RNA–Protein interactions for RNA: ENST00000584952.1

AC055811.3-201, humanhuman

BASIC

Gene AC055811.3, Length 686 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055811.3-201ENST00000584952 SCN4AP35499 1836 aa17.65■□□□□ 0.42
AC055811.3-201ENST00000584952 RIC1Q4ADV7 1423 aa17.65■□□□□ 0.42
AC055811.3-201ENST00000584952 SNED1Q8TER0 1413 aa17.65■□□□□ 0.42
AC055811.3-201ENST00000584952 ITGBL1O95965 494 aaPredicted RBP17.65■□□□□ 0.42
AC055811.3-201ENST00000584952 EPHX2P34913 555 aa17.65■□□□□ 0.42
AC055811.3-201ENST00000584952 RALBP1Q15311 655 aa17.65■□□□□ 0.42
AC055811.3-201ENST00000584952 GRIPAP1Q4V328 841 aa17.65■□□□□ 0.42
AC055811.3-201ENST00000584952 EAPPQ56P03 285 aaPredicted RBP17.65■□□□□ 0.42
AC055811.3-201ENST00000584952 LRP10Q7Z4F1 713 aa17.65■□□□□ 0.42
AC055811.3-201ENST00000584952 JDP2Q8WYK2 163 aa17.65■□□□□ 0.42
AC055811.3-201ENST00000584952 RBM17Q96I25 401 aaKnown RBP17.65■□□□□ 0.42
AC055811.3-201ENST00000584952 NUP98P52948 1817 aa17.65■□□□□ 0.42
AC055811.3-201ENST00000584952 NTSR2O95665 410 aa17.64■□□□□ 0.41
AC055811.3-201ENST00000584952 EIF2S2P20042 333 aaKnown RBP17.64■□□□□ 0.41
AC055811.3-201ENST00000584952 PDIA6Q15084 440 aa17.64■□□□□ 0.41
AC055811.3-201ENST00000584952 PPP1R42Q7Z4L9 355 aa17.64■□□□□ 0.41
AC055811.3-201ENST00000584952 PNMA8AQ86V59 439 aaPredicted RBP17.64■□□□□ 0.41
AC055811.3-201ENST00000584952 TNS4Q8IZW8 715 aa17.64■□□□□ 0.41
AC055811.3-201ENST00000584952 CRAMP1Q96RY5 1269 aa17.64■□□□□ 0.41
AC055811.3-201ENST00000584952 BABAM1Q9NWV8 329 aa17.64■□□□□ 0.41
AC055811.3-201ENST00000584952 CLEC11AQ9Y240 323 aa17.64■□□□□ 0.41
AC055811.3-201ENST00000584952 RNF123Q5XPI4 1314 aa17.64■□□□□ 0.41
AC055811.3-201ENST00000584952 PARP10Q53GL7 1025 aa17.63■□□□□ 0.41
AC055811.3-201ENST00000584952 C3orf67Q6ZVT6 689 aa17.63■□□□□ 0.41
AC055811.3-201ENST00000584952 PPEF1O14829 653 aaPredicted RBP17.62■□□□□ 0.41
AC055811.3-201ENST00000584952 TMPOP42166 694 aaKnown RBP17.62■□□□□ 0.41
AC055811.3-201ENST00000584952 PROSER3Q2NL68 480 aa17.62■□□□□ 0.41
AC055811.3-201ENST00000584952 NLRP3Q96P20 1036 aa17.62■□□□□ 0.41
AC055811.3-201ENST00000584952 TMEM88BA6NKF7 163 aa17.61■□□□□ 0.41
AC055811.3-201ENST00000584952 TCERG1O14776 1098 aaKnown RBP17.61■□□□□ 0.41
AC055811.3-201ENST00000584952 EIF6P56537 245 aaKnown RBP17.61■□□□□ 0.41
AC055811.3-201ENST00000584952 LMOD3Q0VAK6 560 aa17.61■□□□□ 0.41
AC055811.3-201ENST00000584952 SLC10A5Q5PT55 438 aa17.61■□□□□ 0.41
AC055811.3-201ENST00000584952 MAP1SQ66K74 1059 aaPredicted RBP17.61■□□□□ 0.41
AC055811.3-201ENST00000584952 UTP14AQ9BVJ6 771 aaKnown RBP17.61■□□□□ 0.41
AC055811.3-201ENST00000584952 CNTNAP1P78357 1384 aa17.61■□□□□ 0.41
AC055811.3-201ENST00000584952 ANXA1P04083 346 aa17.6■□□□□ 0.41
AC055811.3-201ENST00000584952 SLC51AQ86UW1 340 aa17.6■□□□□ 0.41
AC055811.3-201ENST00000584952 CNTROBQ8N137 903 aa17.6■□□□□ 0.41
AC055811.3-201ENST00000584952 LARGE2Q8N3Y3 721 aa17.6■□□□□ 0.41
AC055811.3-201ENST00000584952 GJA3Q9Y6H8 435 aa17.6■□□□□ 0.41
AC055811.3-201ENST00000584952 COL4A5P29400 1685 aa17.59■□□□□ 0.41
AC055811.3-201ENST00000584952 COPS6Q7L5N1 327 aa17.59■□□□□ 0.41
AC055811.3-201ENST00000584952 ADAMTSL1Q8N6G6 1762 aa17.58■□□□□ 0.41
AC055811.3-201ENST00000584952 CAPN15O75808 1086 aa17.58■□□□□ 0.4
AC055811.3-201ENST00000584952 VEGFBP49765 207 aa17.58■□□□□ 0.4
AC055811.3-201ENST00000584952 NECTIN2Q92692 538 aa17.58■□□□□ 0.4
AC055811.3-201ENST00000584952 TMX4Q9H1E5 349 aaPredicted RBP17.58■□□□□ 0.4
AC055811.3-201ENST00000584952 ATP6V0A2Q9Y487 856 aa17.58■□□□□ 0.4
AC055811.3-201ENST00000584952 CHL1O00533 1208 aa17.57■□□□□ 0.4
AC055811.3-201ENST00000584952 LMOD1P29536 600 aaPredicted RBP17.57■□□□□ 0.4
AC055811.3-201ENST00000584952 AIMP1Q12904 312 aaKnown RBP17.57■□□□□ 0.4
AC055811.3-201ENST00000584952 CCDC146Q8IYE0 955 aa17.57■□□□□ 0.4
AC055811.3-201ENST00000584952 XAGE3Q8WTP9 111 aa17.57■□□□□ 0.4
AC055811.3-201ENST00000584952 ABCC4O15439 1325 aa17.56■□□□□ 0.4
AC055811.3-201ENST00000584952 SCNN1DP51172 638 aa17.56■□□□□ 0.4
AC055811.3-201ENST00000584952 TCIRG1Q13488 830 aa17.56■□□□□ 0.4
AC055811.3-201ENST00000584952 NEUROD2Q15784 382 aa17.56■□□□□ 0.4
AC055811.3-201ENST00000584952 HSP90AB3PQ58FF7 597 aa17.56■□□□□ 0.4
AC055811.3-201ENST00000584952 NLRP10Q86W26 655 aa17.56■□□□□ 0.4
AC055811.3-201ENST00000584952 NIM1KQ8IY84 436 aa17.56■□□□□ 0.4
AC055811.3-201ENST00000584952 VPS33BQ9H267 617 aa17.56■□□□□ 0.4
AC055811.3-201ENST00000584952 MYBBP1AQ9BQG0 1328 aaKnown RBP17.55■□□□□ 0.4
AC055811.3-201ENST00000584952 PPIP5K2O43314 1243 aa17.55■□□□□ 0.4
AC055811.3-201ENST00000584952 BBOX1O75936 387 aa17.55■□□□□ 0.4
AC055811.3-201ENST00000584952 EPS15P42566 896 aa17.55■□□□□ 0.4
AC055811.3-201ENST00000584952 DDX10Q13206 875 aaKnown RBP17.55■□□□□ 0.4
AC055811.3-201ENST00000584952 DDX21Q9NR30 783 aaKnown RBP eCLIP17.55■□□□□ 0.4
AC055811.3-201ENST00000584952 FOXN1O15353 648 aa17.54■□□□□ 0.4
AC055811.3-201ENST00000584952 HCLS1P14317 486 aaPredicted RBP17.54■□□□□ 0.4
AC055811.3-201ENST00000584952 AOC3Q16853 763 aa17.54■□□□□ 0.4
AC055811.3-201ENST00000584952 KRT24Q2M2I5 525 aa17.54■□□□□ 0.4
AC055811.3-201ENST00000584952 DEFB115Q30KQ5 88 aa17.54■□□□□ 0.4
AC055811.3-201ENST00000584952 RUNDC1Q96C34 613 aa17.54■□□□□ 0.4
AC055811.3-201ENST00000584952 RTFDC1Q9BY42 306 aaPredicted RBP17.54■□□□□ 0.4
AC055811.3-201ENST00000584952 TRMT112Q9UI30 125 aaKnown RBP17.54■□□□□ 0.4
AC055811.3-201ENST00000584952 TRIM35Q9UPQ4 493 aa17.54■□□□□ 0.4
AC055811.3-201ENST00000584952 LAS1LQ9Y4W2 734 aaKnown RBP17.54■□□□□ 0.4
AC055811.3-201ENST00000584952 RASSF10A6NK89 507 aa17.53■□□□□ 0.4
AC055811.3-201ENST00000584952 ZEB1P37275 1124 aaPredicted RBP17.53■□□□□ 0.4
AC055811.3-201ENST00000584952 USP50Q70EL3 339 aaPredicted RBP17.53■□□□□ 0.4
AC055811.3-201ENST00000584952 SP8Q8IXZ3 490 aa17.53■□□□□ 0.4
AC055811.3-201ENST00000584952 SUPT20HQ8NEM7 779 aa17.53■□□□□ 0.4
AC055811.3-201ENST00000584952 ZNRF3Q9ULT6 936 aa17.53■□□□□ 0.4
AC055811.3-201ENST00000584952 SH3TC1Q8TE82 1336 aa17.52■□□□□ 0.4
AC055811.3-201ENST00000584952 DPP8Q6V1X1 898 aaPredicted RBP17.52■□□□□ 0.4
AC055811.3-201ENST00000584952 CHPF2Q9P2E5 772 aa17.52■□□□□ 0.4
AC055811.3-201ENST00000584952 ABT1Q9ULW3 272 aaKnown RBP17.52■□□□□ 0.4
AC055811.3-201ENST00000584952 LTBP1Q14766 1721 aa17.52■□□□□ 0.39
AC055811.3-201ENST00000584952 CXCL9Q07325 125 aa17.51■□□□□ 0.39
AC055811.3-201ENST00000584952 WDR43Q15061 677 aaKnown RBP eCLIP17.51■□□□□ 0.39
AC055811.3-201ENST00000584952 DDX46Q7L014 1031 aaKnown RBP17.51■□□□□ 0.39
AC055811.3-201ENST00000584952 MPNDQ8N594 471 aa17.51■□□□□ 0.39
AC055811.3-201ENST00000584952 AIDAQ96BJ3 306 aa17.51■□□□□ 0.39
AC055811.3-201ENST00000584952 WBP1LQ9NX94 342 aa17.51■□□□□ 0.39
AC055811.3-201ENST00000584952 ADAMTS8Q9UP79 889 aa17.51■□□□□ 0.39
AC055811.3-201ENST00000584952 HOXB7P09629 217 aa17.5■□□□□ 0.39
AC055811.3-201ENST00000584952 CTCFP49711 727 aaPredicted RBP17.5■□□□□ 0.39
AC055811.3-201ENST00000584952 HDGFL1Q5TGJ6 251 aa17.5■□□□□ 0.39
AC055811.3-201ENST00000584952 PRDM10Q9NQV6 1147 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms