RNA–Protein interactions for RNA: ENST00000592064.1

RTN2-212, Transcript of reticulon 2, humanhuman

TSL 2

Gene RTN2, Length 915 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN2-212ENST00000592064 SUSD4Q5VX71 490 aa23.41■■□□□ 1.34
RTN2-212ENST00000592064 PNMA8AQ86V59 439 aaPredicted RBP23.41■■□□□ 1.34
RTN2-212ENST00000592064 TSPYL4Q9UJ04 414 aa23.41■■□□□ 1.34
RTN2-212ENST00000592064 IBTKQ9P2D0 1353 aaPredicted RBP23.4■■□□□ 1.34
RTN2-212ENST00000592064 GIGYF2Q6Y7W6 1299 aaKnown RBP23.4■■□□□ 1.34
RTN2-212ENST00000592064 ZNF34Q8IZ26 560 aa23.4■■□□□ 1.34
RTN2-212ENST00000592064 GPC2Q8N158 579 aa23.4■■□□□ 1.34
RTN2-212ENST00000592064 RBM17Q96I25 401 aaKnown RBP23.4■■□□□ 1.34
RTN2-212ENST00000592064 UBN2Q6ZU65 1347 aa23.39■■□□□ 1.34
RTN2-212ENST00000592064 PPP1R42Q7Z4L9 355 aa23.39■■□□□ 1.33
RTN2-212ENST00000592064 RNF123Q5XPI4 1314 aa23.38■■□□□ 1.33
RTN2-212ENST00000592064 TMEM88BA6NKF7 163 aa23.38■■□□□ 1.33
RTN2-212ENST00000592064 ITGBL1O95965 494 aaPredicted RBP23.38■■□□□ 1.33
RTN2-212ENST00000592064 EIF6P56537 245 aaKnown RBP23.38■■□□□ 1.33
RTN2-212ENST00000592064 RIPK4P57078 832 aa23.38■■□□□ 1.33
RTN2-212ENST00000592064 CRAMP1Q96RY5 1269 aa23.38■■□□□ 1.33
RTN2-212ENST00000592064 RIC1Q4ADV7 1423 aa23.38■■□□□ 1.33
RTN2-212ENST00000592064 CAPN15O75808 1086 aa23.37■■□□□ 1.33
RTN2-212ENST00000592064 EIF2S2P20042 333 aaKnown RBP23.37■■□□□ 1.33
RTN2-212ENST00000592064 PARP10Q53GL7 1025 aa23.37■■□□□ 1.33
RTN2-212ENST00000592064 NTSR2O95665 410 aa23.36■■□□□ 1.33
RTN2-212ENST00000592064 NLRP3Q96P20 1036 aa23.36■■□□□ 1.33
RTN2-212ENST00000592064 TMX4Q9H1E5 349 aaPredicted RBP23.36■■□□□ 1.33
RTN2-212ENST00000592064 BABAM1Q9NWV8 329 aa23.36■■□□□ 1.33
RTN2-212ENST00000592064 CNTNAP1P78357 1384 aa23.36■■□□□ 1.33
RTN2-212ENST00000592064 SNED1Q8TER0 1413 aa23.35■■□□□ 1.33
RTN2-212ENST00000592064 PPEF1O14829 653 aaPredicted RBP23.35■■□□□ 1.33
RTN2-212ENST00000592064 CNTROBQ8N137 903 aa23.35■■□□□ 1.33
RTN2-212ENST00000592064 LARGE2Q8N3Y3 721 aa23.35■■□□□ 1.33
RTN2-212ENST00000592064 GJA3Q9Y6H8 435 aa23.35■■□□□ 1.33
RTN2-212ENST00000592064 TCERG1O14776 1098 aaKnown RBP23.34■■□□□ 1.33
RTN2-212ENST00000592064 LMOD3Q0VAK6 560 aa23.34■■□□□ 1.33
RTN2-212ENST00000592064 RALBP1Q15311 655 aa23.34■■□□□ 1.33
RTN2-212ENST00000592064 UTP14AQ9BVJ6 771 aaKnown RBP23.34■■□□□ 1.33
RTN2-212ENST00000592064 LMOD1P29536 600 aaPredicted RBP23.33■■□□□ 1.33
RTN2-212ENST00000592064 PDIA6Q15084 440 aa23.33■■□□□ 1.33
RTN2-212ENST00000592064 MAP1SQ66K74 1059 aaPredicted RBP23.33■■□□□ 1.33
RTN2-212ENST00000592064 SLC10A5Q5PT55 438 aa23.32■■□□□ 1.32
RTN2-212ENST00000592064 LRP10Q7Z4F1 713 aa23.32■■□□□ 1.32
RTN2-212ENST00000592064 TMPOP42166 694 aaKnown RBP23.31■■□□□ 1.32
RTN2-212ENST00000592064 VEGFBP49765 207 aa23.31■■□□□ 1.32
RTN2-212ENST00000592064 C3orf67Q6ZVT6 689 aa23.31■■□□□ 1.32
RTN2-212ENST00000592064 ADAMTSL1Q8N6G6 1762 aa23.3■■□□□ 1.32
RTN2-212ENST00000592064 HSP90AB3PQ58FF7 597 aa23.3■■□□□ 1.32
RTN2-212ENST00000592064 NIM1KQ8IY84 436 aa23.3■■□□□ 1.32
RTN2-212ENST00000592064 ANXA1P04083 346 aa23.29■■□□□ 1.32
RTN2-212ENST00000592064 PROSER3Q2NL68 480 aa23.29■■□□□ 1.32
RTN2-212ENST00000592064 AIDAQ96BJ3 306 aa23.29■■□□□ 1.32
RTN2-212ENST00000592064 VPS33BQ9H267 617 aa23.29■■□□□ 1.32
RTN2-212ENST00000592064 ATP6V0A2Q9Y487 856 aa23.29■■□□□ 1.32
RTN2-212ENST00000592064 PPIP5K2O43314 1243 aa23.28■■□□□ 1.32
RTN2-212ENST00000592064 COPS6Q7L5N1 327 aa23.28■■□□□ 1.32
RTN2-212ENST00000592064 FOXN1O15353 648 aa23.27■■□□□ 1.32
RTN2-212ENST00000592064 AIMP1Q12904 312 aaKnown RBP23.27■■□□□ 1.32
RTN2-212ENST00000592064 DEFB115Q30KQ5 88 aa23.27■■□□□ 1.32
RTN2-212ENST00000592064 NECTIN2Q92692 538 aa23.27■■□□□ 1.32
RTN2-212ENST00000592064 COL4A5P29400 1685 aa23.27■■□□□ 1.32
RTN2-212ENST00000592064 RASSF10A6NK89 507 aa23.26■■□□□ 1.31
RTN2-212ENST00000592064 BBOX1O75936 387 aa23.26■■□□□ 1.31
RTN2-212ENST00000592064 EPS15P42566 896 aa23.26■■□□□ 1.31
RTN2-212ENST00000592064 SCNN1DP51172 638 aa23.26■■□□□ 1.31
RTN2-212ENST00000592064 NEUROD2Q15784 382 aa23.26■■□□□ 1.31
RTN2-212ENST00000592064 SUPT20HQ8NEM7 779 aa23.26■■□□□ 1.31
RTN2-212ENST00000592064 XAGE3Q8WTP9 111 aa23.26■■□□□ 1.31
RTN2-212ENST00000592064 AOC3Q16853 763 aa23.25■■□□□ 1.31
RTN2-212ENST00000592064 USP50Q70EL3 339 aaPredicted RBP23.25■■□□□ 1.31
RTN2-212ENST00000592064 SLC51AQ86UW1 340 aa23.25■■□□□ 1.31
RTN2-212ENST00000592064 DDX21Q9NR30 783 aaKnown RBP eCLIP23.25■■□□□ 1.31
RTN2-212ENST00000592064 ABT1Q9ULW3 272 aaKnown RBP23.25■■□□□ 1.31
RTN2-212ENST00000592064 ABCC4O15439 1325 aa23.25■■□□□ 1.31
RTN2-212ENST00000592064 CTCFP49711 727 aaPredicted RBP23.24■■□□□ 1.31
RTN2-212ENST00000592064 TCIRG1Q13488 830 aa23.24■■□□□ 1.31
RTN2-212ENST00000592064 NLRP10Q86W26 655 aa23.24■■□□□ 1.31
RTN2-212ENST00000592064 PRDM10Q9NQV6 1147 aa23.24■■□□□ 1.31
RTN2-212ENST00000592064 TRMT112Q9UI30 125 aaKnown RBP23.24■■□□□ 1.31
RTN2-212ENST00000592064 CHL1O00533 1208 aa23.23■■□□□ 1.31
RTN2-212ENST00000592064 HCLS1P14317 486 aaPredicted RBP23.23■■□□□ 1.31
RTN2-212ENST00000592064 DPP8Q6V1X1 898 aaPredicted RBP23.23■■□□□ 1.31
RTN2-212ENST00000592064 DDX46Q7L014 1031 aaKnown RBP23.23■■□□□ 1.31
RTN2-212ENST00000592064 SP8Q8IXZ3 490 aa23.23■■□□□ 1.31
RTN2-212ENST00000592064 CCDC146Q8IYE0 955 aa23.23■■□□□ 1.31
RTN2-212ENST00000592064 WBP1LQ9NX94 342 aa23.23■■□□□ 1.31
RTN2-212ENST00000592064 ZNRF3Q9ULT6 936 aa23.23■■□□□ 1.31
RTN2-212ENST00000592064 MPNDQ8N594 471 aa23.22■■□□□ 1.31
RTN2-212ENST00000592064 RTFDC1Q9BY42 306 aaPredicted RBP23.22■■□□□ 1.31
RTN2-212ENST00000592064 LAS1LQ9Y4W2 734 aaKnown RBP23.22■■□□□ 1.31
RTN2-212ENST00000592064 SH3TC1Q8TE82 1336 aa23.22■■□□□ 1.31
RTN2-212ENST00000592064 LTBP1Q14766 1721 aa23.22■■□□□ 1.31
RTN2-212ENST00000592064 MYBBP1AQ9BQG0 1328 aaKnown RBP23.21■■□□□ 1.31
RTN2-212ENST00000592064 WDR33Q9C0J8 1336 aaKnown RBP23.21■■□□□ 1.31
RTN2-212ENST00000592064 ANKRD36CQ5JPF3 1778 aa23.2■■□□□ 1.3
RTN2-212ENST00000592064 CXCL9Q07325 125 aa23.2■■□□□ 1.3
RTN2-212ENST00000592064 RUNDC1Q96C34 613 aa23.2■■□□□ 1.3
RTN2-212ENST00000592064 ADARB2Q9NS39 739 aaKnown RBP23.2■■□□□ 1.3
RTN2-212ENST00000592064 GPRC5DQ9NZD1 345 aa23.2■■□□□ 1.3
RTN2-212ENST00000592064 MAP2K1Q02750 393 aaPredicted RBP23.19■■□□□ 1.3
RTN2-212ENST00000592064 DDX10Q13206 875 aaKnown RBP23.19■■□□□ 1.3
RTN2-212ENST00000592064 GRAPQ13588 217 aa23.19■■□□□ 1.3
RTN2-212ENST00000592064 WDR43Q15061 677 aaKnown RBP eCLIP23.19■■□□□ 1.3
RTN2-212ENST00000592064 KRT24Q2M2I5 525 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms