RNA–Protein interactions for RNA: ENST00000588275.2

LINC01842-201, Transcript of long intergenic non-protein coding RNA 1842, humanhuman

TSL 1 (best) BASIC

Gene LINC01842, Length 768 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01842-201ENST00000588275 JDP2Q8WYK2 163 aa22.1■■□□□ 1.13
LINC01842-201ENST00000588275 ERBB4Q15303 1308 aa22.09■■□□□ 1.13
LINC01842-201ENST00000588275 EPHX2P34913 555 aa22.09■■□□□ 1.13
LINC01842-201ENST00000588275 GIGYF2Q6Y7W6 1299 aaKnown RBP22.09■■□□□ 1.13
LINC01842-201ENST00000588275 PSMD1Q99460 953 aa22.09■■□□□ 1.13
LINC01842-201ENST00000588275 RIC1Q4ADV7 1423 aa22.08■■□□□ 1.13
LINC01842-201ENST00000588275 NTSR2O95665 410 aa22.08■■□□□ 1.13
LINC01842-201ENST00000588275 ANXA1P04083 346 aa22.08■■□□□ 1.13
LINC01842-201ENST00000588275 ZNF34Q8IZ26 560 aa22.08■■□□□ 1.13
LINC01842-201ENST00000588275 RBM17Q96I25 401 aaKnown RBP22.08■■□□□ 1.13
LINC01842-201ENST00000588275 GJA3Q9Y6H8 435 aa22.08■■□□□ 1.13
LINC01842-201ENST00000588275 SNED1Q8TER0 1413 aa22.07■■□□□ 1.12
LINC01842-201ENST00000588275 FZD9O00144 591 aa22.07■■□□□ 1.12
LINC01842-201ENST00000588275 PPEF1O14829 653 aaPredicted RBP22.07■■□□□ 1.12
LINC01842-201ENST00000588275 CC2D2BQ6DHV5 1058 aa22.07■■□□□ 1.12
LINC01842-201ENST00000588275 PPP1R42Q7Z4L9 355 aa22.07■■□□□ 1.12
LINC01842-201ENST00000588275 SLC51AQ86UW1 340 aa22.07■■□□□ 1.12
LINC01842-201ENST00000588275 NECTIN2Q92692 538 aa22.07■■□□□ 1.12
LINC01842-201ENST00000588275 PASKQ96RG2 1323 aa22.06■■□□□ 1.12
LINC01842-201ENST00000588275 HOXA10P31260 410 aaPredicted RBP22.06■■□□□ 1.12
LINC01842-201ENST00000588275 EIF6P56537 245 aaKnown RBP22.06■■□□□ 1.12
LINC01842-201ENST00000588275 RALBP1Q15311 655 aa22.06■■□□□ 1.12
LINC01842-201ENST00000588275 PROSER3Q2NL68 480 aa22.06■■□□□ 1.12
LINC01842-201ENST00000588275 C3orf67Q6ZVT6 689 aa22.06■■□□□ 1.12
LINC01842-201ENST00000588275 GPC2Q8N158 579 aa22.06■■□□□ 1.12
LINC01842-201ENST00000588275 LMOD3Q0VAK6 560 aa22.05■■□□□ 1.12
LINC01842-201ENST00000588275 NEUROD2Q15784 382 aa22.05■■□□□ 1.12
LINC01842-201ENST00000588275 PARP10Q53GL7 1025 aa22.05■■□□□ 1.12
LINC01842-201ENST00000588275 LARGE2Q8N3Y3 721 aa22.05■■□□□ 1.12
LINC01842-201ENST00000588275 COL4A5P29400 1685 aa22.04■■□□□ 1.12
LINC01842-201ENST00000588275 CNTNAP1P78357 1384 aa22.04■■□□□ 1.12
LINC01842-201ENST00000588275 TMPOP42166 694 aaKnown RBP22.04■■□□□ 1.12
LINC01842-201ENST00000588275 AIMP1Q12904 312 aaKnown RBP22.04■■□□□ 1.12
LINC01842-201ENST00000588275 MAP1SQ66K74 1059 aaPredicted RBP22.04■■□□□ 1.12
LINC01842-201ENST00000588275 PNMA8AQ86V59 439 aaPredicted RBP22.04■■□□□ 1.12
LINC01842-201ENST00000588275 CCDC146Q8IYE0 955 aa22.04■■□□□ 1.12
LINC01842-201ENST00000588275 NLRP3Q96P20 1036 aa22.04■■□□□ 1.12
LINC01842-201ENST00000588275 CRAMP1Q96RY5 1269 aa22.04■■□□□ 1.12
LINC01842-201ENST00000588275 UTP14AQ9BVJ6 771 aaKnown RBP22.04■■□□□ 1.12
LINC01842-201ENST00000588275 ADAMTSL1Q8N6G6 1762 aa22.04■■□□□ 1.12
LINC01842-201ENST00000588275 TMEM88BA6NKF7 163 aa22.03■■□□□ 1.12
LINC01842-201ENST00000588275 PDIA6Q15084 440 aa22.03■■□□□ 1.12
LINC01842-201ENST00000588275 TMX4Q9H1E5 349 aaPredicted RBP22.03■■□□□ 1.12
LINC01842-201ENST00000588275 ANKRD36CQ5JPF3 1778 aa22.02■■□□□ 1.12
LINC01842-201ENST00000588275 ITGBL1O95965 494 aaPredicted RBP22.02■■□□□ 1.12
LINC01842-201ENST00000588275 LMOD1P29536 600 aaPredicted RBP22.02■■□□□ 1.12
LINC01842-201ENST00000588275 LRP10Q7Z4F1 713 aa22.02■■□□□ 1.12
LINC01842-201ENST00000588275 GRIPAP1Q4V328 841 aa22.01■■□□□ 1.11
LINC01842-201ENST00000588275 CNTROBQ8N137 903 aa22.01■■□□□ 1.11
LINC01842-201ENST00000588275 LAS1LQ9Y4W2 734 aaKnown RBP22.01■■□□□ 1.11
LINC01842-201ENST00000588275 PPIP5K2O43314 1243 aa22■■□□□ 1.11
LINC01842-201ENST00000588275 DDX10Q13206 875 aaKnown RBP22■■□□□ 1.11
LINC01842-201ENST00000588275 COPS6Q7L5N1 327 aa22■■□□□ 1.11
LINC01842-201ENST00000588275 NIM1KQ8IY84 436 aa22■■□□□ 1.11
LINC01842-201ENST00000588275 XAGE3Q8WTP9 111 aa22■■□□□ 1.11
LINC01842-201ENST00000588275 BABAM1Q9NWV8 329 aa22■■□□□ 1.11
LINC01842-201ENST00000588275 LTBP1Q14766 1721 aa22■■□□□ 1.11
LINC01842-201ENST00000588275 ABCC4O15439 1325 aa21.99■■□□□ 1.11
LINC01842-201ENST00000588275 MYBBP1AQ9BQG0 1328 aaKnown RBP21.99■■□□□ 1.11
LINC01842-201ENST00000588275 LAMB2P55268 1798 aa21.99■■□□□ 1.11
LINC01842-201ENST00000588275 VEGFBP49765 207 aa21.98■■□□□ 1.11
LINC01842-201ENST00000588275 AOC3Q16853 763 aa21.98■■□□□ 1.11
LINC01842-201ENST00000588275 KRT24Q2M2I5 525 aa21.98■■□□□ 1.11
LINC01842-201ENST00000588275 HSP90AB3PQ58FF7 597 aa21.98■■□□□ 1.11
LINC01842-201ENST00000588275 ZNF428Q96B54 188 aa21.98■■□□□ 1.11
LINC01842-201ENST00000588275 HCLS1P14317 486 aaPredicted RBP21.97■■□□□ 1.11
LINC01842-201ENST00000588275 WDR43Q15061 677 aaKnown RBP eCLIP21.97■■□□□ 1.11
LINC01842-201ENST00000588275 ATP6V0A2Q9Y487 856 aa21.97■■□□□ 1.11
LINC01842-201ENST00000588275 EPS15P42566 896 aa21.96■■□□□ 1.11
LINC01842-201ENST00000588275 SCNN1DP51172 638 aa21.96■■□□□ 1.11
LINC01842-201ENST00000588275 SLC10A5Q5PT55 438 aa21.96■■□□□ 1.11
LINC01842-201ENST00000588275 NLRP10Q86W26 655 aa21.96■■□□□ 1.11
LINC01842-201ENST00000588275 AIDAQ96BJ3 306 aa21.96■■□□□ 1.11
LINC01842-201ENST00000588275 TRMT112Q9UI30 125 aaKnown RBP21.96■■□□□ 1.11
LINC01842-201ENST00000588275 ABT1Q9ULW3 272 aaKnown RBP21.96■■□□□ 1.11
LINC01842-201ENST00000588275 FOXN1O15353 648 aa21.95■■□□□ 1.1
LINC01842-201ENST00000588275 DPP8Q6V1X1 898 aaPredicted RBP21.94■■□□□ 1.1
LINC01842-201ENST00000588275 RUNDC1Q96C34 613 aa21.94■■□□□ 1.1
LINC01842-201ENST00000588275 DDX21Q9NR30 783 aaKnown RBP eCLIP21.94■■□□□ 1.1
LINC01842-201ENST00000588275 CHPF2Q9P2E5 772 aa21.94■■□□□ 1.1
LINC01842-201ENST00000588275 TCIRG1Q13488 830 aa21.93■■□□□ 1.1
LINC01842-201ENST00000588275 HDGFL1Q5TGJ6 251 aa21.93■■□□□ 1.1
LINC01842-201ENST00000588275 DDX46Q7L014 1031 aaKnown RBP21.93■■□□□ 1.1
LINC01842-201ENST00000588275 SUPT20HQ8NEM7 779 aa21.93■■□□□ 1.1
LINC01842-201ENST00000588275 SH3TC1Q8TE82 1336 aa21.93■■□□□ 1.1
LINC01842-201ENST00000588275 CHL1O00533 1208 aa21.92■■□□□ 1.1
LINC01842-201ENST00000588275 DEFB115Q30KQ5 88 aa21.92■■□□□ 1.1
LINC01842-201ENST00000588275 TRIM35Q9UPQ4 493 aa21.92■■□□□ 1.1
LINC01842-201ENST00000588275 BBOX1O75936 387 aa21.91■■□□□ 1.1
LINC01842-201ENST00000588275 FMR1Q06787 632 aaKnown RBP eCLIP21.91■■□□□ 1.1
LINC01842-201ENST00000588275 PAXIP1Q6ZW49 1069 aaPredicted RBP21.91■■□□□ 1.1
LINC01842-201ENST00000588275 USP50Q70EL3 339 aaPredicted RBP21.91■■□□□ 1.1
LINC01842-201ENST00000588275 MPNDQ8N594 471 aa21.91■■□□□ 1.1
LINC01842-201ENST00000588275 TAF1P21675 1872 aa21.91■■□□□ 1.1
LINC01842-201ENST00000588275 RASSF10A6NK89 507 aa21.9■■□□□ 1.1
LINC01842-201ENST00000588275 SP8Q8IXZ3 490 aa21.9■■□□□ 1.1
LINC01842-201ENST00000588275 ZNRF3Q9ULT6 936 aa21.9■■□□□ 1.1
LINC01842-201ENST00000588275 CTCFP49711 727 aaPredicted RBP21.89■■□□□ 1.09
LINC01842-201ENST00000588275 CXCL9Q07325 125 aa21.89■■□□□ 1.09
LINC01842-201ENST00000588275 GRM1Q13255 1194 aa21.89■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms