RNA–Protein interactions for RNA: ENST00000586253.1

SMAD4-204, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 784 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-204ENST00000586253 MYH14Q7Z406 1995 aaKnown RBP10.45□□□□□ -0.74
SMAD4-204ENST00000586253 IL16Q14005 1332 aa10.45□□□□□ -0.74
SMAD4-204ENST00000586253 PNPLA7Q6ZV29 1317 aa10.45□□□□□ -0.74
SMAD4-204ENST00000586253 STARD3NLO95772 234 aa10.45□□□□□ -0.74
SMAD4-204ENST00000586253 SNRPA1P09661 255 aaKnown RBP10.45□□□□□ -0.74
SMAD4-204ENST00000586253 ZNF853P0CG23 659 aa10.45□□□□□ -0.74
SMAD4-204ENST00000586253 SSFA2P28290 1259 aa10.45□□□□□ -0.74
SMAD4-204ENST00000586253 SLC4A5Q9BY07 1137 aa10.45□□□□□ -0.74
SMAD4-204ENST00000586253 BCL2L12Q9HB09 334 aa10.45□□□□□ -0.74
SMAD4-204ENST00000586253 MIS18AQ9NYP9 233 aa10.45□□□□□ -0.74
SMAD4-204ENST00000586253 LAMB4A4D0S4 1761 aa10.44□□□□□ -0.74
SMAD4-204ENST00000586253 CYP19A1P11511 503 aaPredicted RBP10.44□□□□□ -0.74
SMAD4-204ENST00000586253 CRKLP46109 303 aaKnown RBP10.44□□□□□ -0.74
SMAD4-204ENST00000586253 EIF4A1P60842 406 aaKnown RBP10.44□□□□□ -0.74
SMAD4-204ENST00000586253 GNAI1P63096 354 aa10.44□□□□□ -0.74
SMAD4-204ENST00000586253 SLC16A10Q8TF71 515 aa10.44□□□□□ -0.74
SMAD4-204ENST00000586253 RTCBQ9Y3I0 505 aaKnown RBP10.44□□□□□ -0.74
SMAD4-204ENST00000586253 BHMG1C9JSJ3 638 aaPredicted RBP10.43□□□□□ -0.74
SMAD4-204ENST00000586253 GNPATO15228 680 aa10.43□□□□□ -0.74
SMAD4-204ENST00000586253 GIGYF1O75420 1035 aaPredicted RBP10.43□□□□□ -0.74
SMAD4-204ENST00000586253 RPS6KA4O75676 772 aa10.43□□□□□ -0.74
SMAD4-204ENST00000586253 INTS5Q6P9B9 1019 aaKnown RBP10.43□□□□□ -0.74
SMAD4-204ENST00000586253 WDR63Q8IWG1 891 aa10.43□□□□□ -0.74
SMAD4-204ENST00000586253 RYDENQ9NUL5 291 aaKnown RBP10.43□□□□□ -0.74
SMAD4-204ENST00000586253 CCDC87Q9NVE4 849 aa10.43□□□□□ -0.74
SMAD4-204ENST00000586253 MBIPQ9NS73 344 aa10.42□□□□□ -0.74
SMAD4-204ENST00000586253 LRP5O75197 1615 aa10.41□□□□□ -0.74
SMAD4-204ENST00000586253 SOS1Q07889 1333 aaPredicted RBP10.41□□□□□ -0.74
SMAD4-204ENST00000586253 ZNF521Q96K83 1311 aa10.41□□□□□ -0.74
SMAD4-204ENST00000586253 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.41□□□□□ -0.74
SMAD4-204ENST00000586253 HOXB7P09629 217 aa10.41□□□□□ -0.74
SMAD4-204ENST00000586253 MFSD10Q14728 455 aa10.41□□□□□ -0.74
SMAD4-204ENST00000586253 TRAPPC3LQ5T215 181 aa10.41□□□□□ -0.74
SMAD4-204ENST00000586253 AMIGO3Q86WK7 504 aa10.41□□□□□ -0.74
SMAD4-204ENST00000586253 COL23A1Q86Y22 540 aaPredicted RBP10.41□□□□□ -0.74
SMAD4-204ENST00000586253 ZNF454Q8N9F8 522 aa10.41□□□□□ -0.74
SMAD4-204ENST00000586253 KCTD12Q96CX2 325 aaKnown RBP10.41□□□□□ -0.74
SMAD4-204ENST00000586253 MTFR1LQ9H019 292 aa10.41□□□□□ -0.74
SMAD4-204ENST00000586253 ZBTB1Q9Y2K1 713 aa10.41□□□□□ -0.74
SMAD4-204ENST00000586253 LAS1LQ9Y4W2 734 aaKnown RBP10.41□□□□□ -0.74
SMAD4-204ENST00000586253 USP16Q9Y5T5 823 aa10.41□□□□□ -0.74
SMAD4-204ENST00000586253 C4AP0C0L4 1744 aa10.41□□□□□ -0.74
SMAD4-204ENST00000586253 COL24A1Q17RW2 1714 aa10.41□□□□□ -0.74
SMAD4-204ENST00000586253 ERBB4Q15303 1308 aa10.4□□□□□ -0.74
SMAD4-204ENST00000586253 PRAMEF22A3QJZ6 481 aa10.4□□□□□ -0.74
SMAD4-204ENST00000586253 PDE4AP27815 886 aa10.4□□□□□ -0.74
SMAD4-204ENST00000586253 IL6STP40189 918 aaPredicted RBP10.4□□□□□ -0.74
SMAD4-204ENST00000586253 PDGFDQ9GZP0 370 aaPredicted RBP10.4□□□□□ -0.74
SMAD4-204ENST00000586253 COL15A1P39059 1388 aa10.39□□□□□ -0.75
SMAD4-204ENST00000586253 A0A087WZG4 1122 aa10.39□□□□□ -0.75
SMAD4-204ENST00000586253 PHF14O94880 888 aa10.39□□□□□ -0.75
SMAD4-204ENST00000586253 EIF5P55010 431 aaKnown RBP10.39□□□□□ -0.75
SMAD4-204ENST00000586253 ARHGEF1Q92888 912 aaKnown RBP10.39□□□□□ -0.75
SMAD4-204ENST00000586253 SPON1Q9HCB6 807 aa10.39□□□□□ -0.75
SMAD4-204ENST00000586253 SALL2Q9Y467 1007 aaPredicted RBP10.39□□□□□ -0.75
SMAD4-204ENST00000586253 SENP3-EIF4A1A0A087X0R7 540 aa10.38□□□□□ -0.75
SMAD4-204ENST00000586253 ZBTB7AO95365 584 aa10.38□□□□□ -0.75
SMAD4-204ENST00000586253 A1BGP04217 495 aa10.38□□□□□ -0.75
SMAD4-204ENST00000586253 CANXP27824 592 aaKnown RBP10.38□□□□□ -0.75
SMAD4-204ENST00000586253 RFC4P35249 363 aa10.38□□□□□ -0.75
SMAD4-204ENST00000586253 ZBED2Q9BTP6 218 aa10.38□□□□□ -0.75
SMAD4-204ENST00000586253 CHMP4AQ9BY43 222 aa10.38□□□□□ -0.75
SMAD4-204ENST00000586253 MYH16Q9H6N6 1097 aa10.38□□□□□ -0.75
SMAD4-204ENST00000586253 USP42Q9H9J4 1324 aaKnown RBP10.37□□□□□ -0.75
SMAD4-204ENST00000586253 FANCIQ9NVI1 1328 aa10.37□□□□□ -0.75
SMAD4-204ENST00000586253 NBPF26B4DH59 902 aa10.37□□□□□ -0.75
SMAD4-204ENST00000586253 EVI5O60447 810 aa10.37□□□□□ -0.75
SMAD4-204ENST00000586253 DUSP27Q5VZP5 1158 aa10.37□□□□□ -0.75
SMAD4-204ENST00000586253 NBPF10Q6P3W6 841 aaKnown RBP10.37□□□□□ -0.75
SMAD4-204ENST00000586253 NPM2Q86SE8 214 aaKnown RBP10.37□□□□□ -0.75
SMAD4-204ENST00000586253 NBPF15Q8N660 670 aa10.37□□□□□ -0.75
SMAD4-204ENST00000586253 EMILIN3Q9NT22 766 aa10.37□□□□□ -0.75
SMAD4-204ENST00000586253 E9PSI1 815 aa10.36□□□□□ -0.75
SMAD4-204ENST00000586253 ZPR1O75312 459 aa10.36□□□□□ -0.75
SMAD4-204ENST00000586253 KRT24Q2M2I5 525 aa10.36□□□□□ -0.75
SMAD4-204ENST00000586253 SMIM5Q71RC9 77 aa10.36□□□□□ -0.75
SMAD4-204ENST00000586253 NLGN1Q8N2Q7 840 aa10.36□□□□□ -0.75
SMAD4-204ENST00000586253 TSR2Q969E8 191 aaKnown RBP10.36□□□□□ -0.75
SMAD4-204ENST00000586253 ADAM33Q9BZ11 813 aa10.36□□□□□ -0.75
SMAD4-204ENST00000586253 NARFQ9UHQ1 456 aa10.36□□□□□ -0.75
SMAD4-204ENST00000586253 SCN7AQ01118 1682 aa10.36□□□□□ -0.75
SMAD4-204ENST00000586253 BCORQ6W2J9 1755 aa10.35□□□□□ -0.75
SMAD4-204ENST00000586253 GYS1P13807 737 aa10.35□□□□□ -0.75
SMAD4-204ENST00000586253 EIF2S2P20042 333 aaKnown RBP10.35□□□□□ -0.75
SMAD4-204ENST00000586253 POLD1P28340 1107 aa10.35□□□□□ -0.75
SMAD4-204ENST00000586253 HDGFL1Q5TGJ6 251 aa10.35□□□□□ -0.75
SMAD4-204ENST00000586253 C8orf58Q8NAV2 365 aa10.35□□□□□ -0.75
SMAD4-204ENST00000586253 LARP6Q9BRS8 491 aaKnown RBP10.35□□□□□ -0.75
SMAD4-204ENST00000586253 SRCAPQ6ZRS2 3230 aa10.34□□□□□ -0.75
SMAD4-204ENST00000586253 PDIA6Q15084 440 aa10.34□□□□□ -0.75
SMAD4-204ENST00000586253 LRP10Q7Z4F1 713 aa10.34□□□□□ -0.75
SMAD4-204ENST00000586253 DDX21Q9NR30 783 aaKnown RBP eCLIP10.34□□□□□ -0.75
SMAD4-204ENST00000586253 ZNF330Q9Y3S2 320 aaPredicted RBP10.34□□□□□ -0.75
SMAD4-204ENST00000586253 PTPREP23469 700 aa10.33□□□□□ -0.76
SMAD4-204ENST00000586253 PIP4K2AP48426 406 aaPredicted RBP10.33□□□□□ -0.76
SMAD4-204ENST00000586253 HNRNPUQ00839 825 aaKnown RBP eCLIP10.33□□□□□ -0.76
SMAD4-204ENST00000586253 SLFN5Q08AF3 891 aa10.33□□□□□ -0.76
SMAD4-204ENST00000586253 TWISTNBQ3B726 338 aaPredicted RBP10.33□□□□□ -0.76
SMAD4-204ENST00000586253 CCDC30Q5VVM6 783 aa10.33□□□□□ -0.76
SMAD4-204ENST00000586253 USPL1Q5W0Q7 1092 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms