RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-223ENST00000599223 RNF123Q5XPI4 1314 aa19.33■□□□□ 0.69
IRF3-223ENST00000599223 PASKQ96RG2 1323 aa19.33■□□□□ 0.69
IRF3-223ENST00000599223 IQCA1LA6NCM1 817 aa19.33■□□□□ 0.68
IRF3-223ENST00000599223 ALDH1B1P30837 517 aa19.33■□□□□ 0.68
IRF3-223ENST00000599223 HOXA10P31260 410 aaPredicted RBP19.33■□□□□ 0.68
IRF3-223ENST00000599223 TMPOP42166 694 aaKnown RBP19.33■□□□□ 0.68
IRF3-223ENST00000599223 GIGYF2Q6Y7W6 1299 aaKnown RBP19.33■□□□□ 0.68
IRF3-223ENST00000599223 FZD9O00144 591 aa19.32■□□□□ 0.68
IRF3-223ENST00000599223 HSPA1AP0DMV8 641 aaKnown RBP19.32■□□□□ 0.68
IRF3-223ENST00000599223 HSPA1BP0DMV9 641 aaKnown RBP19.32■□□□□ 0.68
IRF3-223ENST00000599223 RALBP1Q15311 655 aa19.32■□□□□ 0.68
IRF3-223ENST00000599223 LDHDQ86WU2 507 aa19.32■□□□□ 0.68
IRF3-223ENST00000599223 CCDC146Q8IYE0 955 aa19.32■□□□□ 0.68
IRF3-223ENST00000599223 RPGRQ92834 1020 aaKnown RBP19.32■□□□□ 0.68
IRF3-223ENST00000599223 PSMD1Q99460 953 aa19.32■□□□□ 0.68
IRF3-223ENST00000599223 PNNQ9H307 717 aaKnown RBP19.32■□□□□ 0.68
IRF3-223ENST00000599223 TAF1P21675 1872 aa19.32■□□□□ 0.68
IRF3-223ENST00000599223 EIF2S2P20042 333 aaKnown RBP19.31■□□□□ 0.68
IRF3-223ENST00000599223 KRT24Q2M2I5 525 aa19.31■□□□□ 0.68
IRF3-223ENST00000599223 CREBZFQ9NS37 354 aa19.31■□□□□ 0.68
IRF3-223ENST00000599223 MKRN1Q9UHC7 482 aaKnown RBP19.31■□□□□ 0.68
IRF3-223ENST00000599223 DDX60Q8IY21 1712 aaKnown RBP19.31■□□□□ 0.68
IRF3-223ENST00000599223 PPEF1O14829 653 aaPredicted RBP19.29■□□□□ 0.68
IRF3-223ENST00000599223 EPHX2P34913 555 aa19.29■□□□□ 0.68
IRF3-223ENST00000599223 EAPPQ56P03 285 aaPredicted RBP19.29■□□□□ 0.68
IRF3-223ENST00000599223 NECTIN2Q92692 538 aa19.29■□□□□ 0.68
IRF3-223ENST00000599223 HACL1Q9UJ83 578 aa19.29■□□□□ 0.68
IRF3-223ENST00000599223 MYBBP1AQ9BQG0 1328 aaKnown RBP19.28■□□□□ 0.68
IRF3-223ENST00000599223 TCERG1O14776 1098 aaKnown RBP19.28■□□□□ 0.68
IRF3-223ENST00000599223 ITGBL1O95965 494 aaPredicted RBP19.28■□□□□ 0.68
IRF3-223ENST00000599223 CNTNAP1P78357 1384 aa19.28■□□□□ 0.68
IRF3-223ENST00000599223 LRRC37AA6NMS7 1700 aa19.28■□□□□ 0.68
IRF3-223ENST00000599223 COL4A1P02462 1669 aa19.27■□□□□ 0.68
IRF3-223ENST00000599223 DDX10Q13206 875 aaKnown RBP19.27■□□□□ 0.68
IRF3-223ENST00000599223 GPC2Q8N158 579 aa19.27■□□□□ 0.68
IRF3-223ENST00000599223 CRAMP1Q96RY5 1269 aa19.27■□□□□ 0.68
IRF3-223ENST00000599223 DUOX1Q9NRD9 1551 aa19.27■□□□□ 0.67
IRF3-223ENST00000599223 ABCC4O15439 1325 aa19.26■□□□□ 0.67
IRF3-223ENST00000599223 LMOD3Q0VAK6 560 aa19.26■□□□□ 0.67
IRF3-223ENST00000599223 NEUROD2Q15784 382 aa19.26■□□□□ 0.67
IRF3-223ENST00000599223 PARP10Q53GL7 1025 aa19.26■□□□□ 0.67
IRF3-223ENST00000599223 CC2D2BQ6DHV5 1058 aa19.26■□□□□ 0.67
IRF3-223ENST00000599223 XAGE3Q8WTP9 111 aa19.26■□□□□ 0.67
IRF3-223ENST00000599223 RBM17Q96I25 401 aaKnown RBP19.26■□□□□ 0.67
IRF3-223ENST00000599223 BABAM1Q9NWV8 329 aa19.26■□□□□ 0.67
IRF3-223ENST00000599223 TRIM35Q9UPQ4 493 aa19.26■□□□□ 0.67
IRF3-223ENST00000599223 MAP1SQ66K74 1059 aaPredicted RBP19.25■□□□□ 0.67
IRF3-223ENST00000599223 COPS6Q7L5N1 327 aa19.25■□□□□ 0.67
IRF3-223ENST00000599223 PPP1R42Q7Z4L9 355 aa19.25■□□□□ 0.67
IRF3-223ENST00000599223 ZNF428Q96B54 188 aa19.25■□□□□ 0.67
IRF3-223ENST00000599223 UTP14AQ9BVJ6 771 aaKnown RBP19.25■□□□□ 0.67
IRF3-223ENST00000599223 CHL1O00533 1208 aa19.24■□□□□ 0.67
IRF3-223ENST00000599223 SCNN1DP51172 638 aa19.24■□□□□ 0.67
IRF3-223ENST00000599223 AIMP1Q12904 312 aaKnown RBP19.24■□□□□ 0.67
IRF3-223ENST00000599223 NLRP10Q86W26 655 aa19.24■□□□□ 0.67
IRF3-223ENST00000599223 JDP2Q8WYK2 163 aa19.24■□□□□ 0.67
IRF3-223ENST00000599223 GJA3Q9Y6H8 435 aa19.24■□□□□ 0.67
IRF3-223ENST00000599223 SLC10A5Q5PT55 438 aa19.23■□□□□ 0.67
IRF3-223ENST00000599223 LARGE2Q8N3Y3 721 aa19.23■□□□□ 0.67
IRF3-223ENST00000599223 CHPF2Q9P2E5 772 aa19.23■□□□□ 0.67
IRF3-223ENST00000599223 HCLS1P14317 486 aaPredicted RBP19.22■□□□□ 0.67
IRF3-223ENST00000599223 AOC3Q16853 763 aa19.22■□□□□ 0.67
IRF3-223ENST00000599223 TNS4Q8IZW8 715 aa19.22■□□□□ 0.67
IRF3-223ENST00000599223 NLRP3Q96P20 1036 aa19.22■□□□□ 0.67
IRF3-223ENST00000599223 CLEC11AQ9Y240 323 aa19.22■□□□□ 0.67
IRF3-223ENST00000599223 ATP6V0A2Q9Y487 856 aa19.22■□□□□ 0.67
IRF3-223ENST00000599223 THSD7BQ9C0I4 1608 aa19.22■□□□□ 0.67
IRF3-223ENST00000599223 TMEM88BA6NKF7 163 aa19.21■□□□□ 0.67
IRF3-223ENST00000599223 EIF6P56537 245 aaKnown RBP19.21■□□□□ 0.67
IRF3-223ENST00000599223 PNMA8AQ86V59 439 aaPredicted RBP19.21■□□□□ 0.67
IRF3-223ENST00000599223 RUNDC1Q96C34 613 aa19.21■□□□□ 0.67
IRF3-223ENST00000599223 TRPM7Q96QT4 1865 aa19.21■□□□□ 0.67
IRF3-223ENST00000599223 DDX21Q9NR30 783 aaKnown RBP eCLIP19.21■□□□□ 0.67
IRF3-223ENST00000599223 PPIP5K2O43314 1243 aa19.2■□□□□ 0.66
IRF3-223ENST00000599223 CAPN15O75808 1086 aa19.2■□□□□ 0.66
IRF3-223ENST00000599223 EPS15P42566 896 aa19.2■□□□□ 0.66
IRF3-223ENST00000599223 CNTROBQ8N137 903 aa19.2■□□□□ 0.66
IRF3-223ENST00000599223 ADAMTS8Q9UP79 889 aa19.2■□□□□ 0.66
IRF3-223ENST00000599223 LAS1LQ9Y4W2 734 aaKnown RBP19.2■□□□□ 0.66
IRF3-223ENST00000599223 VEGFBP49765 207 aa19.19■□□□□ 0.66
IRF3-223ENST00000599223 FMR1Q06787 632 aaKnown RBP eCLIP19.19■□□□□ 0.66
IRF3-223ENST00000599223 TCIRG1Q13488 830 aa19.19■□□□□ 0.66
IRF3-223ENST00000599223 GRIPAP1Q4V328 841 aa19.19■□□□□ 0.66
IRF3-223ENST00000599223 HSP90AB3PQ58FF7 597 aa19.19■□□□□ 0.66
IRF3-223ENST00000599223 NIM1KQ8IY84 436 aa19.19■□□□□ 0.66
IRF3-223ENST00000599223 FOXN1O15353 648 aa19.18■□□□□ 0.66
IRF3-223ENST00000599223 WDR43Q15061 677 aaKnown RBP eCLIP19.18■□□□□ 0.66
IRF3-223ENST00000599223 HDGFL1Q5TGJ6 251 aa19.18■□□□□ 0.66
IRF3-223ENST00000599223 TRMT112Q9UI30 125 aaKnown RBP19.18■□□□□ 0.66
IRF3-223ENST00000599223 SH3TC1Q8TE82 1336 aa19.18■□□□□ 0.66
IRF3-223ENST00000599223 LMOD1P29536 600 aaPredicted RBP19.17■□□□□ 0.66
IRF3-223ENST00000599223 RTFDC1Q9BY42 306 aaPredicted RBP19.17■□□□□ 0.66
IRF3-223ENST00000599223 RASSF10A6NK89 507 aa19.15■□□□□ 0.66
IRF3-223ENST00000599223 CXCL9Q07325 125 aa19.15■□□□□ 0.66
IRF3-223ENST00000599223 MBIPQ9NS73 344 aa19.15■□□□□ 0.66
IRF3-223ENST00000599223 ATP5J2-PTCD1G3V325 749 aa19.14■□□□□ 0.65
IRF3-223ENST00000599223 TRAF5O00463 557 aa19.14■□□□□ 0.65
IRF3-223ENST00000599223 HOXB7P09629 217 aa19.14■□□□□ 0.65
IRF3-223ENST00000599223 GRAPQ13588 217 aa19.14■□□□□ 0.65
IRF3-223ENST00000599223 DPP8Q6V1X1 898 aaPredicted RBP19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms