RNA–Protein interactions for RNA: ENST00000614240.4

SMN2-213, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-213ENST00000614240 FZD9O00144 591 aa23.47■■□□□ 1.35
SMN2-213ENST00000614240 GIGYF2Q6Y7W6 1299 aaKnown RBP23.47■■□□□ 1.35
SMN2-213ENST00000614240 ZNF34Q8IZ26 560 aa23.47■■□□□ 1.35
SMN2-213ENST00000614240 UBN2Q6ZU65 1347 aa23.47■■□□□ 1.35
SMN2-213ENST00000614240 TCERG1O14776 1098 aaKnown RBP23.46■■□□□ 1.35
SMN2-213ENST00000614240 HOXA10P31260 410 aaPredicted RBP23.46■■□□□ 1.35
SMN2-213ENST00000614240 EIF6P56537 245 aaKnown RBP23.46■■□□□ 1.35
SMN2-213ENST00000614240 RNF123Q5XPI4 1314 aa23.46■■□□□ 1.35
SMN2-213ENST00000614240 PNMA8AQ86V59 439 aaPredicted RBP23.46■■□□□ 1.35
SMN2-213ENST00000614240 GPC2Q8N158 579 aa23.46■■□□□ 1.35
SMN2-213ENST00000614240 TMX4Q9H1E5 349 aaPredicted RBP23.46■■□□□ 1.35
SMN2-213ENST00000614240 IBTKQ9P2D0 1353 aaPredicted RBP23.46■■□□□ 1.35
SMN2-213ENST00000614240 PASKQ96RG2 1323 aa23.45■■□□□ 1.34
SMN2-213ENST00000614240 GRIPAP1Q4V328 841 aa23.45■■□□□ 1.34
SMN2-213ENST00000614240 PARP10Q53GL7 1025 aa23.45■■□□□ 1.34
SMN2-213ENST00000614240 GJA3Q9Y6H8 435 aa23.45■■□□□ 1.34
SMN2-213ENST00000614240 TMEM88BA6NKF7 163 aa23.44■■□□□ 1.34
SMN2-213ENST00000614240 PPEF1O14829 653 aaPredicted RBP23.44■■□□□ 1.34
SMN2-213ENST00000614240 LMOD3Q0VAK6 560 aa23.44■■□□□ 1.34
SMN2-213ENST00000614240 RALBP1Q15311 655 aa23.44■■□□□ 1.34
SMN2-213ENST00000614240 LARGE2Q8N3Y3 721 aa23.44■■□□□ 1.34
SMN2-213ENST00000614240 NLRP3Q96P20 1036 aa23.44■■□□□ 1.34
SMN2-213ENST00000614240 CRAMP1Q96RY5 1269 aa23.44■■□□□ 1.34
SMN2-213ENST00000614240 SCN4AP35499 1836 aa23.44■■□□□ 1.34
SMN2-213ENST00000614240 NTSR2O95665 410 aa23.43■■□□□ 1.34
SMN2-213ENST00000614240 UTP14AQ9BVJ6 771 aaKnown RBP23.43■■□□□ 1.34
SMN2-213ENST00000614240 NUP98P52948 1817 aa23.43■■□□□ 1.34
SMN2-213ENST00000614240 ITGBL1O95965 494 aaPredicted RBP23.42■■□□□ 1.34
SMN2-213ENST00000614240 LMOD1P29536 600 aaPredicted RBP23.42■■□□□ 1.34
SMN2-213ENST00000614240 RIC1Q4ADV7 1423 aa23.42■■□□□ 1.34
SMN2-213ENST00000614240 MAP1SQ66K74 1059 aaPredicted RBP23.41■■□□□ 1.34
SMN2-213ENST00000614240 CNTROBQ8N137 903 aa23.41■■□□□ 1.34
SMN2-213ENST00000614240 NECTIN2Q92692 538 aa23.41■■□□□ 1.34
SMN2-213ENST00000614240 BABAM1Q9NWV8 329 aa23.41■■□□□ 1.34
SMN2-213ENST00000614240 CNTNAP1P78357 1384 aa23.4■■□□□ 1.34
SMN2-213ENST00000614240 ANXA1P04083 346 aa23.4■■□□□ 1.34
SMN2-213ENST00000614240 TMPOP42166 694 aaKnown RBP23.4■■□□□ 1.34
SMN2-213ENST00000614240 AIMP1Q12904 312 aaKnown RBP23.4■■□□□ 1.34
SMN2-213ENST00000614240 PDIA6Q15084 440 aa23.4■■□□□ 1.34
SMN2-213ENST00000614240 NEUROD2Q15784 382 aa23.39■■□□□ 1.33
SMN2-213ENST00000614240 PROSER3Q2NL68 480 aa23.39■■□□□ 1.33
SMN2-213ENST00000614240 C3orf67Q6ZVT6 689 aa23.39■■□□□ 1.33
SMN2-213ENST00000614240 NIM1KQ8IY84 436 aa23.39■■□□□ 1.33
SMN2-213ENST00000614240 SNED1Q8TER0 1413 aa23.38■■□□□ 1.33
SMN2-213ENST00000614240 PPIP5K2O43314 1243 aa23.37■■□□□ 1.33
SMN2-213ENST00000614240 VEGFBP49765 207 aa23.37■■□□□ 1.33
SMN2-213ENST00000614240 HSP90AB3PQ58FF7 597 aa23.37■■□□□ 1.33
SMN2-213ENST00000614240 COPS6Q7L5N1 327 aa23.37■■□□□ 1.33
SMN2-213ENST00000614240 LRP10Q7Z4F1 713 aa23.37■■□□□ 1.33
SMN2-213ENST00000614240 AIDAQ96BJ3 306 aa23.37■■□□□ 1.33
SMN2-213ENST00000614240 LAS1LQ9Y4W2 734 aaKnown RBP23.37■■□□□ 1.33
SMN2-213ENST00000614240 SLC10A5Q5PT55 438 aa23.36■■□□□ 1.33
SMN2-213ENST00000614240 CCDC146Q8IYE0 955 aa23.36■■□□□ 1.33
SMN2-213ENST00000614240 XAGE3Q8WTP9 111 aa23.36■■□□□ 1.33
SMN2-213ENST00000614240 ATP6V0A2Q9Y487 856 aa23.36■■□□□ 1.33
SMN2-213ENST00000614240 SLC51AQ86UW1 340 aa23.35■■□□□ 1.33
SMN2-213ENST00000614240 SUPT20HQ8NEM7 779 aa23.35■■□□□ 1.33
SMN2-213ENST00000614240 ABT1Q9ULW3 272 aaKnown RBP23.35■■□□□ 1.33
SMN2-213ENST00000614240 EPS15P42566 896 aa23.34■■□□□ 1.33
SMN2-213ENST00000614240 AOC3Q16853 763 aa23.34■■□□□ 1.33
SMN2-213ENST00000614240 DEFB115Q30KQ5 88 aa23.34■■□□□ 1.33
SMN2-213ENST00000614240 ABCC4O15439 1325 aa23.33■■□□□ 1.33
SMN2-213ENST00000614240 FOXN1O15353 648 aa23.33■■□□□ 1.33
SMN2-213ENST00000614240 HCLS1P14317 486 aaPredicted RBP23.33■■□□□ 1.33
SMN2-213ENST00000614240 DDX10Q13206 875 aaKnown RBP23.33■■□□□ 1.33
SMN2-213ENST00000614240 WDR43Q15061 677 aaKnown RBP eCLIP23.33■■□□□ 1.33
SMN2-213ENST00000614240 TRMT112Q9UI30 125 aaKnown RBP23.33■■□□□ 1.33
SMN2-213ENST00000614240 COL4A5P29400 1685 aa23.32■■□□□ 1.32
SMN2-213ENST00000614240 BBOX1O75936 387 aa23.32■■□□□ 1.32
SMN2-213ENST00000614240 TCIRG1Q13488 830 aa23.32■■□□□ 1.32
SMN2-213ENST00000614240 DDX46Q7L014 1031 aaKnown RBP23.32■■□□□ 1.32
SMN2-213ENST00000614240 NLRP10Q86W26 655 aa23.32■■□□□ 1.32
SMN2-213ENST00000614240 VPS33BQ9H267 617 aa23.32■■□□□ 1.32
SMN2-213ENST00000614240 DDX21Q9NR30 783 aaKnown RBP eCLIP23.32■■□□□ 1.32
SMN2-213ENST00000614240 MYBBP1AQ9BQG0 1328 aaKnown RBP23.32■■□□□ 1.32
SMN2-213ENST00000614240 SCNN1DP51172 638 aa23.31■■□□□ 1.32
SMN2-213ENST00000614240 DPP8Q6V1X1 898 aaPredicted RBP23.31■■□□□ 1.32
SMN2-213ENST00000614240 CHL1O00533 1208 aa23.3■■□□□ 1.32
SMN2-213ENST00000614240 CTCFP49711 727 aaPredicted RBP23.3■■□□□ 1.32
SMN2-213ENST00000614240 KRT24Q2M2I5 525 aa23.3■■□□□ 1.32
SMN2-213ENST00000614240 USP50Q70EL3 339 aaPredicted RBP23.3■■□□□ 1.32
SMN2-213ENST00000614240 SP8Q8IXZ3 490 aa23.3■■□□□ 1.32
SMN2-213ENST00000614240 MPNDQ8N594 471 aa23.3■■□□□ 1.32
SMN2-213ENST00000614240 RUNDC1Q96C34 613 aa23.3■■□□□ 1.32
SMN2-213ENST00000614240 ZNRF3Q9ULT6 936 aa23.3■■□□□ 1.32
SMN2-213ENST00000614240 SH3TC1Q8TE82 1336 aa23.3■■□□□ 1.32
SMN2-213ENST00000614240 ADAMTSL1Q8N6G6 1762 aa23.29■■□□□ 1.32
SMN2-213ENST00000614240 RASSF10A6NK89 507 aa23.29■■□□□ 1.32
SMN2-213ENST00000614240 HDGFL1Q5TGJ6 251 aa23.28■■□□□ 1.32
SMN2-213ENST00000614240 PAXIP1Q6ZW49 1069 aaPredicted RBP23.28■■□□□ 1.32
SMN2-213ENST00000614240 ZNF428Q96B54 188 aa23.28■■□□□ 1.32
SMN2-213ENST00000614240 CHPF2Q9P2E5 772 aa23.28■■□□□ 1.32
SMN2-213ENST00000614240 CXCL9Q07325 125 aa23.27■■□□□ 1.32
SMN2-213ENST00000614240 RTFDC1Q9BY42 306 aaPredicted RBP23.27■■□□□ 1.32
SMN2-213ENST00000614240 PRDM10Q9NQV6 1147 aa23.27■■□□□ 1.32
SMN2-213ENST00000614240 ADARB2Q9NS39 739 aaKnown RBP23.27■■□□□ 1.32
SMN2-213ENST00000614240 GRAPQ13588 217 aa23.26■■□□□ 1.31
SMN2-213ENST00000614240 GRAPLQ8TC17 118 aaPredicted RBP23.26■■□□□ 1.31
SMN2-213ENST00000614240 WBP1LQ9NX94 342 aa23.26■■□□□ 1.31
SMN2-213ENST00000614240 GPRC5DQ9NZD1 345 aa23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms