RNA–Protein interactions for RNA: ENST00000606602.1

SNX5-219, Transcript of sorting nexin 5, humanhuman

TSL 1 (best) BASIC

Gene SNX5, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-219ENST00000606602 RIC1Q4ADV7 1423 aa31.89■■■□□ 2.7
SNX5-219ENST00000606602 ANXA1P04083 346 aa31.88■■■□□ 2.69
SNX5-219ENST00000606602 PROSER3Q2NL68 480 aa31.88■■■□□ 2.69
SNX5-219ENST00000606602 PARP10Q53GL7 1025 aa31.88■■■□□ 2.69
SNX5-219ENST00000606602 CC2D2BQ6DHV5 1058 aa31.87■■■□□ 2.69
SNX5-219ENST00000606602 NECTIN2Q92692 538 aa31.87■■■□□ 2.69
SNX5-219ENST00000606602 PSMD1Q99460 953 aa31.87■■■□□ 2.69
SNX5-219ENST00000606602 TAF1DQ9H5J8 278 aaPredicted RBP31.87■■■□□ 2.69
SNX5-219ENST00000606602 WDR43Q15061 677 aaKnown RBP eCLIP31.86■■■□□ 2.69
SNX5-219ENST00000606602 RBM17Q96I25 401 aaKnown RBP31.86■■■□□ 2.69
SNX5-219ENST00000606602 FZD9O00144 591 aa31.84■■■□□ 2.69
SNX5-219ENST00000606602 C3orf67Q6ZVT6 689 aa31.84■■■□□ 2.69
SNX5-219ENST00000606602 LDHDQ86WU2 507 aa31.84■■■□□ 2.69
SNX5-219ENST00000606602 RUNDC1Q96C34 613 aa31.84■■■□□ 2.69
SNX5-219ENST00000606602 CRAMP1Q96RY5 1269 aa31.84■■■□□ 2.69
SNX5-219ENST00000606602 SNED1Q8TER0 1413 aa31.83■■■□□ 2.69
SNX5-219ENST00000606602 JDP2Q8WYK2 163 aa31.83■■■□□ 2.69
SNX5-219ENST00000606602 NLRP3Q96P20 1036 aa31.83■■■□□ 2.69
SNX5-219ENST00000606602 UTP14AQ9BVJ6 771 aaKnown RBP31.83■■■□□ 2.69
SNX5-219ENST00000606602 LAS1LQ9Y4W2 734 aaKnown RBP31.83■■■□□ 2.69
SNX5-219ENST00000606602 TCERG1O14776 1098 aaKnown RBP31.82■■■□□ 2.68
SNX5-219ENST00000606602 AIMP1Q12904 312 aaKnown RBP31.82■■■□□ 2.68
SNX5-219ENST00000606602 COPS6Q7L5N1 327 aa31.82■■■□□ 2.68
SNX5-219ENST00000606602 HACL1Q9UJ83 578 aa31.82■■■□□ 2.68
SNX5-219ENST00000606602 CHL1O00533 1208 aa31.81■■■□□ 2.68
SNX5-219ENST00000606602 PPEF1O14829 653 aaPredicted RBP31.81■■■□□ 2.68
SNX5-219ENST00000606602 GRIPAP1Q4V328 841 aa31.81■■■□□ 2.68
SNX5-219ENST00000606602 EAPPQ56P03 285 aaPredicted RBP31.81■■■□□ 2.68
SNX5-219ENST00000606602 XAGE3Q8WTP9 111 aa31.81■■■□□ 2.68
SNX5-219ENST00000606602 KRT24Q2M2I5 525 aa31.8■■■□□ 2.68
SNX5-219ENST00000606602 CREBZFQ9NS37 354 aa31.8■■■□□ 2.68
SNX5-219ENST00000606602 TRIM35Q9UPQ4 493 aa31.8■■■□□ 2.68
SNX5-219ENST00000606602 HSP90AB3PQ58FF7 597 aa31.79■■■□□ 2.68
SNX5-219ENST00000606602 SLC10A5Q5PT55 438 aa31.79■■■□□ 2.68
SNX5-219ENST00000606602 EPHX2P34913 555 aa31.78■■■□□ 2.68
SNX5-219ENST00000606602 SLC51AQ86UW1 340 aa31.78■■■□□ 2.68
SNX5-219ENST00000606602 GPC2Q8N158 579 aa31.78■■■□□ 2.68
SNX5-219ENST00000606602 DDX21Q9NR30 783 aaKnown RBP eCLIP31.78■■■□□ 2.68
SNX5-219ENST00000606602 ADAMTS8Q9UP79 889 aa31.78■■■□□ 2.68
SNX5-219ENST00000606602 RNF123Q5XPI4 1314 aa31.77■■■□□ 2.68
SNX5-219ENST00000606602 CLEC11AQ9Y240 323 aa31.77■■■□□ 2.68
SNX5-219ENST00000606602 PCNTO95613 3336 aa31.77■■■□□ 2.68
SNX5-219ENST00000606602 SCN4AP35499 1836 aa31.77■■■□□ 2.68
SNX5-219ENST00000606602 EIF6P56537 245 aaKnown RBP31.76■■■□□ 2.67
SNX5-219ENST00000606602 NLRP10Q86W26 655 aa31.76■■■□□ 2.67
SNX5-219ENST00000606602 LARGE2Q8N3Y3 721 aa31.76■■■□□ 2.67
SNX5-219ENST00000606602 TMX4Q9H1E5 349 aaPredicted RBP31.76■■■□□ 2.67
SNX5-219ENST00000606602 COL13A1Q5TAT6 717 aaPredicted RBP31.75■■■□□ 2.67
SNX5-219ENST00000606602 GJA3Q9Y6H8 435 aa31.75■■■□□ 2.67
SNX5-219ENST00000606602 TCIRG1Q13488 830 aa31.74■■■□□ 2.67
SNX5-219ENST00000606602 PNMA8AQ86V59 439 aaPredicted RBP31.74■■■□□ 2.67
SNX5-219ENST00000606602 MKRN1Q9UHC7 482 aaKnown RBP31.74■■■□□ 2.67
SNX5-219ENST00000606602 PASKQ96RG2 1323 aa31.74■■■□□ 2.67
SNX5-219ENST00000606602 HSPA1AP0DMV8 641 aaKnown RBP31.73■■■□□ 2.67
SNX5-219ENST00000606602 HSPA1BP0DMV9 641 aaKnown RBP31.73■■■□□ 2.67
SNX5-219ENST00000606602 CHPF2Q9P2E5 772 aa31.73■■■□□ 2.67
SNX5-219ENST00000606602 HCLS1P14317 486 aaPredicted RBP31.72■■■□□ 2.67
SNX5-219ENST00000606602 HDGFL1Q5TGJ6 251 aa31.72■■■□□ 2.67
SNX5-219ENST00000606602 TRMT112Q9UI30 125 aaKnown RBP31.72■■■□□ 2.67
SNX5-219ENST00000606602 ATP6V0A2Q9Y487 856 aa31.72■■■□□ 2.67
SNX5-219ENST00000606602 COL4A5P29400 1685 aa31.72■■■□□ 2.67
SNX5-219ENST00000606602 ABCC4O15439 1325 aa31.72■■■□□ 2.67
SNX5-219ENST00000606602 ITGBL1O95965 494 aaPredicted RBP31.71■■■□□ 2.67
SNX5-219ENST00000606602 PPIP5K2O43314 1243 aa31.69■■■□□ 2.66
SNX5-219ENST00000606602 NIM1KQ8IY84 436 aa31.69■■■□□ 2.66
SNX5-219ENST00000606602 PRKRIP1Q9H875 184 aaPredicted RBP31.69■■■□□ 2.66
SNX5-219ENST00000606602 SH3TC1Q8TE82 1336 aa31.69■■■□□ 2.66
SNX5-219ENST00000606602 HOXB7P09629 217 aa31.68■■■□□ 2.66
SNX5-219ENST00000606602 LMOD1P29536 600 aaPredicted RBP31.68■■■□□ 2.66
SNX5-219ENST00000606602 BBOX1O75936 387 aa31.67■■■□□ 2.66
SNX5-219ENST00000606602 MAP1SQ66K74 1059 aaPredicted RBP31.67■■■□□ 2.66
SNX5-219ENST00000606602 ZNF428Q96B54 188 aa31.67■■■□□ 2.66
SNX5-219ENST00000606602 CFAP44Q96MT7 982 aa31.67■■■□□ 2.66
SNX5-219ENST00000606602 DBF4Q9UBU7 674 aaPredicted RBP31.67■■■□□ 2.66
SNX5-219ENST00000606602 TMEM88BA6NKF7 163 aa31.66■■■□□ 2.66
SNX5-219ENST00000606602 AOC3Q16853 763 aa31.66■■■□□ 2.66
SNX5-219ENST00000606602 DDX46Q7L014 1031 aaKnown RBP31.66■■■□□ 2.66
SNX5-219ENST00000606602 CNTROBQ8N137 903 aa31.66■■■□□ 2.66
SNX5-219ENST00000606602 PLBD2Q8NHP8 589 aa31.66■■■□□ 2.66
SNX5-219ENST00000606602 ANKRD13DQ6ZTN6 518 aa31.65■■■□□ 2.66
SNX5-219ENST00000606602 SUPT20HQ8NEM7 779 aa31.65■■■□□ 2.66
SNX5-219ENST00000606602 VPS33BQ9H267 617 aa31.65■■■□□ 2.66
SNX5-219ENST00000606602 DUSP27Q5VZP5 1158 aa31.64■■■□□ 2.66
SNX5-219ENST00000606602 DPP8Q6V1X1 898 aaPredicted RBP31.64■■■□□ 2.66
SNX5-219ENST00000606602 SP8Q8IXZ3 490 aa31.64■■■□□ 2.66
SNX5-219ENST00000606602 CNTNAP1P78357 1384 aa31.64■■■□□ 2.66
SNX5-219ENST00000606602 SCNN1DP51172 638 aa31.63■■■□□ 2.65
SNX5-219ENST00000606602 MBIPQ9NS73 344 aa31.63■■■□□ 2.65
SNX5-219ENST00000606602 ANKRD36CQ5JPF3 1778 aa31.63■■■□□ 2.65
SNX5-219ENST00000606602 EPS15P42566 896 aa31.62■■■□□ 2.65
SNX5-219ENST00000606602 MPNDQ8N594 471 aa31.62■■■□□ 2.65
SNX5-219ENST00000606602 ADAMTSL1Q8N6G6 1762 aa31.62■■■□□ 2.65
SNX5-219ENST00000606602 RTFDC1Q9BY42 306 aaPredicted RBP31.62■■■□□ 2.65
SNX5-219ENST00000606602 HYPKQ9NX55 129 aa31.62■■■□□ 2.65
SNX5-219ENST00000606602 GRAPQ13588 217 aa31.61■■■□□ 2.65
SNX5-219ENST00000606602 TNS4Q8IZW8 715 aa31.61■■■□□ 2.65
SNX5-219ENST00000606602 GRAPLQ8TC17 118 aaPredicted RBP31.61■■■□□ 2.65
SNX5-219ENST00000606602 ISCA1Q9BUE6 129 aa31.6■■■□□ 2.65
SNX5-219ENST00000606602 ZNRF3Q9ULT6 936 aa31.6■■■□□ 2.65
SNX5-219ENST00000606602 ATP5J2-PTCD1G3V325 749 aa31.59■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms