RNA–Protein interactions for RNA: ENST00000592619.5

VMP1-215, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-215ENST00000592619 IDH3AP50213 366 aa10.1□□□□□ -0.79
VMP1-215ENST00000592619 ARSDP51689 593 aa10.1□□□□□ -0.79
VMP1-215ENST00000592619 C8orf34Q49A92 452 aa10.1□□□□□ -0.79
VMP1-215ENST00000592619 LDLRAD1Q5T700 205 aa10.1□□□□□ -0.79
VMP1-215ENST00000592619 MRS2Q9HD23 443 aa10.1□□□□□ -0.79
VMP1-215ENST00000592619 SCAMP3O14828 347 aaKnown RBP10.09□□□□□ -0.79
VMP1-215ENST00000592619 SORBS3O60504 671 aa10.09□□□□□ -0.79
VMP1-215ENST00000592619 C6orf118Q5T5N4 469 aa10.09□□□□□ -0.79
VMP1-215ENST00000592619 BTLAQ7Z6A9 289 aa10.09□□□□□ -0.79
VMP1-215ENST00000592619 HSH2DQ96JZ2 352 aa10.09□□□□□ -0.79
VMP1-215ENST00000592619 FRMD6Q96NE9 622 aa10.09□□□□□ -0.79
VMP1-215ENST00000592619 CFHR5Q9BXR6 569 aa10.09□□□□□ -0.79
VMP1-215ENST00000592619 NEUROD4Q9HD90 331 aa10.09□□□□□ -0.79
VMP1-215ENST00000592619 TIMMDC1Q9NPL8 285 aa10.09□□□□□ -0.79
VMP1-215ENST00000592619 FNDC3AQ9Y2H6 1198 aaKnown RBP10.09□□□□□ -0.79
VMP1-215ENST00000592619 TTLL8A6PVC2 850 aa10.08□□□□□ -0.8
VMP1-215ENST00000592619 EIF1AYO14602 144 aaKnown RBP10.08□□□□□ -0.8
VMP1-215ENST00000592619 MSX1P28360 303 aa10.08□□□□□ -0.8
VMP1-215ENST00000592619 PSMD2Q13200 908 aa10.08□□□□□ -0.8
VMP1-215ENST00000592619 SCARF1Q14162 830 aa10.08□□□□□ -0.8
VMP1-215ENST00000592619 ARSJQ5FYB0 599 aaPredicted RBP10.08□□□□□ -0.8
VMP1-215ENST00000592619 SOS2Q07890 1332 aaPredicted RBP10.07□□□□□ -0.8
VMP1-215ENST00000592619 GNA15P30679 374 aa10.07□□□□□ -0.8
VMP1-215ENST00000592619 ORC1Q13415 861 aa10.07□□□□□ -0.8
VMP1-215ENST00000592619 PDE12Q6L8Q7 609 aaKnown RBP10.07□□□□□ -0.8
VMP1-215ENST00000592619 FAM161BQ96MY7 647 aa10.07□□□□□ -0.8
VMP1-215ENST00000592619 C8orf37Q96NL8 207 aa10.07□□□□□ -0.8
VMP1-215ENST00000592619 SETDB2Q96T68 719 aa10.07□□□□□ -0.8
VMP1-215ENST00000592619 C11orf16Q9NQ32 467 aa10.07□□□□□ -0.8
VMP1-215ENST00000592619 RNF19AQ9NV58 838 aa10.07□□□□□ -0.8
VMP1-215ENST00000592619 RTCBQ9Y3I0 505 aaKnown RBP10.07□□□□□ -0.8
VMP1-215ENST00000592619 SMCPP49901 116 aaPredicted RBP10.06□□□□□ -0.8
VMP1-215ENST00000592619 LRRC69Q6ZNQ3 347 aa10.06□□□□□ -0.8
VMP1-215ENST00000592619 CRISPLD1Q9H336 500 aa10.06□□□□□ -0.8
VMP1-215ENST00000592619 A0A1W2PNR3 127 aa10.05□□□□□ -0.8
VMP1-215ENST00000592619 A6NHS1 94 aa10.05□□□□□ -0.8
VMP1-215ENST00000592619 CPNE3O75131 537 aaKnown RBP10.05□□□□□ -0.8
VMP1-215ENST00000592619 TNFRSF21O75509 655 aa10.05□□□□□ -0.8
VMP1-215ENST00000592619 CTC1Q2NKJ3 1217 aa10.05□□□□□ -0.8
VMP1-215ENST00000592619 KCNMB2Q9Y691 235 aa10.05□□□□□ -0.8
VMP1-215ENST00000592619 EPB42P16452 691 aa10.04□□□□□ -0.8
VMP1-215ENST00000592619 RHOQP17081 205 aa10.04□□□□□ -0.8
VMP1-215ENST00000592619 METTL5Q9NRN9 209 aaKnown RBP10.04□□□□□ -0.8
VMP1-215ENST00000592619 DYRK1BQ9Y463 629 aa10.04□□□□□ -0.8
VMP1-215ENST00000592619 AK5Q9Y6K8 562 aa10.04□□□□□ -0.8
VMP1-215ENST00000592619 TYRO3Q06418 890 aa10.03□□□□□ -0.8
VMP1-215ENST00000592619 LCE2AQ5TA79 106 aaPredicted RBP10.03□□□□□ -0.8
VMP1-215ENST00000592619 TREML4Q6UXN2 200 aa10.03□□□□□ -0.8
VMP1-215ENST00000592619 TRIM46Q7Z4K8 759 aa10.03□□□□□ -0.8
VMP1-215ENST00000592619 NLRP8Q86W28 1048 aa10.03□□□□□ -0.8
VMP1-215ENST00000592619 CMTR1Q8N1G2 835 aaKnown RBP10.03□□□□□ -0.8
VMP1-215ENST00000592619 TMEM87AQ8NBN3 555 aa10.03□□□□□ -0.8
VMP1-215ENST00000592619 SNX29Q8TEQ0 813 aa10.03□□□□□ -0.8
VMP1-215ENST00000592619 VTI1BQ9UEU0 232 aa10.03□□□□□ -0.8
VMP1-215ENST00000592619 FAM187AA6NFU0 413 aa10.02□□□□□ -0.81
VMP1-215ENST00000592619 UBAP1LF5GYI3 381 aa10.02□□□□□ -0.81
VMP1-215ENST00000592619 EGFRP00533 1210 aa10.02□□□□□ -0.81
VMP1-215ENST00000592619 F11P03951 625 aa10.02□□□□□ -0.81
VMP1-215ENST00000592619 ZC3H6P61129 1189 aaKnown RBP10.02□□□□□ -0.81
VMP1-215ENST00000592619 HDLBPQ00341 1268 aaKnown RBP10.02□□□□□ -0.81
VMP1-215ENST00000592619 TRIP4Q15650 581 aaPredicted RBP10.02□□□□□ -0.81
VMP1-215ENST00000592619 SAMD5Q5TGI4 173 aa10.02□□□□□ -0.81
VMP1-215ENST00000592619 ZNF438Q7Z4V0 828 aa10.02□□□□□ -0.81
VMP1-215ENST00000592619 SPG7Q9UQ90 795 aa10.02□□□□□ -0.81
VMP1-215ENST00000592619 GIPC1O14908 333 aa10.01□□□□□ -0.81
VMP1-215ENST00000592619 GRNP28799 593 aaKnown RBP10.01□□□□□ -0.81
VMP1-215ENST00000592619 ELP3Q9H9T3 547 aa10.01□□□□□ -0.81
VMP1-215ENST00000592619 ZFYVE28Q9HCC9 887 aa10.01□□□□□ -0.81
VMP1-215ENST00000592619 USP20Q9Y2K6 914 aa10.01□□□□□ -0.81
VMP1-215ENST00000592619 GJA3Q9Y6H8 435 aa10.01□□□□□ -0.81
VMP1-215ENST00000592619 FIGNL2A6NMB9 653 aa10□□□□□ -0.81
VMP1-215ENST00000592619 DGAT1O75907 488 aa10□□□□□ -0.81
VMP1-215ENST00000592619 BMP1P13497 986 aa10□□□□□ -0.81
VMP1-215ENST00000592619 PKDCCQ504Y2 493 aa10□□□□□ -0.81
VMP1-215ENST00000592619 CRIPAKQ8N1N5 446 aa10□□□□□ -0.81
VMP1-215ENST00000592619 CEP63Q96MT8 703 aa10□□□□□ -0.81
VMP1-215ENST00000592619 FOXD3Q9UJU5 478 aaPredicted RBP10□□□□□ -0.81
VMP1-215ENST00000592619 LBRQ14739 615 aaKnown RBP9.99□□□□□ -0.81
VMP1-215ENST00000592619 METTL16Q86W50 562 aaKnown RBP9.99□□□□□ -0.81
VMP1-215ENST00000592619 PGBD3Q8N328 593 aa9.99□□□□□ -0.81
VMP1-215ENST00000592619 CCDC74AQ96AQ1 378 aa9.99□□□□□ -0.81
VMP1-215ENST00000592619 ZFP42Q96MM3 310 aa9.99□□□□□ -0.81
VMP1-215ENST00000592619 PHACTR2O75167 634 aa9.98□□□□□ -0.81
VMP1-215ENST00000592619 ERCC5P28715 1186 aaPredicted RBP9.98□□□□□ -0.81
VMP1-215ENST00000592619 KCNQ4P56696 695 aa9.98□□□□□ -0.81
VMP1-215ENST00000592619 FANCCQ00597 558 aa9.98□□□□□ -0.81
VMP1-215ENST00000592619 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.98□□□□□ -0.812e-7■■■■■ 32.6
VMP1-215ENST00000592619 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.98□□□□□ -0.81
VMP1-215ENST00000592619 CRELD1Q96HD1 420 aa9.98□□□□□ -0.81
VMP1-215ENST00000592619 RUBCNLQ9H714 662 aa9.98□□□□□ -0.81
VMP1-215ENST00000592619 TMEM63CQ9P1W3 806 aa9.98□□□□□ -0.81
VMP1-215ENST00000592619 DNMT3LQ9UJW3 386 aa9.98□□□□□ -0.81
VMP1-215ENST00000592619 XYLBO75191 536 aa9.97□□□□□ -0.81
VMP1-215ENST00000592619 EIF4BP23588 611 aaKnown RBP9.97□□□□□ -0.81
VMP1-215ENST00000592619 USPL1Q5W0Q7 1092 aa9.97□□□□□ -0.81
VMP1-215ENST00000592619 RNF34Q969K3 372 aa9.97□□□□□ -0.81
VMP1-215ENST00000592619 GPAMQ9HCL2 828 aa9.97□□□□□ -0.81
VMP1-215ENST00000592619 BRD7Q9NPI1 651 aa9.97□□□□□ -0.81
VMP1-215ENST00000592619 USP35Q9P2H5 1018 aa9.97□□□□□ -0.81
VMP1-215ENST00000592619 CTSHP09668 335 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms