RNA–Protein interactions for RNA: ENST00000589532.5

LSM7-205, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM7, Length 539 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-205ENST00000589532 LAMB2P55268 1798 aa31.18■■■□□ 2.58
LSM7-205ENST00000589532 ZNF541Q9H0D2 1346 aa31.18■■■□□ 2.58
LSM7-205ENST00000589532 ANXA1P04083 346 aa31.17■■■□□ 2.58
LSM7-205ENST00000589532 C3orf67Q6ZVT6 689 aa31.17■■■□□ 2.58
LSM7-205ENST00000589532 CHL1O00533 1208 aa31.16■■■□□ 2.58
LSM7-205ENST00000589532 POTEIP0CG38 1075 aa31.16■■■□□ 2.58
LSM7-205ENST00000589532 POTEJP0CG39 1038 aa31.16■■■□□ 2.58
LSM7-205ENST00000589532 EIF2S2P20042 333 aaKnown RBP31.16■■■□□ 2.58
LSM7-205ENST00000589532 RUNDC1Q96C34 613 aa31.16■■■□□ 2.58
LSM7-205ENST00000589532 PSMD1Q99460 953 aa31.16■■■□□ 2.58
LSM7-205ENST00000589532 PARP10Q53GL7 1025 aa31.15■■■□□ 2.58
LSM7-205ENST00000589532 SLC51AQ86UW1 340 aa31.15■■■□□ 2.58
LSM7-205ENST00000589532 KRT24Q2M2I5 525 aa31.14■■■□□ 2.58
LSM7-205ENST00000589532 IARSP41252 1262 aaKnown RBP31.13■■■□□ 2.57
LSM7-205ENST00000589532 SYNE4Q8N205 404 aa31.12■■■□□ 2.57
LSM7-205ENST00000589532 PRKRIP1Q9H875 184 aaPredicted RBP31.12■■■□□ 2.57
LSM7-205ENST00000589532 ADAMTS8Q9UP79 889 aa31.12■■■□□ 2.57
LSM7-205ENST00000589532 FZD9O00144 591 aa31.11■■■□□ 2.57
LSM7-205ENST00000589532 NEUROD2Q15784 382 aa31.11■■■□□ 2.57
LSM7-205ENST00000589532 RNF123Q5XPI4 1314 aa31.11■■■□□ 2.57
LSM7-205ENST00000589532 CC2D2BQ6DHV5 1058 aa31.11■■■□□ 2.57
LSM7-205ENST00000589532 CHADLQ6NUI6 762 aa31.11■■■□□ 2.57
LSM7-205ENST00000589532 RPGRQ92834 1020 aaKnown RBP31.11■■■□□ 2.57
LSM7-205ENST00000589532 CRAMP1Q96RY5 1269 aa31.11■■■□□ 2.57
LSM7-205ENST00000589532 IQCA1LA6NCM1 817 aa31.1■■■□□ 2.57
LSM7-205ENST00000589532 WDR43Q15061 677 aaKnown RBP eCLIP31.1■■■□□ 2.57
LSM7-205ENST00000589532 PPP1R42Q7Z4L9 355 aa31.1■■■□□ 2.57
LSM7-205ENST00000589532 TAF1DQ9H5J8 278 aaPredicted RBP31.1■■■□□ 2.57
LSM7-205ENST00000589532 SLC10A5Q5PT55 438 aa31.09■■■□□ 2.57
LSM7-205ENST00000589532 XAGE3Q8WTP9 111 aa31.09■■■□□ 2.57
LSM7-205ENST00000589532 DDX21Q9NR30 783 aaKnown RBP eCLIP31.09■■■□□ 2.57
LSM7-205ENST00000589532 LTBP1Q14766 1721 aa31.08■■■□□ 2.57
LSM7-205ENST00000589532 COPS6Q7L5N1 327 aa31.08■■■□□ 2.57
LSM7-205ENST00000589532 NECTIN2Q92692 538 aa31.08■■■□□ 2.57
LSM7-205ENST00000589532 UTP14AQ9BVJ6 771 aaKnown RBP31.07■■■□□ 2.56
LSM7-205ENST00000589532 DDX60Q8IY21 1712 aaKnown RBP31.07■■■□□ 2.56
LSM7-205ENST00000589532 PPEF1O14829 653 aaPredicted RBP31.06■■■□□ 2.56
LSM7-205ENST00000589532 HOXB7P09629 217 aa31.06■■■□□ 2.56
LSM7-205ENST00000589532 NLRP10Q86W26 655 aa31.06■■■□□ 2.56
LSM7-205ENST00000589532 RBM17Q96I25 401 aaKnown RBP31.06■■■□□ 2.56
LSM7-205ENST00000589532 PASKQ96RG2 1323 aa31.05■■■□□ 2.56
LSM7-205ENST00000589532 LDHDQ86WU2 507 aa31.05■■■□□ 2.56
LSM7-205ENST00000589532 CHPF2Q9P2E5 772 aa31.05■■■□□ 2.56
LSM7-205ENST00000589532 ABCC4O15439 1325 aa31.04■■■□□ 2.56
LSM7-205ENST00000589532 GRIPAP1Q4V328 841 aa31.04■■■□□ 2.56
LSM7-205ENST00000589532 HSP90AB3PQ58FF7 597 aa31.04■■■□□ 2.56
LSM7-205ENST00000589532 LRRC37AA6NMS7 1700 aa31.04■■■□□ 2.56
LSM7-205ENST00000589532 NLRP3Q96P20 1036 aa31.03■■■□□ 2.56
LSM7-205ENST00000589532 AIMP1Q12904 312 aaKnown RBP31.02■■■□□ 2.56
LSM7-205ENST00000589532 GPC2Q8N158 579 aa31.02■■■□□ 2.56
LSM7-205ENST00000589532 CFAP44Q96MT7 982 aa31.02■■■□□ 2.56
LSM7-205ENST00000589532 TCIRG1Q13488 830 aa31.01■■■□□ 2.55
LSM7-205ENST00000589532 HACL1Q9UJ83 578 aa31.01■■■□□ 2.55
LSM7-205ENST00000589532 ZNF853P0CG23 659 aa31■■■□□ 2.55
LSM7-205ENST00000589532 HDGFL1Q5TGJ6 251 aa31■■■□□ 2.55
LSM7-205ENST00000589532 CREBZFQ9NS37 354 aa31■■■□□ 2.55
LSM7-205ENST00000589532 LAS1LQ9Y4W2 734 aaKnown RBP31■■■□□ 2.55
LSM7-205ENST00000589532 DUOX1Q9NRD9 1551 aa31■■■□□ 2.55
LSM7-205ENST00000589532 ATP6V0A2Q9Y487 856 aa30.99■■■□□ 2.55
LSM7-205ENST00000589532 EPHX2P34913 555 aa30.98■■■□□ 2.55
LSM7-205ENST00000589532 JDP2Q8WYK2 163 aa30.98■■■□□ 2.55
LSM7-205ENST00000589532 MBIPQ9NS73 344 aa30.98■■■□□ 2.55
LSM7-205ENST00000589532 TAF1P21675 1872 aa30.97■■■□□ 2.55
LSM7-205ENST00000589532 ITGBL1O95965 494 aaPredicted RBP30.97■■■□□ 2.55
LSM7-205ENST00000589532 SH3TC1Q8TE82 1336 aa30.97■■■□□ 2.55
LSM7-205ENST00000589532 HCLS1P14317 486 aaPredicted RBP30.96■■■□□ 2.55
LSM7-205ENST00000589532 DBF4Q9UBU7 674 aaPredicted RBP30.96■■■□□ 2.55
LSM7-205ENST00000589532 COL4A1P02462 1669 aa30.96■■■□□ 2.55
LSM7-205ENST00000589532 TCERG1O14776 1098 aaKnown RBP30.95■■■□□ 2.55
LSM7-205ENST00000589532 LARGE2Q8N3Y3 721 aa30.95■■■□□ 2.55
LSM7-205ENST00000589532 PLBD2Q8NHP8 589 aa30.95■■■□□ 2.55
LSM7-205ENST00000589532 ISCA1Q9BUE6 129 aa30.95■■■□□ 2.55
LSM7-205ENST00000589532 RTFDC1Q9BY42 306 aaPredicted RBP30.95■■■□□ 2.55
LSM7-205ENST00000589532 TRMT112Q9UI30 125 aaKnown RBP30.94■■■□□ 2.54
LSM7-205ENST00000589532 SCNN1DP51172 638 aa30.93■■■□□ 2.54
LSM7-205ENST00000589532 EAPPQ56P03 285 aaPredicted RBP30.93■■■□□ 2.54
LSM7-205ENST00000589532 DUSP27Q5VZP5 1158 aa30.93■■■□□ 2.54
LSM7-205ENST00000589532 APAF1O14727 1248 aa30.92■■■□□ 2.54
LSM7-205ENST00000589532 EIF6P56537 245 aaKnown RBP30.92■■■□□ 2.54
LSM7-205ENST00000589532 PNMA8AQ86V59 439 aaPredicted RBP30.92■■■□□ 2.54
LSM7-205ENST00000589532 IFT57Q9NWB7 429 aa30.92■■■□□ 2.54
LSM7-205ENST00000589532 CNTNAP1P78357 1384 aa30.92■■■□□ 2.54
LSM7-205ENST00000589532 VPS33BQ9H267 617 aa30.91■■■□□ 2.54
LSM7-205ENST00000589532 PPIP5K2O43314 1243 aa30.9■■■□□ 2.54
LSM7-205ENST00000589532 BBOX1O75936 387 aa30.9■■■□□ 2.54
LSM7-205ENST00000589532 AOC3Q16853 763 aa30.9■■■□□ 2.54
LSM7-205ENST00000589532 ANKRD13DQ6ZTN6 518 aa30.9■■■□□ 2.54
LSM7-205ENST00000589532 HSPA1AP0DMV8 641 aaKnown RBP30.89■■■□□ 2.54
LSM7-205ENST00000589532 HSPA1BP0DMV9 641 aaKnown RBP30.89■■■□□ 2.54
LSM7-205ENST00000589532 GRAPQ13588 217 aa30.89■■■□□ 2.54
LSM7-205ENST00000589532 COL13A1Q5TAT6 717 aaPredicted RBP30.89■■■□□ 2.54
LSM7-205ENST00000589532 SP8Q8IXZ3 490 aa30.89■■■□□ 2.54
LSM7-205ENST00000589532 GRAPLQ8TC17 118 aaPredicted RBP30.89■■■□□ 2.54
LSM7-205ENST00000589532 HYPKQ9NX55 129 aa30.89■■■□□ 2.54
LSM7-205ENST00000589532 GJA3Q9Y6H8 435 aa30.89■■■□□ 2.54
LSM7-205ENST00000589532 NIM1KQ8IY84 436 aa30.88■■■□□ 2.53
LSM7-205ENST00000589532 MKRN1Q9UHC7 482 aaKnown RBP30.88■■■□□ 2.53
LSM7-205ENST00000589532 ANP32CO43423 234 aa30.87■■■□□ 2.53
LSM7-205ENST00000589532 MAP1SQ66K74 1059 aaPredicted RBP30.86■■■□□ 2.53
LSM7-205ENST00000589532 DDX46Q7L014 1031 aaKnown RBP30.86■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms