RNA–Protein interactions for RNA: ENST00000616078.1

LINC01879-202, Transcript of long intergenic non-protein coding RNA 1879, humanhuman

Gene LINC01879, Length 1,455 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01879-202ENST00000616078 PPP1R42Q7Z4L9 355 aa17.04■□□□□ 0.32
LINC01879-202ENST00000616078 SYNE4Q8N205 404 aa17.04■□□□□ 0.32
LINC01879-202ENST00000616078 FZD9O00144 591 aa17.03■□□□□ 0.32
LINC01879-202ENST00000616078 EIF2S2P20042 333 aaKnown RBP17.03■□□□□ 0.32
LINC01879-202ENST00000616078 CRAMP1Q96RY5 1269 aa17.03■□□□□ 0.32
LINC01879-202ENST00000616078 TAF1DQ9H5J8 278 aaPredicted RBP17.03■□□□□ 0.32
LINC01879-202ENST00000616078 PCNTO95613 3336 aa17.02■□□□□ 0.32
LINC01879-202ENST00000616078 LDHDQ86WU2 507 aa17.02■□□□□ 0.32
LINC01879-202ENST00000616078 RBM17Q96I25 401 aaKnown RBP17.02■□□□□ 0.32
LINC01879-202ENST00000616078 ZNF541Q9H0D2 1346 aa17.02■□□□□ 0.31
LINC01879-202ENST00000616078 POTEIP0CG38 1075 aa17.01■□□□□ 0.31
LINC01879-202ENST00000616078 POTEJP0CG39 1038 aa17.01■□□□□ 0.31
LINC01879-202ENST00000616078 CREBZFQ9NS37 354 aa17.01■□□□□ 0.31
LINC01879-202ENST00000616078 RNF123Q5XPI4 1314 aa17.01■□□□□ 0.31
LINC01879-202ENST00000616078 CHL1O00533 1208 aa17■□□□□ 0.31
LINC01879-202ENST00000616078 PROSER3Q2NL68 480 aa17■□□□□ 0.31
LINC01879-202ENST00000616078 SLC10A5Q5PT55 438 aa17■□□□□ 0.31
LINC01879-202ENST00000616078 JDP2Q8WYK2 163 aa17■□□□□ 0.31
LINC01879-202ENST00000616078 RUNDC1Q96C34 613 aa17■□□□□ 0.31
LINC01879-202ENST00000616078 NLRP3Q96P20 1036 aa17■□□□□ 0.31
LINC01879-202ENST00000616078 UTP14AQ9BVJ6 771 aaKnown RBP17■□□□□ 0.31
LINC01879-202ENST00000616078 HACL1Q9UJ83 578 aa17■□□□□ 0.31
LINC01879-202ENST00000616078 WDR43Q15061 677 aaKnown RBP eCLIP16.99■□□□□ 0.31
LINC01879-202ENST00000616078 HSP90AB3PQ58FF7 597 aa16.99■□□□□ 0.31
LINC01879-202ENST00000616078 GPC2Q8N158 579 aa16.99■□□□□ 0.31
LINC01879-202ENST00000616078 ANXA1P04083 346 aa16.99■□□□□ 0.31
LINC01879-202ENST00000616078 CCDC146Q8IYE0 955 aa16.99■□□□□ 0.31
LINC01879-202ENST00000616078 DDX21Q9NR30 783 aaKnown RBP eCLIP16.99■□□□□ 0.31
LINC01879-202ENST00000616078 PASKQ96RG2 1323 aa16.99■□□□□ 0.31
LINC01879-202ENST00000616078 PPEF1O14829 653 aaPredicted RBP16.98■□□□□ 0.31
LINC01879-202ENST00000616078 NEUROD2Q15784 382 aa16.98■□□□□ 0.31
LINC01879-202ENST00000616078 C3orf67Q6ZVT6 689 aa16.98■□□□□ 0.31
LINC01879-202ENST00000616078 COPS6Q7L5N1 327 aa16.98■□□□□ 0.31
LINC01879-202ENST00000616078 PNMA8AQ86V59 439 aaPredicted RBP16.98■□□□□ 0.31
LINC01879-202ENST00000616078 TRIM35Q9UPQ4 493 aa16.98■□□□□ 0.31
LINC01879-202ENST00000616078 ANKRD36CQ5JPF3 1778 aa16.97■□□□□ 0.31
LINC01879-202ENST00000616078 HOXB7P09629 217 aa16.97■□□□□ 0.31
LINC01879-202ENST00000616078 EPHX2P34913 555 aa16.97■□□□□ 0.31
LINC01879-202ENST00000616078 XAGE3Q8WTP9 111 aa16.97■□□□□ 0.31
LINC01879-202ENST00000616078 ADAMTSL1Q8N6G6 1762 aa16.96■□□□□ 0.31
LINC01879-202ENST00000616078 ZNF316A6NFI3 1004 aaPredicted RBP16.96■□□□□ 0.31
LINC01879-202ENST00000616078 EIF6P56537 245 aaKnown RBP16.96■□□□□ 0.31
LINC01879-202ENST00000616078 TCIRG1Q13488 830 aa16.96■□□□□ 0.31
LINC01879-202ENST00000616078 EAPPQ56P03 285 aaPredicted RBP16.96■□□□□ 0.31
LINC01879-202ENST00000616078 TMX4Q9H1E5 349 aaPredicted RBP16.96■□□□□ 0.31
LINC01879-202ENST00000616078 VPS33BQ9H267 617 aa16.96■□□□□ 0.31
LINC01879-202ENST00000616078 ITGBL1O95965 494 aaPredicted RBP16.95■□□□□ 0.3
LINC01879-202ENST00000616078 AIMP1Q12904 312 aaKnown RBP16.95■□□□□ 0.3
LINC01879-202ENST00000616078 NLRP10Q86W26 655 aa16.95■□□□□ 0.3
LINC01879-202ENST00000616078 LARGE2Q8N3Y3 721 aa16.95■□□□□ 0.3
LINC01879-202ENST00000616078 NECTIN2Q92692 538 aa16.95■□□□□ 0.3
LINC01879-202ENST00000616078 ADAMTS8Q9UP79 889 aa16.95■□□□□ 0.3
LINC01879-202ENST00000616078 ATP6V0A2Q9Y487 856 aa16.95■□□□□ 0.3
LINC01879-202ENST00000616078 COL4A5P29400 1685 aa16.95■□□□□ 0.3
LINC01879-202ENST00000616078 ABCC4O15439 1325 aa16.94■□□□□ 0.3
LINC01879-202ENST00000616078 HSPA1AP0DMV8 641 aaKnown RBP16.94■□□□□ 0.3
LINC01879-202ENST00000616078 HSPA1BP0DMV9 641 aaKnown RBP16.94■□□□□ 0.3
LINC01879-202ENST00000616078 KRT24Q2M2I5 525 aa16.94■□□□□ 0.3
LINC01879-202ENST00000616078 COL13A1Q5TAT6 717 aaPredicted RBP16.94■□□□□ 0.3
LINC01879-202ENST00000616078 LAS1LQ9Y4W2 734 aaKnown RBP16.94■□□□□ 0.3
LINC01879-202ENST00000616078 BBOX1O75936 387 aa16.93■□□□□ 0.3
LINC01879-202ENST00000616078 HDGFL1Q5TGJ6 251 aa16.93■□□□□ 0.3
LINC01879-202ENST00000616078 CFAP44Q96MT7 982 aa16.93■□□□□ 0.3
LINC01879-202ENST00000616078 CHPF2Q9P2E5 772 aa16.93■□□□□ 0.3
LINC01879-202ENST00000616078 CLEC11AQ9Y240 323 aa16.93■□□□□ 0.3
LINC01879-202ENST00000616078 CNTNAP1P78357 1384 aa16.93■□□□□ 0.3
LINC01879-202ENST00000616078 SH3TC1Q8TE82 1336 aa16.93■□□□□ 0.3
LINC01879-202ENST00000616078 TMEM88BA6NKF7 163 aa16.93■□□□□ 0.3
LINC01879-202ENST00000616078 TCERG1O14776 1098 aaKnown RBP16.93■□□□□ 0.3
LINC01879-202ENST00000616078 NIM1KQ8IY84 436 aa16.93■□□□□ 0.3
LINC01879-202ENST00000616078 SUPT20HQ8NEM7 779 aa16.93■□□□□ 0.3
LINC01879-202ENST00000616078 RTFDC1Q9BY42 306 aaPredicted RBP16.93■□□□□ 0.3
LINC01879-202ENST00000616078 PRKRIP1Q9H875 184 aaPredicted RBP16.93■□□□□ 0.3
LINC01879-202ENST00000616078 DBF4Q9UBU7 674 aaPredicted RBP16.93■□□□□ 0.3
LINC01879-202ENST00000616078 TRMT112Q9UI30 125 aaKnown RBP16.93■□□□□ 0.3
LINC01879-202ENST00000616078 LMOD1P29536 600 aaPredicted RBP16.92■□□□□ 0.3
LINC01879-202ENST00000616078 PLBD2Q8NHP8 589 aa16.92■□□□□ 0.3
LINC01879-202ENST00000616078 MKRN1Q9UHC7 482 aaKnown RBP16.92■□□□□ 0.3
LINC01879-202ENST00000616078 GJA3Q9Y6H8 435 aa16.92■□□□□ 0.3
LINC01879-202ENST00000616078 LAMB2P55268 1798 aa16.91■□□□□ 0.3
LINC01879-202ENST00000616078 PPIP5K2O43314 1243 aa16.91■□□□□ 0.3
LINC01879-202ENST00000616078 HCLS1P14317 486 aaPredicted RBP16.91■□□□□ 0.3
LINC01879-202ENST00000616078 SCNN1DP51172 638 aa16.91■□□□□ 0.3
LINC01879-202ENST00000616078 SLC51AQ86UW1 340 aa16.91■□□□□ 0.3
LINC01879-202ENST00000616078 SP8Q8IXZ3 490 aa16.91■□□□□ 0.3
LINC01879-202ENST00000616078 CNTROBQ8N137 903 aa16.91■□□□□ 0.3
LINC01879-202ENST00000616078 MAP1SQ66K74 1059 aaPredicted RBP16.9■□□□□ 0.3
LINC01879-202ENST00000616078 ANKRD13DQ6ZTN6 518 aa16.9■□□□□ 0.3
LINC01879-202ENST00000616078 DDX46Q7L014 1031 aaKnown RBP16.9■□□□□ 0.3
LINC01879-202ENST00000616078 HYPKQ9NX55 129 aa16.9■□□□□ 0.3
LINC01879-202ENST00000616078 LTBP1Q14766 1721 aa16.89■□□□□ 0.29
LINC01879-202ENST00000616078 GRAPQ13588 217 aa16.89■□□□□ 0.29
LINC01879-202ENST00000616078 AOC3Q16853 763 aa16.89■□□□□ 0.29
LINC01879-202ENST00000616078 DPP8Q6V1X1 898 aaPredicted RBP16.89■□□□□ 0.29
LINC01879-202ENST00000616078 TMC4Q7Z404 712 aa16.89■□□□□ 0.29
LINC01879-202ENST00000616078 GRAPLQ8TC17 118 aaPredicted RBP16.89■□□□□ 0.29
LINC01879-202ENST00000616078 ZNF853P0CG23 659 aa16.88■□□□□ 0.29
LINC01879-202ENST00000616078 DUSP27Q5VZP5 1158 aa16.88■□□□□ 0.29
LINC01879-202ENST00000616078 USP50Q70EL3 339 aaPredicted RBP16.88■□□□□ 0.29
LINC01879-202ENST00000616078 MPNDQ8N594 471 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms