RNA–Protein interactions for RNA: ENST00000608623.1

LINC01278-202, Transcript of long intergenic non-protein coding RNA 1278, humanhuman

Gene LINC01278, Length 5,053 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01278-202ENST00000608623 PNPLA6Q8IY17 1366 aa4.43□□□□□ -1.7
LINC01278-202ENST00000608623 ROBO2Q9HCK4 1378 aa4.43□□□□□ -1.7
LINC01278-202ENST00000608623 PLEKHG3A1L390 1219 aa4.42□□□□□ -1.7
LINC01278-202ENST00000608623 GOLGA6L4A6NEF3 574 aa4.42□□□□□ -1.7
LINC01278-202ENST00000608623 LDHBP07195 334 aaKnown RBP4.42□□□□□ -1.7
LINC01278-202ENST00000608623 RGS3P49796 1198 aa4.42□□□□□ -1.7
LINC01278-202ENST00000608623 MFAP1P55081 439 aaKnown RBP4.42□□□□□ -1.7
LINC01278-202ENST00000608623 TTLL5Q6EMB2 1281 aa4.42□□□□□ -1.7
LINC01278-202ENST00000608623 TRMT1LQ7Z2T5 733 aaKnown RBP4.42□□□□□ -1.7
LINC01278-202ENST00000608623 ZFYVE28Q9HCC9 887 aa4.42□□□□□ -1.7
LINC01278-202ENST00000608623 ABCC11Q96J66 1382 aa4.42□□□□□ -1.7
LINC01278-202ENST00000608623 ZBTB24O43167 697 aaPredicted RBP4.42□□□□□ -1.7
LINC01278-202ENST00000608623 RAB3GAP1Q15042 981 aa4.42□□□□□ -1.7
LINC01278-202ENST00000608623 PPP4R3AQ6IN85 833 aa4.42□□□□□ -1.7
LINC01278-202ENST00000608623 CHADLQ6NUI6 762 aa4.42□□□□□ -1.7
LINC01278-202ENST00000608623 ARHGEF25Q86VW2 580 aa4.42□□□□□ -1.7
LINC01278-202ENST00000608623 ARHGEF1Q92888 912 aaKnown RBP4.42□□□□□ -1.7
LINC01278-202ENST00000608623 CUL5Q93034 780 aa4.42□□□□□ -1.7
LINC01278-202ENST00000608623 SH2D4AQ9H788 454 aa4.42□□□□□ -1.7
LINC01278-202ENST00000608623 TRIM17Q9Y577 477 aa4.42□□□□□ -1.7
LINC01278-202ENST00000608623 TCOF1Q13428 1488 aaKnown RBP4.42□□□□□ -1.7
LINC01278-202ENST00000608623 ARHGEF12Q9NZN5 1544 aa4.42□□□□□ -1.7
LINC01278-202ENST00000608623 SPATA31D1Q6ZQQ2 1576 aa4.42□□□□□ -1.7
LINC01278-202ENST00000608623 RNF17Q9BXT8 1623 aaKnown RBP4.42□□□□□ -1.7
LINC01278-202ENST00000608623 PLEKHH1Q9ULM0 1364 aa4.42□□□□□ -1.7
LINC01278-202ENST00000608623 MATR3P43243 847 aaKnown RBP eCLIP4.42□□□□□ -1.7
LINC01278-202ENST00000608623 RPS8P62241 208 aaKnown RBP4.42□□□□□ -1.7
LINC01278-202ENST00000608623 TRIM29Q14134 588 aa4.42□□□□□ -1.7
LINC01278-202ENST00000608623 EIF4A2Q14240 407 aaKnown RBP4.42□□□□□ -1.7
LINC01278-202ENST00000608623 CCDC102AQ96A19 550 aa4.42□□□□□ -1.7
LINC01278-202ENST00000608623 FAM89AQ96GI7 184 aa4.42□□□□□ -1.7
LINC01278-202ENST00000608623 TSKSQ9UJT2 592 aa4.42□□□□□ -1.7
LINC01278-202ENST00000608623 PDE4CQ08493 712 aa4.42□□□□□ -1.7
LINC01278-202ENST00000608623 GRIPAP1Q4V328 841 aa4.42□□□□□ -1.7
LINC01278-202ENST00000608623 ZNF790Q6PG37 636 aa4.42□□□□□ -1.7
LINC01278-202ENST00000608623 ERC1Q8IUD2 1116 aa4.42□□□□□ -1.7
LINC01278-202ENST00000608623 SLC52A2Q9HAB3 445 aa4.42□□□□□ -1.7
LINC01278-202ENST00000608623 C1orf167Q5SNV9 1468 aa4.41□□□□□ -1.7
LINC01278-202ENST00000608623 KDM4AO75164 1064 aa4.41□□□□□ -1.7
LINC01278-202ENST00000608623 NOP2P46087 812 aaKnown RBP4.41□□□□□ -1.7
LINC01278-202ENST00000608623 BCAMP50895 628 aa4.41□□□□□ -1.7
LINC01278-202ENST00000608623 L1TD1Q5T7N2 865 aaKnown RBP4.41□□□□□ -1.7
LINC01278-202ENST00000608623 FNBP4Q8N3X1 1017 aaPredicted RBP4.41□□□□□ -1.7
LINC01278-202ENST00000608623 RUFY2Q8WXA3 655 aa4.41□□□□□ -1.7
LINC01278-202ENST00000608623 CCDC34Q96HJ3 373 aa4.41□□□□□ -1.7
LINC01278-202ENST00000608623 HTATIP2Q9BUP3 242 aa4.41□□□□□ -1.7
LINC01278-202ENST00000608623 TTF2Q9UNY4 1162 aaKnown RBP4.41□□□□□ -1.7
LINC01278-202ENST00000608623 MAP3K2Q9Y2U5 619 aa4.41□□□□□ -1.7
LINC01278-202ENST00000608623 PTCH1Q13635 1447 aa4.41□□□□□ -1.7
LINC01278-202ENST00000608623 MYBBP1AQ9BQG0 1328 aaKnown RBP4.41□□□□□ -1.7
LINC01278-202ENST00000608623 TMEM88BA6NKF7 163 aa4.41□□□□□ -1.7
LINC01278-202ENST00000608623 TNPO2O14787 897 aaKnown RBP4.41□□□□□ -1.7
LINC01278-202ENST00000608623 BBOX1O75936 387 aa4.41□□□□□ -1.7
LINC01278-202ENST00000608623 USP17L8P0C7I0 530 aa4.41□□□□□ -1.7
LINC01278-202ENST00000608623 PLCG2P16885 1265 aa4.41□□□□□ -1.7
LINC01278-202ENST00000608623 ATP2B4P23634 1241 aa4.41□□□□□ -1.7
LINC01278-202ENST00000608623 IARSP41252 1262 aaKnown RBP4.41□□□□□ -1.7
LINC01278-202ENST00000608623 SLC9C1Q4G0N8 1177 aa4.41□□□□□ -1.7
LINC01278-202ENST00000608623 ZKSCAN2Q63HK3 967 aa4.41□□□□□ -1.7
LINC01278-202ENST00000608623 DHX37Q8IY37 1157 aaKnown RBP4.41□□□□□ -1.7
LINC01278-202ENST00000608623 NINLQ9Y2I6 1382 aa4.41□□□□□ -1.7
LINC01278-202ENST00000608623 PHKG2P15735 406 aa4.41□□□□□ -1.7
LINC01278-202ENST00000608623 HIBADHP31937 336 aaKnown RBP4.41□□□□□ -1.7
LINC01278-202ENST00000608623 TAF12Q16514 161 aa4.41□□□□□ -1.7
LINC01278-202ENST00000608623 TMC4Q7Z404 712 aa4.41□□□□□ -1.7
LINC01278-202ENST00000608623 AEBP1Q8IUX7 1158 aa4.41□□□□□ -1.7
LINC01278-202ENST00000608623 CNTROBQ8N137 903 aa4.41□□□□□ -1.7
LINC01278-202ENST00000608623 MARCH10Q8NA82 808 aaPredicted RBP4.41□□□□□ -1.7
LINC01278-202ENST00000608623 PNMA3Q9UL41 463 aa4.41□□□□□ -1.7
LINC01278-202ENST00000608623 ZBTB1Q9Y2K1 713 aa4.41□□□□□ -1.7
LINC01278-202ENST00000608623 CRB1P82279 1406 aa4.41□□□□□ -1.7
LINC01278-202ENST00000608623 SCNN1DP51172 638 aa4.41□□□□□ -1.7
LINC01278-202ENST00000608623 COL23A1Q86Y22 540 aaPredicted RBP4.41□□□□□ -1.7
LINC01278-202ENST00000608623 PIGBQ92521 554 aa4.41□□□□□ -1.7
LINC01278-202ENST00000608623 EFCC1Q9HA90 598 aa4.41□□□□□ -1.7
LINC01278-202ENST00000608623 CIZ1Q9ULV3 898 aaPredicted RBP4.41□□□□□ -1.7
LINC01278-202ENST00000608623 ITSN2Q9NZM3 1697 aa4.41□□□□□ -1.7
LINC01278-202ENST00000608623 SBNO1A3KN83 1393 aa4.41□□□□□ -1.7
LINC01278-202ENST00000608623 SRGAP3O43295 1099 aa4.4□□□□□ -1.7
LINC01278-202ENST00000608623 DDNO94850 711 aaPredicted RBP4.4□□□□□ -1.7
LINC01278-202ENST00000608623 RASSF7Q02833 373 aa4.4□□□□□ -1.7
LINC01278-202ENST00000608623 MVPQ14764 893 aaKnown RBP4.4□□□□□ -1.7
LINC01278-202ENST00000608623 AOC3Q16853 763 aa4.4□□□□□ -1.7
LINC01278-202ENST00000608623 PRPF40BQ6NWY9 871 aaKnown RBP4.4□□□□□ -1.7
LINC01278-202ENST00000608623 CKAP2LQ8IYA6 745 aa4.4□□□□□ -1.7
LINC01278-202ENST00000608623 MICAL1Q8TDZ2 1067 aa4.4□□□□□ -1.7
LINC01278-202ENST00000608623 PIBF1Q8WXW3 757 aa4.4□□□□□ -1.7
LINC01278-202ENST00000608623 TEKT1Q969V4 418 aa4.4□□□□□ -1.7
LINC01278-202ENST00000608623 FTOQ9C0B1 505 aaKnown RBP eCLIP4.4□□□□□ -1.7
LINC01278-202ENST00000608623 TIAM1Q13009 1591 aa4.4□□□□□ -1.7
LINC01278-202ENST00000608623 SOS2Q07890 1332 aaPredicted RBP4.4□□□□□ -1.7
LINC01278-202ENST00000608623 RNF123Q5XPI4 1314 aa4.4□□□□□ -1.7
LINC01278-202ENST00000608623 SETD1BQ9UPS6 1966 aaKnown RBP4.4□□□□□ -1.7
LINC01278-202ENST00000608623 KIF4BQ2VIQ3 1234 aa4.4□□□□□ -1.7
LINC01278-202ENST00000608623 CREBRFQ8IUR6 639 aa4.4□□□□□ -1.7
LINC01278-202ENST00000608623 DNAAF4Q8WXU2 420 aa4.4□□□□□ -1.7
LINC01278-202ENST00000608623 UBAC1Q9BSL1 405 aa4.4□□□□□ -1.7
LINC01278-202ENST00000608623 RWDD1Q9H446 243 aaPredicted RBP4.4□□□□□ -1.7
LINC01278-202ENST00000608623 GBA2Q9HCG7 927 aaPredicted RBP4.4□□□□□ -1.7
LINC01278-202ENST00000608623 CNOT7Q9UIV1 285 aaKnown RBP4.4□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms