	□□□□□ -0.57
FLT1-208	ENST00000617835	DDX21	Q9NR30	783 aa	Known RBP eCLIP	11.49	□□□□□ -0.57
FLT1-208	ENST00000617835	FER1L6	Q2WGJ9	1857 aa		11.49	□□□□□ -0.57
FLT1-208	ENST00000617835	HCLS1	P14317	486 aa	Predicted RBP	11.48	□□□□□ -0.57
FLT1-208	ENST00000617835	HDGFL1	Q5TGJ6	251 aa		11.48	□□□□□ -0.57
FLT1-208	ENST00000617835	PPP1R42	Q7Z4L9	355 aa		11.48	□□□□□ -0.57
FLT1-208	ENST00000617835	NLRP10	Q86W26	655 aa		11.48	□□□□□ -0.57
FLT1-208	ENST00000617835	RBM17	Q96I25	401 aa	Known RBP	11.48	□□□□□ -0.57
FLT1-208	ENST00000617835	MBIP	Q9NS73	344 aa		11.48	□□□□□ -0.57
FLT1-208	ENST00000617835	COL4A5	P29400	1685 aa		11.48	□□□□□ -0.57
FLT1-208	ENST00000617835	ARFGEF2	Q9Y6D5	1785 aa		11.48	□□□□□ -0.57
FLT1-208	ENST00000617835	WDR90	Q96KV7	1748 aa		11.47	□□□□□ -0.57
FLT1-208	ENST00000617835	PPEF1	O14829	653 aa	Predicted RBP	11.47	□□□□□ -0.57
FLT1-208	ENST00000617835	IARS	P41252	1262 aa	Known RBP	11.47	□□□□□ -0.57
FLT1-208	ENST00000617835	DUSP27	Q5VZP5	1158 aa		11.47	□□□□□ -0.57
FLT1-208	ENST00000617835	KLRG1	Q96E93	195 aa		11.47	□□□□□ -0.57
FLT1-208	ENST00000617835	CFAP44	Q96MT7	982 aa		11.47	□□□□□ -0.57
FLT1-208	ENST00000617835	CACNA1S	Q13698	1873 aa		11.46	□□□□□ -0.57
FLT1-208	ENST00000617835	ZNF853	P0CG23	659 aa		11.46	□□□□□ -0.57
FLT1-208	ENST00000617835	TCIRG1	Q13488	830 aa		11.46	□□□□□ -0.57
FLT1-208	ENST00000617835	SLC10A5	Q5PT55	438 aa		11.46	□□□□□ -0.57
FLT1-208	ENST00000617835	L3MBTL3	Q96JM7	780 aa	Predicted RBP	11.46	□□□□□ -0.57
FLT1-208	ENST00000617835	CRAMP1	Q96RY5	1269 aa		11.46	□□□□□ -0.57
FLT1-208	ENST00000617835	PSMD1	Q99460	953 aa		11.46	□□□□□ -0.57
FLT1-208	ENST00000617835	ABCC4	O15439	1325 aa		11.45	□□□□□ -0.58
FLT1-208	ENST00000617835	ATP5J2-PTCD1	G3V325	749 aa		11.45	□□□□□ -0.58
FLT1-208	ENST00000617835	FZD9	O00144	591 aa		11.45	□□□□□ -0.58
FLT1-208	ENST00000617835	ELL2	O00472	640 aa	Predicted RBP	11.45	□□□□□ -0.58
FLT1-208	ENST00000617835	CHADL	Q6NUI6	762 aa		11.45	□□□□□ -0.58
FLT1-208	ENST00000617835	NLRP3	Q96P20	1036 aa		11.45	□□□□□ -0.58
FLT1-208	ENST00000617835	TAF1D	Q9H5J8	278 aa	Predicted RBP	11.45	□□□□□ -0.58
FLT1-208	ENST00000617835	TRMT112	Q9UI30	125 aa	Known RBP	11.45	□□□□□ -0.58
FLT1-208	ENST00000617835	NUP98	P52948	1817 aa		11.44	□□□□□ -0.58
FLT1-208	ENST00000617835	RNF123	Q5XPI4	1314 aa		11.44	□□□□□ -0.58
FLT1-208	ENST00000617835	HOXB7	P09629	217 aa		11.44	□□□□□ -0.58
FLT1-208	ENST00000617835	HSP90AB3P	Q58FF7	597 aa		11.44	□□□□□ -0.58
FLT1-208	ENST00000617835	PLBD2	Q8NHP8	589 aa		11.44	□□□□□ -0.58
FLT1-208	ENST00000617835	SH3TC1	Q8TE82	1336 aa		11.43	□□□□□ -0.58
FLT1-208	ENST00000617835	IQCA1L	A6NCM1	817 aa		11.43	□□□□□ -0.58
FLT1-208	ENST00000617835	AOC3	Q16853	763 aa		11.43	□□□□□ -0.58
FLT1-208	ENST00000617835	EAPP	Q56P03	285 aa	Predicted RBP	11.43	□□□□□ -0.58
FLT1-208	ENST00000617835	RTL5	Q5HYW3	569 aa	Predicted RBP	11.43	□□□□□ -0.58
FLT1-208	ENST00000617835	CC2D2B	Q6DHV5	1058 aa		11.43	□□□□□ -0.58
FLT1-208	ENST00000617835	ANKRD13D	Q6ZTN6	518 aa		11.43	□□□□□ -0.58
FLT1-208	ENST00000617835	LARGE2	Q8N3Y3	721 aa		11.43	□□□□□ -0.58
FLT1-208	ENST00000617835	JMY	Q8N9B5	988 aa		11.43	□□□□□ -0.58
FLT1-208	ENST00000617835	C8orf58	Q8NAV2	365 aa		11.43	□□□□□ -0.58
FLT1-208	ENST00000617835	FAM89A	Q96GI7	184 aa		11.43	□□□□□ -0.58
FLT1-208	ENST00000617835	ISCA1	Q9BUE6	129 aa		11.43	□□□□□ -0.58
FLT1-208	ENST00000617835	PHAX	Q9H814	394 aa	Known RBP	11.43	□□□□□ -0.58
FLT1-208	ENST00000617835	IFT57	Q9NWB7	429 aa		11.43	□□□□□ -0.58
FLT1-208	ENST00000617835	DBF4	Q9UBU7	674 aa	Predicted RBP	11.43	□□□□□ -0.58
FLT1-208	ENST00000617835	HACL1	Q9UJ83	578 aa		11.43	□□□□□ -0.58
FLT1-208	ENST00000617835	ATP6V0A2	Q9Y487	856 aa		11.43	□□□□□ -0.58
FLT1-208	ENST00000617835	GJA3	Q9Y6H8	435 aa		11.43	□□□□□ -0.58
FLT1-208	ENST00000617835	EPHX2	P34913	555 aa		11.42	□□□□□ -0.58
FLT1-208	ENST00000617835	GNAI1	P63096	354 aa		11.42	□□□□□ -0.58
FLT1-208	ENST00000617835	LDHD	Q86WU2	507 aa		11.42	□□□□□ -0.58
FLT1-208	ENST00000617835	JDP2	Q8WYK2	163 aa		11.42	□□□□□ -0.58
FLT1-208	ENST00000617835	HYPK	Q9NX55	129 aa		11.42	□□□□□ -0.58
FLT1-208	ENST00000617835	CCDC88A	Q3V6T2	1871 aa		11.42	□□□□□ -0.58
FLT1-208	ENST00000617835	PPIP5K2	O43314	1243 aa		11.41	□□□□□ -0.58
FLT1-208	ENST00000617835	GRAP	Q13588	217 aa		11.41	□□□□□ -0.58
FLT1-208	ENST00000617835	GPC2	Q8N158	579 aa		11.41	□□□□□ -0.58
FLT1-208	ENST00000617835	TSPYL6	Q8N831	410 aa		11.41	□□□□□ -0.58
FLT1-208	ENST00000617835	GRAPL	Q8TC17	118 aa	Predicted RBP	11.41	□□□□□ -0.58
FLT1-208	ENST00000617835	TSR2	Q969E8	191 aa	Known RBP	11.41	□□□□□ -0.58
FLT1-208	ENST00000617835	DICER1	Q9UPY3	1922 aa	Known RBP	11.41	□□□□□ -0.58
FLT1-208	ENST00000617835	COL4A1	P02462	1669 aa		11.4	□□□□□ -0.58
FLT1-208	ENST00000617835	BBOX1	O75936	387 aa		11.4	□□□□□ -0.58
FLT1-208	ENST00000617835	EIF6	P56537	245 aa	Known RBP	11.4	□□□□□ -0.58
FLT1-208	ENST00000617835	IFFO2	Q5TF58	517 aa		11.4	□□□□□ -0.58
FLT1-208	ENST00000617835	MAP1S	Q66K74	1059 aa	Predicted RBP	11.4	□□□□□ -0.58
FLT1-208	ENST00000617835	DPP8	Q6V1X1	898 aa	Predicted RBP	11.4	□□□□□ -0.58
FLT1-208	ENST00000617835	DDX46	Q7L014	1031 aa	Known RBP	11.4	□□□□□ -0.58
FLT1-208	ENST00000617835	NIM1K	Q8IY84	436 aa		11.4	□□□□□ -0.58
FLT1-208	ENST00000617835	JARID2	Q92833	1246 aa	Predicted RBP	11.4	□□□□□ -0.58
FLT1-208	ENST00000617835	MKRN1	Q9UHC7	482 aa	Known RBP	11.4	□□□□□ -0.58
FLT1-208	ENST00000617835	CLEC11A	Q9Y240	323 aa		11.4	□□□□□ -0.58
FLT1-208	ENST00000617835	PASK	Q96RG2	1323 aa		11.39	□□□□□ -0.59
FLT1-208	ENST00000617835	ITGBL1	O95965	494 aa	Predicted RBP	11.39	□□□□□ -0.59
FLT1-208	ENST00000617835	EPS15	P42566	896 aa		11.39	□□□□□ -0.59
FLT1-208	ENST00000617835	SCNN1D	P51172	638 aa		11.39	□□□□□ -0.59
FLT1-208	ENST00000617835	CALD1	Q05682	793 aa	Known RBP	11.39	□□□□□ -0.59
FLT1-208	ENST00000617835	GOLGA2	Q08379	1002 aa		11.39	□□□□□ -0.59
FLT1-208	ENST00000617835	GRIPAP1	Q4V328	841 aa		11.39	□□□□□ -0.59
FLT1-208	ENST00000617835	RIC3	Q7Z5B4	369 aa		11.39	□□□□□ -0.59
FLT1-208	ENST00000617835	SP8	Q8IXZ3	490 aa		11.39	□□□□□ -0.59
FLT1-208	ENST00000617835	CELF1	Q92879	486 aa	Known RBP	11.39	□□□□□ -0.59
FLT1-208	ENST00000617835	MYD88	Q99836	296 aa		11.39	□□□□□ -0.59
FLT1-208	ENST00000617835	RTFDC1	Q9BY42	306 aa	Predicted RBP	11.39	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 32 ms