RNA–Protein interactions for RNA: ENST00000586963.1

CAPNS1-203, Transcript of calpain small subunit 1, humanhuman

TSL 2

Gene CAPNS1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-203ENST00000586963 CNTNAP1P78357 1384 aa10.58□□□□□ -0.72
CAPNS1-203ENST00000586963 TMEM88BA6NKF7 163 aa10.58□□□□□ -0.72
CAPNS1-203ENST00000586963 PARP10Q53GL7 1025 aa10.58□□□□□ -0.72
CAPNS1-203ENST00000586963 EAPPQ56P03 285 aaPredicted RBP10.58□□□□□ -0.72
CAPNS1-203ENST00000586963 PPP1R42Q7Z4L9 355 aa10.58□□□□□ -0.72
CAPNS1-203ENST00000586963 RBM17Q96I25 401 aaKnown RBP10.58□□□□□ -0.72
CAPNS1-203ENST00000586963 CRAMP1Q96RY5 1269 aa10.58□□□□□ -0.72
CAPNS1-203ENST00000586963 ZBTB3Q9H5J0 574 aa10.58□□□□□ -0.72
CAPNS1-203ENST00000586963 BABAM1Q9NWV8 329 aa10.58□□□□□ -0.72
CAPNS1-203ENST00000586963 SCN4AP35499 1836 aa10.57□□□□□ -0.72
CAPNS1-203ENST00000586963 NTSR2O95665 410 aa10.57□□□□□ -0.72
CAPNS1-203ENST00000586963 GPTP24298 496 aa10.57□□□□□ -0.72
CAPNS1-203ENST00000586963 EIF6P56537 245 aaKnown RBP10.57□□□□□ -0.72
CAPNS1-203ENST00000586963 LRP10Q7Z4F1 713 aa10.57□□□□□ -0.72
CAPNS1-203ENST00000586963 TSPYL4Q9UJ04 414 aa10.57□□□□□ -0.72
CAPNS1-203ENST00000586963 CLEC11AQ9Y240 323 aa10.57□□□□□ -0.72
CAPNS1-203ENST00000586963 RIPK4P57078 832 aa10.56□□□□□ -0.72
CAPNS1-203ENST00000586963 PDIA6Q15084 440 aa10.56□□□□□ -0.72
CAPNS1-203ENST00000586963 SLC10A5Q5PT55 438 aa10.56□□□□□ -0.72
CAPNS1-203ENST00000586963 CNTROBQ8N137 903 aa10.56□□□□□ -0.72
CAPNS1-203ENST00000586963 NLRP3Q96P20 1036 aa10.56□□□□□ -0.72
CAPNS1-203ENST00000586963 VPS33BQ9H267 617 aa10.56□□□□□ -0.72
CAPNS1-203ENST00000586963 RNF123Q5XPI4 1314 aa10.56□□□□□ -0.72
CAPNS1-203ENST00000586963 CACNA1SQ13698 1873 aa10.55□□□□□ -0.72
CAPNS1-203ENST00000586963 LAMB4A4D0S4 1761 aa10.55□□□□□ -0.72
CAPNS1-203ENST00000586963 KDM3BQ7LBC6 1761 aa10.55□□□□□ -0.72
CAPNS1-203ENST00000586963 PPEF1O14829 653 aaPredicted RBP10.55□□□□□ -0.72
CAPNS1-203ENST00000586963 LMOD3Q0VAK6 560 aa10.55□□□□□ -0.72
CAPNS1-203ENST00000586963 RALBP1Q15311 655 aa10.55□□□□□ -0.72
CAPNS1-203ENST00000586963 LARGE2Q8N3Y3 721 aa10.55□□□□□ -0.72
CAPNS1-203ENST00000586963 UTP14AQ9BVJ6 771 aaKnown RBP10.55□□□□□ -0.72
CAPNS1-203ENST00000586963 RASSF10A6NK89 507 aa10.54□□□□□ -0.72
CAPNS1-203ENST00000586963 EIF2S2P20042 333 aaKnown RBP10.54□□□□□ -0.72
CAPNS1-203ENST00000586963 LMOD1P29536 600 aaPredicted RBP10.54□□□□□ -0.72
CAPNS1-203ENST00000586963 TMPOP42166 694 aaKnown RBP10.54□□□□□ -0.72
CAPNS1-203ENST00000586963 VEGFBP49765 207 aa10.54□□□□□ -0.72
CAPNS1-203ENST00000586963 MAP1SQ66K74 1059 aaPredicted RBP10.54□□□□□ -0.72
CAPNS1-203ENST00000586963 C3orf67Q6ZVT6 689 aa10.54□□□□□ -0.72
CAPNS1-203ENST00000586963 TMX4Q9H1E5 349 aaPredicted RBP10.54□□□□□ -0.72
CAPNS1-203ENST00000586963 PRDM10Q9NQV6 1147 aa10.54□□□□□ -0.72
CAPNS1-203ENST00000586963 ATP6V0A2Q9Y487 856 aa10.54□□□□□ -0.72
CAPNS1-203ENST00000586963 GJA3Q9Y6H8 435 aa10.54□□□□□ -0.72
CAPNS1-203ENST00000586963 FOXN1O15353 648 aa10.53□□□□□ -0.72
CAPNS1-203ENST00000586963 CAPN15O75808 1086 aa10.53□□□□□ -0.72
CAPNS1-203ENST00000586963 BBOX1O75936 387 aa10.53□□□□□ -0.72
CAPNS1-203ENST00000586963 SCNN1DP51172 638 aa10.53□□□□□ -0.72
CAPNS1-203ENST00000586963 DEFB115Q30KQ5 88 aa10.53□□□□□ -0.72
CAPNS1-203ENST00000586963 HSP90AB3PQ58FF7 597 aa10.53□□□□□ -0.72
CAPNS1-203ENST00000586963 USP50Q70EL3 339 aaPredicted RBP10.53□□□□□ -0.72
CAPNS1-203ENST00000586963 NIM1KQ8IY84 436 aa10.53□□□□□ -0.72
CAPNS1-203ENST00000586963 RTFDC1Q9BY42 306 aaPredicted RBP10.53□□□□□ -0.72
CAPNS1-203ENST00000586963 WBP1LQ9NX94 342 aa10.53□□□□□ -0.72
CAPNS1-203ENST00000586963 NUP98P52948 1817 aa10.53□□□□□ -0.72
CAPNS1-203ENST00000586963 DLG5Q8TDM6 1919 aa10.52□□□□□ -0.72
CAPNS1-203ENST00000586963 ADAMTSL1Q8N6G6 1762 aa10.52□□□□□ -0.72
CAPNS1-203ENST00000586963 TCERG1O14776 1098 aaKnown RBP10.52□□□□□ -0.73
CAPNS1-203ENST00000586963 PPIP5K2O43314 1243 aa10.52□□□□□ -0.73
CAPNS1-203ENST00000586963 EPS15P42566 896 aa10.52□□□□□ -0.73
CAPNS1-203ENST00000586963 CTCFP49711 727 aaPredicted RBP10.52□□□□□ -0.73
CAPNS1-203ENST00000586963 PROSER3Q2NL68 480 aa10.52□□□□□ -0.73
CAPNS1-203ENST00000586963 COPS6Q7L5N1 327 aa10.52□□□□□ -0.73
CAPNS1-203ENST00000586963 SUPT20HQ8NEM7 779 aa10.52□□□□□ -0.73
CAPNS1-203ENST00000586963 AIDAQ96BJ3 306 aa10.52□□□□□ -0.73
CAPNS1-203ENST00000586963 DDX21Q9NR30 783 aaKnown RBP eCLIP10.52□□□□□ -0.73
CAPNS1-203ENST00000586963 COL4A5P29400 1685 aa10.52□□□□□ -0.73
CAPNS1-203ENST00000586963 CHL1O00533 1208 aa10.51□□□□□ -0.73
CAPNS1-203ENST00000586963 ANXA1P04083 346 aa10.51□□□□□ -0.73
CAPNS1-203ENST00000586963 TCIRG1Q13488 830 aa10.51□□□□□ -0.73
CAPNS1-203ENST00000586963 AOC3Q16853 763 aa10.51□□□□□ -0.73
CAPNS1-203ENST00000586963 NLRP10Q86W26 655 aa10.51□□□□□ -0.73
CAPNS1-203ENST00000586963 SP8Q8IXZ3 490 aa10.51□□□□□ -0.73
CAPNS1-203ENST00000586963 XAGE3Q8WTP9 111 aa10.51□□□□□ -0.73
CAPNS1-203ENST00000586963 ZNRF3Q9ULT6 936 aa10.51□□□□□ -0.73
CAPNS1-203ENST00000586963 ABCC4O15439 1325 aa10.51□□□□□ -0.73
CAPNS1-203ENST00000586963 MAP2K1Q02750 393 aaPredicted RBP10.5□□□□□ -0.73
CAPNS1-203ENST00000586963 AIMP1Q12904 312 aaKnown RBP10.5□□□□□ -0.73
CAPNS1-203ENST00000586963 DPP8Q6V1X1 898 aaPredicted RBP10.5□□□□□ -0.73
CAPNS1-203ENST00000586963 SLC51AQ86UW1 340 aa10.5□□□□□ -0.73
CAPNS1-203ENST00000586963 ADARB2Q9NS39 739 aaKnown RBP10.5□□□□□ -0.73
CAPNS1-203ENST00000586963 GPRC5DQ9NZD1 345 aa10.5□□□□□ -0.73
CAPNS1-203ENST00000586963 SH3TC1Q8TE82 1336 aa10.5□□□□□ -0.73
CAPNS1-203ENST00000586963 WDR33Q9C0J8 1336 aaKnown RBP10.5□□□□□ -0.73
CAPNS1-203ENST00000586963 HOXB7P09629 217 aa10.49□□□□□ -0.73
CAPNS1-203ENST00000586963 HCLS1P14317 486 aaPredicted RBP10.49□□□□□ -0.73
CAPNS1-203ENST00000586963 CXCL9Q07325 125 aa10.49□□□□□ -0.73
CAPNS1-203ENST00000586963 KIAA2012Q0VF49 1180 aa10.49□□□□□ -0.73
CAPNS1-203ENST00000586963 GRAPQ13588 217 aa10.49□□□□□ -0.73
CAPNS1-203ENST00000586963 DDX46Q7L014 1031 aaKnown RBP10.49□□□□□ -0.73
CAPNS1-203ENST00000586963 TMC4Q7Z404 712 aa10.49□□□□□ -0.73
CAPNS1-203ENST00000586963 MPNDQ8N594 471 aa10.49□□□□□ -0.73
CAPNS1-203ENST00000586963 GRAPLQ8TC17 118 aaPredicted RBP10.49□□□□□ -0.73
CAPNS1-203ENST00000586963 NECTIN2Q92692 538 aa10.49□□□□□ -0.73
CAPNS1-203ENST00000586963 TRMT112Q9UI30 125 aaKnown RBP10.49□□□□□ -0.73
CAPNS1-203ENST00000586963 ABT1Q9ULW3 272 aaKnown RBP10.49□□□□□ -0.73
CAPNS1-203ENST00000586963 ECE1P42892 770 aa10.48□□□□□ -0.73
CAPNS1-203ENST00000586963 TNIP1Q15025 636 aa10.48□□□□□ -0.73
CAPNS1-203ENST00000586963 NEUROD2Q15784 382 aa10.48□□□□□ -0.73
CAPNS1-203ENST00000586963 CST9Q5W186 159 aa10.48□□□□□ -0.73
CAPNS1-203ENST00000586963 CIAPIN1Q6FI81 312 aa10.48□□□□□ -0.73
CAPNS1-203ENST00000586963 PLBD2Q8NHP8 589 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 110.7 ms