RNA–Protein interactions for RNA: ENST00000600940.1

USP29-204, Transcript of ubiquitin specific peptidase 29, humanhuman

TSL 4

Gene USP29, Length 533 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP29-204ENST00000600940 RALBP1Q15311 655 aa18.21■□□□□ 0.51
USP29-204ENST00000600940 JDP2Q8WYK2 163 aa18.21■□□□□ 0.51
USP29-204ENST00000600940 TMX4Q9H1E5 349 aaPredicted RBP18.21■□□□□ 0.51
USP29-204ENST00000600940 TCERG1O14776 1098 aaKnown RBP18.2■□□□□ 0.5
USP29-204ENST00000600940 POTEIP0CG38 1075 aa18.2■□□□□ 0.5
USP29-204ENST00000600940 POTEJP0CG39 1038 aa18.2■□□□□ 0.5
USP29-204ENST00000600940 NEUROD2Q15784 382 aa18.2■□□□□ 0.5
USP29-204ENST00000600940 PPP1R42Q7Z4L9 355 aa18.2■□□□□ 0.5
USP29-204ENST00000600940 ABCC12Q96J65 1359 aa18.19■□□□□ 0.5
USP29-204ENST00000600940 SUSD4Q5VX71 490 aa18.19■□□□□ 0.5
USP29-204ENST00000600940 RBM17Q96I25 401 aaKnown RBP18.19■□□□□ 0.5
USP29-204ENST00000600940 ERBB4Q15303 1308 aa18.19■□□□□ 0.5
USP29-204ENST00000600940 CC2D2BQ6DHV5 1058 aa18.18■□□□□ 0.5
USP29-204ENST00000600940 GIGYF2Q6Y7W6 1299 aaKnown RBP18.18■□□□□ 0.5
USP29-204ENST00000600940 LDHDQ86WU2 507 aa18.18■□□□□ 0.5
USP29-204ENST00000600940 NECTIN2Q92692 538 aa18.18■□□□□ 0.5
USP29-204ENST00000600940 TAF1DQ9H5J8 278 aaPredicted RBP18.18■□□□□ 0.5
USP29-204ENST00000600940 HACL1Q9UJ83 578 aa18.18■□□□□ 0.5
USP29-204ENST00000600940 LAS1LQ9Y4W2 734 aaKnown RBP18.18■□□□□ 0.5
USP29-204ENST00000600940 ZNF541Q9H0D2 1346 aa18.18■□□□□ 0.5
USP29-204ENST00000600940 SCN4AP35499 1836 aa18.17■□□□□ 0.5
USP29-204ENST00000600940 DDX10Q13206 875 aaKnown RBP18.17■□□□□ 0.5
USP29-204ENST00000600940 CRY2Q49AN0 593 aa18.17■□□□□ 0.5
USP29-204ENST00000600940 L3MBTL3Q96JM7 780 aaPredicted RBP18.17■□□□□ 0.5
USP29-204ENST00000600940 CREBZFQ9NS37 354 aa18.17■□□□□ 0.5
USP29-204ENST00000600940 MKRN1Q9UHC7 482 aaKnown RBP18.17■□□□□ 0.5
USP29-204ENST00000600940 GJA3Q9Y6H8 435 aa18.17■□□□□ 0.5
USP29-204ENST00000600940 UBN2Q6ZU65 1347 aa18.17■□□□□ 0.5
USP29-204ENST00000600940 HSPA1AP0DMV8 641 aaKnown RBP18.16■□□□□ 0.5
USP29-204ENST00000600940 HSPA1BP0DMV9 641 aaKnown RBP18.16■□□□□ 0.5
USP29-204ENST00000600940 TMPOP42166 694 aaKnown RBP18.16■□□□□ 0.5
USP29-204ENST00000600940 EIF6P56537 245 aaKnown RBP18.16■□□□□ 0.5
USP29-204ENST00000600940 AIMP1Q12904 312 aaKnown RBP18.16■□□□□ 0.5
USP29-204ENST00000600940 WDR43Q15061 677 aaKnown RBP eCLIP18.16■□□□□ 0.5
USP29-204ENST00000600940 PARP10Q53GL7 1025 aa18.16■□□□□ 0.5
USP29-204ENST00000600940 COL13A1Q5TAT6 717 aaPredicted RBP18.16■□□□□ 0.5
USP29-204ENST00000600940 CCDC146Q8IYE0 955 aa18.16■□□□□ 0.5
USP29-204ENST00000600940 ZNF34Q8IZ26 560 aa18.16■□□□□ 0.5
USP29-204ENST00000600940 NLRP3Q96P20 1036 aa18.16■□□□□ 0.5
USP29-204ENST00000600940 PPEF1O14829 653 aaPredicted RBP18.15■□□□□ 0.5
USP29-204ENST00000600940 ANXA1P04083 346 aa18.15■□□□□ 0.5
USP29-204ENST00000600940 EPHX2P34913 555 aa18.15■□□□□ 0.5
USP29-204ENST00000600940 GRIPAP1Q4V328 841 aa18.15■□□□□ 0.5
USP29-204ENST00000600940 LARGE2Q8N3Y3 721 aa18.15■□□□□ 0.5
USP29-204ENST00000600940 PSMD1Q99460 953 aa18.15■□□□□ 0.5
USP29-204ENST00000600940 UTP14AQ9BVJ6 771 aaKnown RBP18.15■□□□□ 0.5
USP29-204ENST00000600940 RNF123Q5XPI4 1314 aa18.15■□□□□ 0.5
USP29-204ENST00000600940 IBTKQ9P2D0 1353 aaPredicted RBP18.15■□□□□ 0.5
USP29-204ENST00000600940 LMOD1P29536 600 aaPredicted RBP18.14■□□□□ 0.49
USP29-204ENST00000600940 PNMA8AQ86V59 439 aaPredicted RBP18.14■□□□□ 0.49
USP29-204ENST00000600940 TNS4Q8IZW8 715 aa18.14■□□□□ 0.49
USP29-204ENST00000600940 GPC2Q8N158 579 aa18.14■□□□□ 0.49
USP29-204ENST00000600940 BABAM1Q9NWV8 329 aa18.14■□□□□ 0.49
USP29-204ENST00000600940 FZD9O00144 591 aa18.13■□□□□ 0.49
USP29-204ENST00000600940 NTSR2O95665 410 aa18.13■□□□□ 0.49
USP29-204ENST00000600940 HOXA10P31260 410 aaPredicted RBP18.13■□□□□ 0.49
USP29-204ENST00000600940 CRAMP1Q96RY5 1269 aa18.13■□□□□ 0.49
USP29-204ENST00000600940 MYBBP1AQ9BQG0 1328 aaKnown RBP18.13■□□□□ 0.49
USP29-204ENST00000600940 PROSER3Q2NL68 480 aa18.12■□□□□ 0.49
USP29-204ENST00000600940 HSP90AB3PQ58FF7 597 aa18.12■□□□□ 0.49
USP29-204ENST00000600940 COPS6Q7L5N1 327 aa18.12■□□□□ 0.49
USP29-204ENST00000600940 NIM1KQ8IY84 436 aa18.11■□□□□ 0.49
USP29-204ENST00000600940 XAGE3Q8WTP9 111 aa18.11■□□□□ 0.49
USP29-204ENST00000600940 RIC1Q4ADV7 1423 aa18.1■□□□□ 0.49
USP29-204ENST00000600940 TMEM88BA6NKF7 163 aa18.1■□□□□ 0.49
USP29-204ENST00000600940 PPIP5K2O43314 1243 aa18.1■□□□□ 0.49
USP29-204ENST00000600940 PDIA6Q15084 440 aa18.1■□□□□ 0.49
USP29-204ENST00000600940 MAP1SQ66K74 1059 aaPredicted RBP18.1■□□□□ 0.49
USP29-204ENST00000600940 C3orf67Q6ZVT6 689 aa18.1■□□□□ 0.49
USP29-204ENST00000600940 TRMT112Q9UI30 125 aaKnown RBP18.1■□□□□ 0.49
USP29-204ENST00000600940 ATXN8OSP0DMR3 200 aa18.09■□□□□ 0.49
USP29-204ENST00000600940 CNTROBQ8N137 903 aa18.09■□□□□ 0.49
USP29-204ENST00000600940 RUNDC1Q96C34 613 aa18.09■□□□□ 0.49
USP29-204ENST00000600940 PASKQ96RG2 1323 aa18.08■□□□□ 0.49
USP29-204ENST00000600940 HCLS1P14317 486 aaPredicted RBP18.08■□□□□ 0.48
USP29-204ENST00000600940 SUPT20HQ8NEM7 779 aa18.08■□□□□ 0.48
USP29-204ENST00000600940 ZNF428Q96B54 188 aa18.08■□□□□ 0.48
USP29-204ENST00000600940 DDX21Q9NR30 783 aaKnown RBP eCLIP18.08■□□□□ 0.48
USP29-204ENST00000600940 ITGBL1O95965 494 aaPredicted RBP18.07■□□□□ 0.48
USP29-204ENST00000600940 AOC3Q16853 763 aa18.07■□□□□ 0.48
USP29-204ENST00000600940 KRT24Q2M2I5 525 aa18.07■□□□□ 0.48
USP29-204ENST00000600940 SLC10A5Q5PT55 438 aa18.07■□□□□ 0.48
USP29-204ENST00000600940 HDGFL1Q5TGJ6 251 aa18.07■□□□□ 0.48
USP29-204ENST00000600940 DDX46Q7L014 1031 aaKnown RBP18.07■□□□□ 0.48
USP29-204ENST00000600940 LRP10Q7Z4F1 713 aa18.07■□□□□ 0.48
USP29-204ENST00000600940 AIDAQ96BJ3 306 aa18.07■□□□□ 0.48
USP29-204ENST00000600940 ABT1Q9ULW3 272 aaKnown RBP18.07■□□□□ 0.48
USP29-204ENST00000600940 ATP6V0A2Q9Y487 856 aa18.07■□□□□ 0.48
USP29-204ENST00000600940 CNTNAP1P78357 1384 aa18.06■□□□□ 0.48
USP29-204ENST00000600940 ABCC4O15439 1325 aa18.06■□□□□ 0.48
USP29-204ENST00000600940 CHL1O00533 1208 aa18.06■□□□□ 0.48
USP29-204ENST00000600940 BBOX1O75936 387 aa18.06■□□□□ 0.48
USP29-204ENST00000600940 TCIRG1Q13488 830 aa18.06■□□□□ 0.48
USP29-204ENST00000600940 DPP8Q6V1X1 898 aaPredicted RBP18.06■□□□□ 0.48
USP29-204ENST00000600940 NLRP10Q86W26 655 aa18.06■□□□□ 0.48
USP29-204ENST00000600940 CHPF2Q9P2E5 772 aa18.06■□□□□ 0.48
USP29-204ENST00000600940 SH3TC1Q8TE82 1336 aa18.05■□□□□ 0.48
USP29-204ENST00000600940 SLC51AQ86UW1 340 aa18.05■□□□□ 0.48
USP29-204ENST00000600940 ADAMTS8Q9UP79 889 aa18.05■□□□□ 0.48
USP29-204ENST00000600940 EPS15P42566 896 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms