RNA–Protein interactions for RNA: ENST00000589054.5

NEDD4L-225, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, human

TSL 3 BASIC

Gene NEDD4L, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEDD4L-225	ENST00000589054	BABAM1	Q9NWV8	329 aa		28.04	■■■□□ 2.08
NEDD4L-225	ENST00000589054	IBTK	Q9P2D0	1353 aa	Predicted RBP	28.03	■■■□□ 2.08
NEDD4L-225	ENST00000589054	CHL1	O00533	1208 aa		28.03	■■■□□ 2.08
NEDD4L-225	ENST00000589054	L3MBTL3	Q96JM7	780 aa	Predicted RBP	28.03	■■■□□ 2.08
NEDD4L-225	ENST00000589054	ADAMTS8	Q9UP79	889 aa		28.03	■■■□□ 2.08
NEDD4L-225	ENST00000589054	COL4A5	P29400	1685 aa		28.03	■■■□□ 2.08
NEDD4L-225	ENST00000589054	IARS	P41252	1262 aa	Known RBP	28.02	■■■□□ 2.08
NEDD4L-225	ENST00000589054	RIC1	Q4ADV7	1423 aa		28.01	■■■□□ 2.08
NEDD4L-225	ENST00000589054	CHADL	Q6NUI6	762 aa		28.01	■■■□□ 2.07
NEDD4L-225	ENST00000589054	COPS6	Q7L5N1	327 aa		28.01	■■■□□ 2.07
NEDD4L-225	ENST00000589054	TAF1D	Q9H5J8	278 aa	Predicted RBP	28.01	■■■□□ 2.07
NEDD4L-225	ENST00000589054	FZD9	O00144	591 aa		28	■■■□□ 2.07
NEDD4L-225	ENST00000589054	XAGE3	Q8WTP9	111 aa		28	■■■□□ 2.07
NEDD4L-225	ENST00000589054	TCERG1	O14776	1098 aa	Known RBP	27.99	■■■□□ 2.07
NEDD4L-225	ENST00000589054	RUNDC1	Q96C34	613 aa		27.99	■■■□□ 2.07
NEDD4L-225	ENST00000589054	PSMD1	Q99460	953 aa		27.99	■■■□□ 2.07
NEDD4L-225	ENST00000589054	LMOD3	Q0VAK6	560 aa		27.98	■■■□□ 2.07
NEDD4L-225	ENST00000589054	AIMP1	Q12904	312 aa	Known RBP	27.98	■■■□□ 2.07
NEDD4L-225	ENST00000589054	SLC10A5	Q5PT55	438 aa		27.98	■■■□□ 2.07
NEDD4L-225	ENST00000589054	RPGR	Q92834	1020 aa	Known RBP	27.98	■■■□□ 2.07
NEDD4L-225	ENST00000589054	ZNF428	Q96B54	188 aa		27.98	■■■□□ 2.07
NEDD4L-225	ENST00000589054	CRAMP1	Q96RY5	1269 aa		27.98	■■■□□ 2.07
NEDD4L-225	ENST00000589054	PARP10	Q53GL7	1025 aa		27.97	■■■□□ 2.07
NEDD4L-225	ENST00000589054	LAS1L	Q9Y4W2	734 aa	Known RBP	27.97	■■■□□ 2.07
NEDD4L-225	ENST00000589054	PPP1R42	Q7Z4L9	355 aa		27.96	■■■□□ 2.07
NEDD4L-225	ENST00000589054	UTP14A	Q9BVJ6	771 aa	Known RBP	27.96	■■■□□ 2.07
NEDD4L-225	ENST00000589054	NLRP10	Q86W26	655 aa		27.95	■■■□□ 2.06
NEDD4L-225	ENST00000589054	RBM17	Q96I25	401 aa	Known RBP	27.95	■■■□□ 2.06
NEDD4L-225	ENST00000589054	COL13A1	Q5TAT6	717 aa	Predicted RBP	27.94	■■■□□ 2.06
NEDD4L-225	ENST00000589054	PRKRIP1	Q9H875	184 aa	Predicted RBP	27.94	■■■□□ 2.06
NEDD4L-225	ENST00000589054	DDX21	Q9NR30	783 aa	Known RBP eCLIP	27.94	■■■□□ 2.06
NEDD4L-225	ENST00000589054	CHPF2	Q9P2E5	772 aa		27.94	■■■□□ 2.06
NEDD4L-225	ENST00000589054	RNF123	Q5XPI4	1314 aa		27.93	■■■□□ 2.06
NEDD4L-225	ENST00000589054	PASK	Q96RG2	1323 aa		27.93	■■■□□ 2.06
NEDD4L-225	ENST00000589054	IQCA1L	A6NCM1	817 aa		27.93	■■■□□ 2.06
NEDD4L-225	ENST00000589054	PPEF1	O14829	653 aa	Predicted RBP	27.93	■■■□□ 2.06
NEDD4L-225	ENST00000589054	HCLS1	P14317	486 aa	Predicted RBP	27.93	■■■□□ 2.06
NEDD4L-225	ENST00000589054	CC2D2B	Q6DHV5	1058 aa		27.93	■■■□□ 2.06
NEDD4L-225	ENST00000589054	ITGBL1	O95965	494 aa	Predicted RBP	27.92	■■■□□ 2.06
NEDD4L-225	ENST00000589054	TCIRG1	Q13488	830 aa		27.92	■■■□□ 2.06
NEDD4L-225	ENST00000589054	WDR43	Q15061	677 aa	Known RBP eCLIP	27.92	■■■□□ 2.06
NEDD4L-225	ENST00000589054	LDHD	Q86WU2	507 aa		27.92	■■■□□ 2.06
NEDD4L-225	ENST00000589054	NLRP3	Q96P20	1036 aa		27.92	■■■□□ 2.06
NEDD4L-225	ENST00000589054	EAPP	Q56P03	285 aa	Predicted RBP	27.91	■■■□□ 2.06
NEDD4L-225	ENST00000589054	HACL1	Q9UJ83	578 aa		27.91	■■■□□ 2.06
NEDD4L-225	ENST00000589054	EPHX2	P34913	555 aa		27.9	■■■□□ 2.06
NEDD4L-225	ENST00000589054	ABCC4	O15439	1325 aa		27.9	■■■□□ 2.06
NEDD4L-225	ENST00000589054	GPC2	Q8N158	579 aa		27.89	■■■□□ 2.06
NEDD4L-225	ENST00000589054	CREBZF	Q9NS37	354 aa		27.89	■■■□□ 2.06
NEDD4L-225	ENST00000589054	SCN4A	P35499	1836 aa		27.88	■■■□□ 2.05
NEDD4L-225	ENST00000589054	JDP2	Q8WYK2	163 aa		27.88	■■■□□ 2.05
NEDD4L-225	ENST00000589054	MKRN1	Q9UHC7	482 aa	Known RBP	27.88	■■■□□ 2.05
NEDD4L-225	ENST00000589054	ATP6V0A2	Q9Y487	856 aa		27.88	■■■□□ 2.05
NEDD4L-225	ENST00000589054	LARGE2	Q8N3Y3	721 aa		27.87	■■■□□ 2.05
NEDD4L-225	ENST00000589054	GJA3	Q9Y6H8	435 aa		27.87	■■■□□ 2.05
NEDD4L-225	ENST00000589054	ADAMTSL1	Q8N6G6	1762 aa		27.86	■■■□□ 2.05
NEDD4L-225	ENST00000589054	ZNF853	P0CG23	659 aa		27.86	■■■□□ 2.05
NEDD4L-225	ENST00000589054	HDGFL1	Q5TGJ6	251 aa		27.86	■■■□□ 2.05
NEDD4L-225	ENST00000589054	CFAP44	Q96MT7	982 aa		27.86	■■■□□ 2.05
NEDD4L-225	ENST00000589054	MBIP	Q9NS73	344 aa		27.86	■■■□□ 2.05
NEDD4L-225	ENST00000589054	TRMT112	Q9UI30	125 aa	Known RBP	27.86	■■■□□ 2.05
NEDD4L-225	ENST00000589054	LTBP1	Q14766	1721 aa		27.86	■■■□□ 2.05
NEDD4L-225	ENST00000589054	HSPA1A	P0DMV8	641 aa	Known RBP	27.85	■■■□□ 2.05
NEDD4L-225	ENST00000589054	HSPA1B	P0DMV9	641 aa	Known RBP	27.85	■■■□□ 2.05
NEDD4L-225	ENST00000589054	SCNN1D	P51172	638 aa		27.85	■■■□□ 2.05
NEDD4L-225	ENST00000589054	HSP90AB3P	Q58FF7	597 aa		27.85	■■■□□ 2.05
NEDD4L-225	ENST00000589054	DUSP27	Q5VZP5	1158 aa		27.85	■■■□□ 2.05
NEDD4L-225	ENST00000589054	MAP1S	Q66K74	1059 aa	Predicted RBP	27.85	■■■□□ 2.05
NEDD4L-225	ENST00000589054	APAF1	O14727	1248 aa		27.84	■■■□□ 2.05
NEDD4L-225	ENST00000589054	EPS15	P42566	896 aa		27.84	■■■□□ 2.05
NEDD4L-225	ENST00000589054	AOC3	Q16853	763 aa		27.84	■■■□□ 2.05
NEDD4L-225	ENST00000589054	CLEC11A	Q9Y240	323 aa		27.84	■■■□□ 2.05
NEDD4L-225	ENST00000589054	EIF6	P56537	245 aa	Known RBP	27.83	■■■□□ 2.05
NEDD4L-225	ENST00000589054	PLBD2	Q8NHP8	589 aa		27.83	■■■□□ 2.05
NEDD4L-225	ENST00000589054	ISCA1	Q9BUE6	129 aa		27.83	■■■□□ 2.05
NEDD4L-225	ENST00000589054	ATP5J2-PTCD1	G3V325	749 aa		27.82	■■■□□ 2.04
NEDD4L-225	ENST00000589054	FMR1	Q06787	632 aa	Known RBP eCLIP	27.82	■■■□□ 2.04
NEDD4L-225	ENST00000589054	GRIPAP1	Q4V328	841 aa		27.82	■■■□□ 2.04
NEDD4L-225	ENST00000589054	ANKRD13D	Q6ZTN6	518 aa		27.82	■■■□□ 2.04
NEDD4L-225	ENST00000589054	SH3TC1	Q8TE82	1336 aa		27.82	■■■□□ 2.04
NEDD4L-225	ENST00000589054	PPIP5K2	O43314	1243 aa		27.81	■■■□□ 2.04
NEDD4L-225	ENST00000589054	HOXB7	P09629	217 aa		27.81	■■■□□ 2.04
NEDD4L-225	ENST00000589054	CCDC184	Q52MB2	194 aa		27.81	■■■□□ 2.04
NEDD4L-225	ENST00000589054	CNTROB	Q8N137	903 aa		27.81	■■■□□ 2.04
NEDD4L-225	ENST00000589054	RTFDC1	Q9BY42	306 aa	Predicted RBP	27.81	■■■□□ 2.04
NEDD4L-225	ENST00000589054	LAMB2	P55268	1798 aa		27.81	■■■□□ 2.04
NEDD4L-225	ENST00000589054	ANKRD36C	Q5JPF3	1778 aa		27.81	■■■□□ 2.04
NEDD4L-225	ENST00000589054	BBOX1	O75936	387 aa		27.8	■■■□□ 2.04
NEDD4L-225	ENST00000589054	SP8	Q8IXZ3	490 aa		27.8	■■■□□ 2.04
NEDD4L-225	ENST00000589054	FAM89A	Q96GI7	184 aa		27.8	■■■□□ 2.04
NEDD4L-225	ENST00000589054	DBF4	Q9UBU7	674 aa	Predicted RBP	27.8	■■■□□ 2.04
NEDD4L-225	ENST00000589054	COL4A1	P02462	1669 aa		27.79	■■■□□ 2.04
NEDD4L-225	ENST00000589054	CNTNAP1	P78357	1384 aa		27.79	■■■□□ 2.04
NEDD4L-225	ENST00000589054	PNMA8A	Q86V59	439 aa	Predicted RBP	27.79	■■■□□ 2.04
NEDD4L-225	ENST00000589054	ELL2	O00472	640 aa	Predicted RBP	27.78	■■■□□ 2.04
NEDD4L-225	ENST00000589054	GRAP	Q13588	217 aa		27.78	■■■□□ 2.04
NEDD4L-225	ENST00000589054	NIM1K	Q8IY84	436 aa		27.78	■■■□□ 2.04
NEDD4L-225	ENST00000589054	GRAPL	Q8TC17	118 aa	Predicted RBP	27.78	■■■□□ 2.04
NEDD4L-225	ENST00000589054	PHAX	Q9H814	394 aa	Known RBP	27.78	■■■□□ 2.04
NEDD4L-225	ENST00000589054	TMEM88B	A6NKF7	163 aa		27.77	■■■□□ 2.04

Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms