RNA–Protein interactions for RNA: ENST00000589949.1

H3F3B-209, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 842 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-209ENST00000589949 HOXA10P31260 410 aaPredicted RBP23.61■■□□□ 1.37
H3F3B-209ENST00000589949 WDR43Q15061 677 aaKnown RBP eCLIP23.61■■□□□ 1.37
H3F3B-209ENST00000589949 ZNF541Q9H0D2 1346 aa23.6■■□□□ 1.37
H3F3B-209ENST00000589949 COPS6Q7L5N1 327 aa23.6■■□□□ 1.37
H3F3B-209ENST00000589949 XAGE3Q8WTP9 111 aa23.6■■□□□ 1.37
H3F3B-209ENST00000589949 LAS1LQ9Y4W2 734 aaKnown RBP23.6■■□□□ 1.37
H3F3B-209ENST00000589949 RTKN2Q8IZC4 609 aa23.59■■□□□ 1.37
H3F3B-209ENST00000589949 SYNE4Q8N205 404 aa23.59■■□□□ 1.37
H3F3B-209ENST00000589949 KLRG1Q96E93 195 aa23.59■■□□□ 1.37
H3F3B-209ENST00000589949 COL4A5P29400 1685 aa23.58■■□□□ 1.37
H3F3B-209ENST00000589949 AIMP1Q12904 312 aaKnown RBP23.58■■□□□ 1.37
H3F3B-209ENST00000589949 RPGRQ92834 1020 aaKnown RBP23.57■■□□□ 1.36
H3F3B-209ENST00000589949 PARP10Q53GL7 1025 aa23.56■■□□□ 1.36
H3F3B-209ENST00000589949 L3MBTL3Q96JM7 780 aaPredicted RBP23.56■■□□□ 1.36
H3F3B-209ENST00000589949 DDX21Q9NR30 783 aaKnown RBP eCLIP23.56■■□□□ 1.36
H3F3B-209ENST00000589949 CHPF2Q9P2E5 772 aa23.56■■□□□ 1.36
H3F3B-209ENST00000589949 IARSP41252 1262 aaKnown RBP23.55■■□□□ 1.36
H3F3B-209ENST00000589949 SLC10A5Q5PT55 438 aa23.55■■□□□ 1.36
H3F3B-209ENST00000589949 PPP1R42Q7Z4L9 355 aa23.55■■□□□ 1.36
H3F3B-209ENST00000589949 ZNF428Q96B54 188 aa23.55■■□□□ 1.36
H3F3B-209ENST00000589949 CRAMP1Q96RY5 1269 aa23.55■■□□□ 1.36
H3F3B-209ENST00000589949 UTP14AQ9BVJ6 771 aaKnown RBP23.55■■□□□ 1.36
H3F3B-209ENST00000589949 FZD9O00144 591 aa23.54■■□□□ 1.36
H3F3B-209ENST00000589949 TCERG1O14776 1098 aaKnown RBP23.54■■□□□ 1.36
H3F3B-209ENST00000589949 NLRP10Q86W26 655 aa23.54■■□□□ 1.36
H3F3B-209ENST00000589949 JMYQ8N9B5 988 aa23.54■■□□□ 1.36
H3F3B-209ENST00000589949 PSMD1Q99460 953 aa23.54■■□□□ 1.36
H3F3B-209ENST00000589949 TCIRG1Q13488 830 aa23.53■■□□□ 1.36
H3F3B-209ENST00000589949 TAF1DQ9H5J8 278 aaPredicted RBP23.53■■□□□ 1.36
H3F3B-209ENST00000589949 APAF1O14727 1248 aa23.52■■□□□ 1.36
H3F3B-209ENST00000589949 CHADLQ6NUI6 762 aa23.52■■□□□ 1.36
H3F3B-209ENST00000589949 RBM17Q96I25 401 aaKnown RBP23.52■■□□□ 1.36
H3F3B-209ENST00000589949 CFAP44Q96MT7 982 aa23.52■■□□□ 1.36
H3F3B-209ENST00000589949 MBIPQ9NS73 344 aa23.52■■□□□ 1.36
H3F3B-209ENST00000589949 ANKRD36CQ5JPF3 1778 aa23.52■■□□□ 1.36
H3F3B-209ENST00000589949 PPEF1O14829 653 aaPredicted RBP23.51■■□□□ 1.35
H3F3B-209ENST00000589949 ZNF853P0CG23 659 aa23.51■■□□□ 1.35
H3F3B-209ENST00000589949 HCLS1P14317 486 aaPredicted RBP23.51■■□□□ 1.35
H3F3B-209ENST00000589949 CCDC184Q52MB2 194 aa23.51■■□□□ 1.35
H3F3B-209ENST00000589949 IFFO2Q5TF58 517 aa23.51■■□□□ 1.35
H3F3B-209ENST00000589949 HDGFL1Q5TGJ6 251 aa23.51■■□□□ 1.35
H3F3B-209ENST00000589949 NLRP3Q96P20 1036 aa23.51■■□□□ 1.35
H3F3B-209ENST00000589949 PCNTO95613 3336 aa23.51■■□□□ 1.35
H3F3B-209ENST00000589949 DUSP27Q5VZP5 1158 aa23.5■■□□□ 1.35
H3F3B-209ENST00000589949 CC2D2BQ6DHV5 1058 aa23.5■■□□□ 1.35
H3F3B-209ENST00000589949 ABCC4O15439 1325 aa23.49■■□□□ 1.35
H3F3B-209ENST00000589949 LAMB2P55268 1798 aa23.49■■□□□ 1.35
H3F3B-209ENST00000589949 SCN4AP35499 1836 aa23.49■■□□□ 1.35
H3F3B-209ENST00000589949 IQCA1LA6NCM1 817 aa23.48■■□□□ 1.35
H3F3B-209ENST00000589949 HOXB7P09629 217 aa23.48■■□□□ 1.35
H3F3B-209ENST00000589949 HSP90AB3PQ58FF7 597 aa23.48■■□□□ 1.35
H3F3B-209ENST00000589949 RNF123Q5XPI4 1314 aa23.48■■□□□ 1.35
H3F3B-209ENST00000589949 TRMT112Q9UI30 125 aaKnown RBP23.47■■□□□ 1.35
H3F3B-209ENST00000589949 ATP6V0A2Q9Y487 856 aa23.47■■□□□ 1.35
H3F3B-209ENST00000589949 LDHDQ86WU2 507 aa23.46■■□□□ 1.35
H3F3B-209ENST00000589949 PLBD2Q8NHP8 589 aa23.46■■□□□ 1.35
H3F3B-209ENST00000589949 DBF4Q9UBU7 674 aaPredicted RBP23.46■■□□□ 1.35
H3F3B-209ENST00000589949 HACL1Q9UJ83 578 aa23.46■■□□□ 1.35
H3F3B-209ENST00000589949 ADAMTSL1Q8N6G6 1762 aa23.45■■□□□ 1.34
H3F3B-209ENST00000589949 ATP5J2-PTCD1G3V325 749 aa23.45■■□□□ 1.34
H3F3B-209ENST00000589949 ANKRD13DQ6ZTN6 518 aa23.45■■□□□ 1.34
H3F3B-209ENST00000589949 GPC2Q8N158 579 aa23.45■■□□□ 1.34
H3F3B-209ENST00000589949 JDP2Q8WYK2 163 aa23.45■■□□□ 1.34
H3F3B-209ENST00000589949 ISCA1Q9BUE6 129 aa23.45■■□□□ 1.34
H3F3B-209ENST00000589949 SH3TC1Q8TE82 1336 aa23.44■■□□□ 1.34
H3F3B-209ENST00000589949 PASKQ96RG2 1323 aa23.44■■□□□ 1.34
H3F3B-209ENST00000589949 ITGBL1O95965 494 aaPredicted RBP23.44■■□□□ 1.34
H3F3B-209ENST00000589949 EPHX2P34913 555 aa23.44■■□□□ 1.34
H3F3B-209ENST00000589949 EAPPQ56P03 285 aaPredicted RBP23.44■■□□□ 1.34
H3F3B-209ENST00000589949 TAF1P21675 1872 aa23.44■■□□□ 1.34
H3F3B-209ENST00000589949 LTBP1Q14766 1721 aa23.44■■□□□ 1.34
H3F3B-209ENST00000589949 ELL2O00472 640 aaPredicted RBP23.43■■□□□ 1.34
H3F3B-209ENST00000589949 GRIPAP1Q4V328 841 aa23.43■■□□□ 1.34
H3F3B-209ENST00000589949 LARGE2Q8N3Y3 721 aa23.43■■□□□ 1.34
H3F3B-209ENST00000589949 IFT57Q9NWB7 429 aa23.43■■□□□ 1.34
H3F3B-209ENST00000589949 COL4A1P02462 1669 aa23.42■■□□□ 1.34
H3F3B-209ENST00000589949 AOC3Q16853 763 aa23.42■■□□□ 1.34
H3F3B-209ENST00000589949 C8orf58Q8NAV2 365 aa23.42■■□□□ 1.34
H3F3B-209ENST00000589949 GJA3Q9Y6H8 435 aa23.42■■□□□ 1.34
H3F3B-209ENST00000589949 DDX60Q8IY21 1712 aaKnown RBP23.42■■□□□ 1.34
H3F3B-209ENST00000589949 SCNN1DP51172 638 aa23.41■■□□□ 1.34
H3F3B-209ENST00000589949 FAM89AQ96GI7 184 aa23.41■■□□□ 1.34
H3F3B-209ENST00000589949 RTFDC1Q9BY42 306 aaPredicted RBP23.41■■□□□ 1.34
H3F3B-209ENST00000589949 PHAXQ9H814 394 aaKnown RBP23.41■■□□□ 1.34
H3F3B-209ENST00000589949 CREBZFQ9NS37 354 aa23.41■■□□□ 1.34
H3F3B-209ENST00000589949 HYPKQ9NX55 129 aa23.41■■□□□ 1.34
H3F3B-209ENST00000589949 BBOX1O75936 387 aa23.4■■□□□ 1.34
H3F3B-209ENST00000589949 SP8Q8IXZ3 490 aa23.4■■□□□ 1.34
H3F3B-209ENST00000589949 PPIP5K2O43314 1243 aa23.39■■□□□ 1.33
H3F3B-209ENST00000589949 EPS15P42566 896 aa23.39■■□□□ 1.33
H3F3B-209ENST00000589949 EIF6P56537 245 aaKnown RBP23.39■■□□□ 1.33
H3F3B-209ENST00000589949 GNAI1P63096 354 aa23.39■■□□□ 1.33
H3F3B-209ENST00000589949 RTL5Q5HYW3 569 aaPredicted RBP23.39■■□□□ 1.33
H3F3B-209ENST00000589949 MAP1SQ66K74 1059 aaPredicted RBP23.39■■□□□ 1.33
H3F3B-209ENST00000589949 GRAPQ13588 217 aa23.38■■□□□ 1.33
H3F3B-209ENST00000589949 COL13A1Q5TAT6 717 aaPredicted RBP23.38■■□□□ 1.33
H3F3B-209ENST00000589949 DDX46Q7L014 1031 aaKnown RBP23.38■■□□□ 1.33
H3F3B-209ENST00000589949 NIM1KQ8IY84 436 aa23.38■■□□□ 1.33
H3F3B-209ENST00000589949 GRAPLQ8TC17 118 aaPredicted RBP23.38■■□□□ 1.33
H3F3B-209ENST00000589949 MKRN1Q9UHC7 482 aaKnown RBP23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 121.4 ms