RNA–Protein interactions for RNA: ENST00000583517.1

NLK-204, Transcript of nemo like kinase, humanhuman

TSL 3

Gene NLK, Length 695 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLK-204ENST00000583517 RIPK4P57078 832 aa15.63■□□□□ 0.09
NLK-204ENST00000583517 PDIA6Q15084 440 aa15.63■□□□□ 0.09
NLK-204ENST00000583517 RALBP1Q15311 655 aa15.63■□□□□ 0.09
NLK-204ENST00000583517 CC2D2BQ6DHV5 1058 aa15.63■□□□□ 0.09
NLK-204ENST00000583517 BABAM1Q9NWV8 329 aa15.63■□□□□ 0.09
NLK-204ENST00000583517 ADAMTSL1Q8N6G6 1762 aa15.62■□□□□ 0.09
NLK-204ENST00000583517 RPGRQ92834 1020 aaKnown RBP15.62■□□□□ 0.09
NLK-204ENST00000583517 HACL1Q9UJ83 578 aa15.62■□□□□ 0.09
NLK-204ENST00000583517 COL4A5P29400 1685 aa15.62■□□□□ 0.09
NLK-204ENST00000583517 HSPA1AP0DMV8 641 aaKnown RBP15.61■□□□□ 0.09
NLK-204ENST00000583517 HSPA1BP0DMV9 641 aaKnown RBP15.61■□□□□ 0.09
NLK-204ENST00000583517 GRIPAP1Q4V328 841 aa15.61■□□□□ 0.09
NLK-204ENST00000583517 PARP10Q53GL7 1025 aa15.61■□□□□ 0.09
NLK-204ENST00000583517 C3orf67Q6ZVT6 689 aa15.61■□□□□ 0.09
NLK-204ENST00000583517 GPC2Q8N158 579 aa15.61■□□□□ 0.09
NLK-204ENST00000583517 CRAMP1Q96RY5 1269 aa15.61■□□□□ 0.09
NLK-204ENST00000583517 ITGBL1O95965 494 aaPredicted RBP15.6■□□□□ 0.09
NLK-204ENST00000583517 EPHX2P34913 555 aa15.6■□□□□ 0.09
NLK-204ENST00000583517 TMPOP42166 694 aaKnown RBP15.6■□□□□ 0.09
NLK-204ENST00000583517 PROSER3Q2NL68 480 aa15.6■□□□□ 0.09
NLK-204ENST00000583517 PPP1R42Q7Z4L9 355 aa15.6■□□□□ 0.09
NLK-204ENST00000583517 JDP2Q8WYK2 163 aa15.6■□□□□ 0.09
NLK-204ENST00000583517 RBM17Q96I25 401 aaKnown RBP15.6■□□□□ 0.09
NLK-204ENST00000583517 RNF123Q5XPI4 1314 aa15.6■□□□□ 0.09
NLK-204ENST00000583517 EIF2S2P20042 333 aaKnown RBP15.59■□□□□ 0.09
NLK-204ENST00000583517 LMOD3Q0VAK6 560 aa15.59■□□□□ 0.09
NLK-204ENST00000583517 EAPPQ56P03 285 aaPredicted RBP15.59■□□□□ 0.09
NLK-204ENST00000583517 SLC51AQ86UW1 340 aa15.59■□□□□ 0.09
NLK-204ENST00000583517 PNMA8AQ86V59 439 aaPredicted RBP15.59■□□□□ 0.09
NLK-204ENST00000583517 MKRN1Q9UHC7 482 aaKnown RBP15.59■□□□□ 0.09
NLK-204ENST00000583517 CNTNAP1P78357 1384 aa15.59■□□□□ 0.09
NLK-204ENST00000583517 PPEF1O14829 653 aaPredicted RBP15.58■□□□□ 0.08
NLK-204ENST00000583517 ANXA1P04083 346 aa15.58■□□□□ 0.08
NLK-204ENST00000583517 SLC10A5Q5PT55 438 aa15.58■□□□□ 0.08
NLK-204ENST00000583517 NLRP3Q96P20 1036 aa15.57■□□□□ 0.08
NLK-204ENST00000583517 UTP14AQ9BVJ6 771 aaKnown RBP15.57■□□□□ 0.08
NLK-204ENST00000583517 MYBBP1AQ9BQG0 1328 aaKnown RBP15.57■□□□□ 0.08
NLK-204ENST00000583517 TMEM88BA6NKF7 163 aa15.56■□□□□ 0.08
NLK-204ENST00000583517 EIF6P56537 245 aaKnown RBP15.56■□□□□ 0.08
NLK-204ENST00000583517 TNS4Q8IZW8 715 aa15.56■□□□□ 0.08
NLK-204ENST00000583517 CLEC11AQ9Y240 323 aa15.56■□□□□ 0.08
NLK-204ENST00000583517 LTBP1Q14766 1721 aa15.56■□□□□ 0.08
NLK-204ENST00000583517 ANKRD36CQ5JPF3 1778 aa15.55■□□□□ 0.08
NLK-204ENST00000583517 ABCC4O15439 1325 aa15.55■□□□□ 0.08
NLK-204ENST00000583517 CHL1O00533 1208 aa15.55■□□□□ 0.08
NLK-204ENST00000583517 COPS6Q7L5N1 327 aa15.55■□□□□ 0.08
NLK-204ENST00000583517 CNTROBQ8N137 903 aa15.55■□□□□ 0.08
NLK-204ENST00000583517 LARGE2Q8N3Y3 721 aa15.55■□□□□ 0.08
NLK-204ENST00000583517 ATP6V0A2Q9Y487 856 aa15.55■□□□□ 0.08
NLK-204ENST00000583517 TCERG1O14776 1098 aaKnown RBP15.54■□□□□ 0.08
NLK-204ENST00000583517 SCNN1DP51172 638 aa15.54■□□□□ 0.08
NLK-204ENST00000583517 HSP90AB3PQ58FF7 597 aa15.54■□□□□ 0.08
NLK-204ENST00000583517 MAP1SQ66K74 1059 aaPredicted RBP15.54■□□□□ 0.08
NLK-204ENST00000583517 NLRP10Q86W26 655 aa15.54■□□□□ 0.08
NLK-204ENST00000583517 CCDC146Q8IYE0 955 aa15.54■□□□□ 0.08
NLK-204ENST00000583517 XAGE3Q8WTP9 111 aa15.54■□□□□ 0.08
NLK-204ENST00000583517 NECTIN2Q92692 538 aa15.54■□□□□ 0.08
NLK-204ENST00000583517 VPS33BQ9H267 617 aa15.54■□□□□ 0.08
NLK-204ENST00000583517 DDX21Q9NR30 783 aaKnown RBP eCLIP15.54■□□□□ 0.08
NLK-204ENST00000583517 TRIM35Q9UPQ4 493 aa15.54■□□□□ 0.08
NLK-204ENST00000583517 GJA3Q9Y6H8 435 aa15.54■□□□□ 0.08
NLK-204ENST00000583517 VEGFBP49765 207 aa15.53■□□□□ 0.08
NLK-204ENST00000583517 AIMP1Q12904 312 aaKnown RBP15.53■□□□□ 0.08
NLK-204ENST00000583517 DDX10Q13206 875 aaKnown RBP15.53■□□□□ 0.08
NLK-204ENST00000583517 TCIRG1Q13488 830 aa15.53■□□□□ 0.08
NLK-204ENST00000583517 NEUROD2Q15784 382 aa15.53■□□□□ 0.08
NLK-204ENST00000583517 KRT24Q2M2I5 525 aa15.53■□□□□ 0.08
NLK-204ENST00000583517 RUNDC1Q96C34 613 aa15.53■□□□□ 0.08
NLK-204ENST00000583517 RTFDC1Q9BY42 306 aaPredicted RBP15.53■□□□□ 0.08
NLK-204ENST00000583517 LAMB2P55268 1798 aa15.52■□□□□ 0.08
NLK-204ENST00000583517 RASSF10A6NK89 507 aa15.52■□□□□ 0.08
NLK-204ENST00000583517 PPIP5K2O43314 1243 aa15.52■□□□□ 0.08
NLK-204ENST00000583517 LMOD1P29536 600 aaPredicted RBP15.52■□□□□ 0.08
NLK-204ENST00000583517 AOC3Q16853 763 aa15.52■□□□□ 0.08
NLK-204ENST00000583517 NIM1KQ8IY84 436 aa15.52■□□□□ 0.08
NLK-204ENST00000583517 BBOX1O75936 387 aa15.51■□□□□ 0.07
NLK-204ENST00000583517 HOXB7P09629 217 aa15.51■□□□□ 0.07
NLK-204ENST00000583517 HCLS1P14317 486 aaPredicted RBP15.51■□□□□ 0.07
NLK-204ENST00000583517 EPS15P42566 896 aa15.51■□□□□ 0.07
NLK-204ENST00000583517 SP8Q8IXZ3 490 aa15.51■□□□□ 0.07
NLK-204ENST00000583517 TMX4Q9H1E5 349 aaPredicted RBP15.51■□□□□ 0.07
NLK-204ENST00000583517 CHPF2Q9P2E5 772 aa15.51■□□□□ 0.07
NLK-204ENST00000583517 TRMT112Q9UI30 125 aaKnown RBP15.51■□□□□ 0.07
NLK-204ENST00000583517 SH3TC1Q8TE82 1336 aa15.5■□□□□ 0.07
NLK-204ENST00000583517 FOXN1O15353 648 aa15.5■□□□□ 0.07
NLK-204ENST00000583517 USP50Q70EL3 339 aaPredicted RBP15.5■□□□□ 0.07
NLK-204ENST00000583517 SUPT20HQ8NEM7 779 aa15.5■□□□□ 0.07
NLK-204ENST00000583517 ADAMTS8Q9UP79 889 aa15.5■□□□□ 0.07
NLK-204ENST00000583517 GRAPQ13588 217 aa15.49■□□□□ 0.07
NLK-204ENST00000583517 WDR43Q15061 677 aaKnown RBP eCLIP15.49■□□□□ 0.07
NLK-204ENST00000583517 HDGFL1Q5TGJ6 251 aa15.49■□□□□ 0.07
NLK-204ENST00000583517 DPP8Q6V1X1 898 aaPredicted RBP15.49■□□□□ 0.07
NLK-204ENST00000583517 DDX46Q7L014 1031 aaKnown RBP15.49■□□□□ 0.07
NLK-204ENST00000583517 GRAPLQ8TC17 118 aaPredicted RBP15.49■□□□□ 0.07
NLK-204ENST00000583517 ZNRF3Q9ULT6 936 aa15.49■□□□□ 0.07
NLK-204ENST00000583517 LAS1LQ9Y4W2 734 aaKnown RBP15.49■□□□□ 0.07
NLK-204ENST00000583517 CAPN15O75808 1086 aa15.48■□□□□ 0.07
NLK-204ENST00000583517 CXCL9Q07325 125 aa15.48■□□□□ 0.07
NLK-204ENST00000583517 KIAA2012Q0VF49 1180 aa15.48■□□□□ 0.07
NLK-204ENST00000583517 DEFB115Q30KQ5 88 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms