RNA–Protein interactions for RNA: ENST00000593089.1

TRIM47-207, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 392 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-207ENST00000593089 NECTIN2Q92692 538 aa26.83■■□□□ 1.89
TRIM47-207ENST00000593089 IQCA1LA6NCM1 817 aa26.82■■□□□ 1.88
TRIM47-207ENST00000593089 WDR43Q15061 677 aaKnown RBP eCLIP26.82■■□□□ 1.88
TRIM47-207ENST00000593089 PPP1R42Q7Z4L9 355 aa26.82■■□□□ 1.88
TRIM47-207ENST00000593089 L3MBTL3Q96JM7 780 aaPredicted RBP26.82■■□□□ 1.88
TRIM47-207ENST00000593089 SNED1Q8TER0 1413 aa26.82■■□□□ 1.88
TRIM47-207ENST00000593089 HOXA10P31260 410 aaPredicted RBP26.81■■□□□ 1.88
TRIM47-207ENST00000593089 PARP10Q53GL7 1025 aa26.81■■□□□ 1.88
TRIM47-207ENST00000593089 C3orf67Q6ZVT6 689 aa26.8■■□□□ 1.88
TRIM47-207ENST00000593089 RUNDC1Q96C34 613 aa26.8■■□□□ 1.88
TRIM47-207ENST00000593089 RBM17Q96I25 401 aaKnown RBP26.8■■□□□ 1.88
TRIM47-207ENST00000593089 PSMD1Q99460 953 aa26.8■■□□□ 1.88
TRIM47-207ENST00000593089 TAF1DQ9H5J8 278 aaPredicted RBP26.8■■□□□ 1.88
TRIM47-207ENST00000593089 LAS1LQ9Y4W2 734 aaKnown RBP26.8■■□□□ 1.88
TRIM47-207ENST00000593089 TCERG1O14776 1098 aaKnown RBP26.79■■□□□ 1.88
TRIM47-207ENST00000593089 AIMP1Q12904 312 aaKnown RBP26.79■■□□□ 1.88
TRIM47-207ENST00000593089 KRT24Q2M2I5 525 aa26.79■■□□□ 1.88
TRIM47-207ENST00000593089 CC2D2BQ6DHV5 1058 aa26.79■■□□□ 1.88
TRIM47-207ENST00000593089 ANKRD36CQ5JPF3 1778 aa26.79■■□□□ 1.88
TRIM47-207ENST00000593089 SLC51AQ86UW1 340 aa26.78■■□□□ 1.88
TRIM47-207ENST00000593089 CRAMP1Q96RY5 1269 aa26.78■■□□□ 1.88
TRIM47-207ENST00000593089 UTP14AQ9BVJ6 771 aaKnown RBP26.78■■□□□ 1.88
TRIM47-207ENST00000593089 FZD9O00144 591 aa26.77■■□□□ 1.88
TRIM47-207ENST00000593089 PPEF1O14829 653 aaPredicted RBP26.77■■□□□ 1.88
TRIM47-207ENST00000593089 COPS6Q7L5N1 327 aa26.77■■□□□ 1.88
TRIM47-207ENST00000593089 XAGE3Q8WTP9 111 aa26.77■■□□□ 1.88
TRIM47-207ENST00000593089 JDP2Q8WYK2 163 aa26.77■■□□□ 1.88
TRIM47-207ENST00000593089 NLRP3Q96P20 1036 aa26.77■■□□□ 1.88
TRIM47-207ENST00000593089 TRIM35Q9UPQ4 493 aa26.77■■□□□ 1.88
TRIM47-207ENST00000593089 CHL1O00533 1208 aa26.76■■□□□ 1.87
TRIM47-207ENST00000593089 EAPPQ56P03 285 aaPredicted RBP26.76■■□□□ 1.87
TRIM47-207ENST00000593089 LDHDQ86WU2 507 aa26.76■■□□□ 1.87
TRIM47-207ENST00000593089 HACL1Q9UJ83 578 aa26.76■■□□□ 1.87
TRIM47-207ENST00000593089 ADAMTS8Q9UP79 889 aa26.76■■□□□ 1.87
TRIM47-207ENST00000593089 RNF123Q5XPI4 1314 aa26.74■■□□□ 1.87
TRIM47-207ENST00000593089 COL4A5P29400 1685 aa26.74■■□□□ 1.87
TRIM47-207ENST00000593089 EPHX2P34913 555 aa26.73■■□□□ 1.87
TRIM47-207ENST00000593089 GRIPAP1Q4V328 841 aa26.73■■□□□ 1.87
TRIM47-207ENST00000593089 HSP90AB3PQ58FF7 597 aa26.73■■□□□ 1.87
TRIM47-207ENST00000593089 SLC10A5Q5PT55 438 aa26.73■■□□□ 1.87
TRIM47-207ENST00000593089 DDX21Q9NR30 783 aaKnown RBP eCLIP26.73■■□□□ 1.87
TRIM47-207ENST00000593089 LAMB2P55268 1798 aa26.72■■□□□ 1.87
TRIM47-207ENST00000593089 GPC2Q8N158 579 aa26.72■■□□□ 1.87
TRIM47-207ENST00000593089 CREBZFQ9NS37 354 aa26.72■■□□□ 1.87
TRIM47-207ENST00000593089 CLEC11AQ9Y240 323 aa26.72■■□□□ 1.87
TRIM47-207ENST00000593089 EIF6P56537 245 aaKnown RBP26.71■■□□□ 1.87
TRIM47-207ENST00000593089 NLRP10Q86W26 655 aa26.71■■□□□ 1.87
TRIM47-207ENST00000593089 LARGE2Q8N3Y3 721 aa26.71■■□□□ 1.87
TRIM47-207ENST00000593089 CHPF2Q9P2E5 772 aa26.71■■□□□ 1.87
TRIM47-207ENST00000593089 GJA3Q9Y6H8 435 aa26.71■■□□□ 1.87
TRIM47-207ENST00000593089 TCIRG1Q13488 830 aa26.7■■□□□ 1.86
TRIM47-207ENST00000593089 TMX4Q9H1E5 349 aaPredicted RBP26.7■■□□□ 1.86
TRIM47-207ENST00000593089 MKRN1Q9UHC7 482 aaKnown RBP26.7■■□□□ 1.86
TRIM47-207ENST00000593089 ABCC4O15439 1325 aa26.69■■□□□ 1.86
TRIM47-207ENST00000593089 PASKQ96RG2 1323 aa26.69■■□□□ 1.86
TRIM47-207ENST00000593089 ADAMTSL1Q8N6G6 1762 aa26.69■■□□□ 1.86
TRIM47-207ENST00000593089 HCLS1P14317 486 aaPredicted RBP26.69■■□□□ 1.86
TRIM47-207ENST00000593089 COL13A1Q5TAT6 717 aaPredicted RBP26.69■■□□□ 1.86
TRIM47-207ENST00000593089 HDGFL1Q5TGJ6 251 aa26.69■■□□□ 1.86
TRIM47-207ENST00000593089 ZNF428Q96B54 188 aa26.69■■□□□ 1.86
TRIM47-207ENST00000593089 PRKRIP1Q9H875 184 aaPredicted RBP26.69■■□□□ 1.86
TRIM47-207ENST00000593089 TRMT112Q9UI30 125 aaKnown RBP26.69■■□□□ 1.86
TRIM47-207ENST00000593089 HSPA1AP0DMV8 641 aaKnown RBP26.68■■□□□ 1.86
TRIM47-207ENST00000593089 HSPA1BP0DMV9 641 aaKnown RBP26.68■■□□□ 1.86
TRIM47-207ENST00000593089 PNMA8AQ86V59 439 aaPredicted RBP26.68■■□□□ 1.86
TRIM47-207ENST00000593089 ATP6V0A2Q9Y487 856 aa26.68■■□□□ 1.86
TRIM47-207ENST00000593089 PCNTO95613 3336 aa26.67■■□□□ 1.86
TRIM47-207ENST00000593089 PPIP5K2O43314 1243 aa26.66■■□□□ 1.86
TRIM47-207ENST00000593089 ITGBL1O95965 494 aaPredicted RBP26.66■■□□□ 1.86
TRIM47-207ENST00000593089 SH3TC1Q8TE82 1336 aa26.65■■□□□ 1.86
TRIM47-207ENST00000593089 LTBP1Q14766 1721 aa26.65■■□□□ 1.86
TRIM47-207ENST00000593089 HOXB7P09629 217 aa26.65■■□□□ 1.86
TRIM47-207ENST00000593089 AOC3Q16853 763 aa26.65■■□□□ 1.86
TRIM47-207ENST00000593089 NIM1KQ8IY84 436 aa26.65■■□□□ 1.86
TRIM47-207ENST00000593089 CFAP44Q96MT7 982 aa26.65■■□□□ 1.86
TRIM47-207ENST00000593089 LMOD1P29536 600 aaPredicted RBP26.64■■□□□ 1.86
TRIM47-207ENST00000593089 MAP1SQ66K74 1059 aaPredicted RBP26.64■■□□□ 1.86
TRIM47-207ENST00000593089 PLBD2Q8NHP8 589 aa26.64■■□□□ 1.86
TRIM47-207ENST00000593089 DBF4Q9UBU7 674 aaPredicted RBP26.64■■□□□ 1.86
TRIM47-207ENST00000593089 DUSP27Q5VZP5 1158 aa26.63■■□□□ 1.85
TRIM47-207ENST00000593089 DDX46Q7L014 1031 aaKnown RBP26.63■■□□□ 1.85
TRIM47-207ENST00000593089 MBIPQ9NS73 344 aa26.63■■□□□ 1.85
TRIM47-207ENST00000593089 TAF1P21675 1872 aa26.63■■□□□ 1.85
TRIM47-207ENST00000593089 TMEM88BA6NKF7 163 aa26.62■■□□□ 1.85
TRIM47-207ENST00000593089 BBOX1O75936 387 aa26.62■■□□□ 1.85
TRIM47-207ENST00000593089 ANKRD13DQ6ZTN6 518 aa26.62■■□□□ 1.85
TRIM47-207ENST00000593089 CNTROBQ8N137 903 aa26.62■■□□□ 1.85
TRIM47-207ENST00000593089 CNTNAP1P78357 1384 aa26.61■■□□□ 1.85
TRIM47-207ENST00000593089 APAF1O14727 1248 aa26.61■■□□□ 1.85
TRIM47-207ENST00000593089 SCNN1DP51172 638 aa26.61■■□□□ 1.85
TRIM47-207ENST00000593089 DPP8Q6V1X1 898 aaPredicted RBP26.61■■□□□ 1.85
TRIM47-207ENST00000593089 SP8Q8IXZ3 490 aa26.61■■□□□ 1.85
TRIM47-207ENST00000593089 SUPT20HQ8NEM7 779 aa26.61■■□□□ 1.85
TRIM47-207ENST00000593089 DDX60Q8IY21 1712 aaKnown RBP26.61■■□□□ 1.85
TRIM47-207ENST00000593089 ATP5J2-PTCD1G3V325 749 aa26.6■■□□□ 1.85
TRIM47-207ENST00000593089 EPS15P42566 896 aa26.6■■□□□ 1.85
TRIM47-207ENST00000593089 GRAPQ13588 217 aa26.6■■□□□ 1.85
TRIM47-207ENST00000593089 GRAPLQ8TC17 118 aaPredicted RBP26.6■■□□□ 1.85
TRIM47-207ENST00000593089 VPS33BQ9H267 617 aa26.6■■□□□ 1.85
TRIM47-207ENST00000593089 MPNDQ8N594 471 aa26.59■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms