RNA–Protein interactions for RNA: ENST00000583043.5

RTTN-209, Transcript of rotatin, humanhuman

TSL 1 (best)

Gene RTTN, Length 6,278 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-209ENST00000583043 ZNF287Q9HBT7 754 aa6.87□□□□□ -1.31
RTTN-209ENST00000583043 CNNM1Q9NRU3 951 aa6.87□□□□□ -1.31
RTTN-209ENST00000583043 ATG3Q9NT62 314 aa6.87□□□□□ -1.31
RTTN-209ENST00000583043 ARGLU1Q9NWB6 273 aaPredicted RBP6.87□□□□□ -1.31
RTTN-209ENST00000583043 NOL7Q9UMY1 257 aaKnown RBP6.87□□□□□ -1.31
RTTN-209ENST00000583043 RGS12O14924 1447 aa6.87□□□□□ -1.31
RTTN-209ENST00000583043 RRP9O43818 475 aaKnown RBP6.87□□□□□ -1.31
RTTN-209ENST00000583043 MCMDC2Q4G0Z9 681 aa6.87□□□□□ -1.31
RTTN-209ENST00000583043 CCDC191Q8NCU4 936 aa6.87□□□□□ -1.31
RTTN-209ENST00000583043 ZCRB1Q8TBF4 217 aaKnown RBP6.87□□□□□ -1.31
RTTN-209ENST00000583043 NEK1Q96PY6 1258 aa6.87□□□□□ -1.31
RTTN-209ENST00000583043 ANKRD18BA2A2Z9 1011 aa6.87□□□□□ -1.31
RTTN-209ENST00000583043 SMARCC1Q92922 1105 aaPredicted RBP6.87□□□□□ -1.31
RTTN-209ENST00000583043 PRIMPOLQ96LW4 560 aa6.87□□□□□ -1.31
RTTN-209ENST00000583043 MIS18AQ9NYP9 233 aa6.87□□□□□ -1.31
RTTN-209ENST00000583043 RBM27Q9P2N5 1060 aaKnown RBP6.87□□□□□ -1.31
RTTN-209ENST00000583043 ZRANB1Q9UGI0 708 aa6.87□□□□□ -1.31
RTTN-209ENST00000583043 MROH2AA6NES4 1674 aa6.87□□□□□ -1.31
RTTN-209ENST00000583043 MYO1BO43795 1136 aa6.87□□□□□ -1.31
RTTN-209ENST00000583043 APPP05067 770 aa6.87□□□□□ -1.31
RTTN-209ENST00000583043 GNAT2P19087 354 aa6.87□□□□□ -1.31
RTTN-209ENST00000583043 GSDMDP57764 484 aa6.87□□□□□ -1.31
RTTN-209ENST00000583043 PPP2R5BQ15173 497 aa6.87□□□□□ -1.31
RTTN-209ENST00000583043 USP25Q9UHP3 1055 aa6.87□□□□□ -1.31
RTTN-209ENST00000583043 MYOM1P52179 1685 aa6.87□□□□□ -1.31
RTTN-209ENST00000583043 IGHMBP2P38935 993 aaKnown RBP6.87□□□□□ -1.31
RTTN-209ENST00000583043 CNNM2Q9H8M5 875 aa6.87□□□□□ -1.31
RTTN-209ENST00000583043 SLC52A2Q9HAB3 445 aa6.87□□□□□ -1.31
RTTN-209ENST00000583043 MAP3K12Q12852 859 aa6.86□□□□□ -1.31
RTTN-209ENST00000583043 TNNQ9UQP3 1299 aa6.86□□□□□ -1.31
RTTN-209ENST00000583043 ADAMTS13Q76LX8 1427 aa6.86□□□□□ -1.31
RTTN-209ENST00000583043 CCDC171Q6TFL3 1326 aa6.86□□□□□ -1.31
RTTN-209ENST00000583043 FIBPO43427 364 aa6.86□□□□□ -1.31
RTTN-209ENST00000583043 F13A1P00488 732 aa6.86□□□□□ -1.31
RTTN-209ENST00000583043 SLC5A1P13866 664 aa6.86□□□□□ -1.31
RTTN-209ENST00000583043 KANK3Q6NY19 840 aa6.86□□□□□ -1.31
RTTN-209ENST00000583043 VPS37DQ86XT2 251 aa6.86□□□□□ -1.31
RTTN-209ENST00000583043 RGS22Q8NE09 1264 aa6.86□□□□□ -1.31
RTTN-209ENST00000583043 ANTXR1Q9H6X2 564 aa6.86□□□□□ -1.31
RTTN-209ENST00000583043 USP19O94966 1318 aa6.86□□□□□ -1.31
RTTN-209ENST00000583043 TXLNAP40222 546 aa6.86□□□□□ -1.31
RTTN-209ENST00000583043 ARHGEF25Q86VW2 580 aa6.86□□□□□ -1.31
RTTN-209ENST00000583043 PPP4R3BQ5MIZ7 849 aa6.86□□□□□ -1.31
RTTN-209ENST00000583043 ZNF790Q6PG37 636 aa6.86□□□□□ -1.31
RTTN-209ENST00000583043 CERS3Q8IU89 383 aa6.86□□□□□ -1.31
RTTN-209ENST00000583043 GOLGA6L1Q8N7Z2 621 aa6.86□□□□□ -1.31
RTTN-209ENST00000583043 TOMM22Q9NS69 142 aa6.86□□□□□ -1.31
RTTN-209ENST00000583043 BRPF3Q9ULD4 1205 aa6.86□□□□□ -1.31
RTTN-209ENST00000583043 SLIT1O75093 1534 aa6.86□□□□□ -1.31
RTTN-209ENST00000583043 SF3B2Q13435 895 aaKnown RBP6.86□□□□□ -1.31
RTTN-209ENST00000583043 POLA2Q14181 598 aa6.86□□□□□ -1.31
RTTN-209ENST00000583043 CDC5LQ99459 802 aaKnown RBP6.86□□□□□ -1.31
RTTN-209ENST00000583043 RICTORQ6R327 1708 aa6.85□□□□□ -1.31
RTTN-209ENST00000583043 IL2RBP14784 551 aa6.85□□□□□ -1.31
RTTN-209ENST00000583043 ZSCAN23Q3MJ62 389 aa6.85□□□□□ -1.31
RTTN-209ENST00000583043 CCDC70Q6NSX1 233 aa6.85□□□□□ -1.31
RTTN-209ENST00000583043 RUFY3Q7L099 469 aa6.85□□□□□ -1.31
RTTN-209ENST00000583043 TRIM5Q9C035 493 aa6.85□□□□□ -1.31
RTTN-209ENST00000583043 SEC24BO95487 1268 aa6.85□□□□□ -1.31
RTTN-209ENST00000583043 BRD1O95696 1058 aa6.85□□□□□ -1.31
RTTN-209ENST00000583043 ATP5JP18859 108 aa6.85□□□□□ -1.31
RTTN-209ENST00000583043 CUL4AQ13619 759 aa6.85□□□□□ -1.31
RTTN-209ENST00000583043 BEND3Q5T5X7 828 aa6.85□□□□□ -1.31
RTTN-209ENST00000583043 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.85□□□□□ -1.31
RTTN-209ENST00000583043 KRI1Q8N9T8 703 aaKnown RBP6.85□□□□□ -1.31
RTTN-209ENST00000583043 MPHOSPH8Q99549 860 aa6.85□□□□□ -1.31
RTTN-209ENST00000583043 IPO7O95373 1038 aaKnown RBP6.85□□□□□ -1.31
RTTN-209ENST00000583043 FILIP1LQ4L180 1135 aa6.85□□□□□ -1.31
RTTN-209ENST00000583043 BRAPQ7Z569 592 aa6.85□□□□□ -1.31
RTTN-209ENST00000583043 NCOA7Q8NI08 942 aa6.85□□□□□ -1.31
RTTN-209ENST00000583043 KCNG4Q8TDN1 519 aa6.85□□□□□ -1.31
RTTN-209ENST00000583043 COPRSQ9NQ92 184 aa6.85□□□□□ -1.31
RTTN-209ENST00000583043 GOLGA6L9A6NEM1 432 aa6.85□□□□□ -1.31
RTTN-209ENST00000583043 CCDC69A6NI79 296 aa6.85□□□□□ -1.31
RTTN-209ENST00000583043 FOXD4L5Q5VV16 416 aaPredicted RBP6.85□□□□□ -1.31
RTTN-209ENST00000583043 XAGE3Q8WTP9 111 aa6.85□□□□□ -1.31
RTTN-209ENST00000583043 FOXD4L4Q8WXT5 416 aaPredicted RBP6.85□□□□□ -1.31
RTTN-209ENST00000583043 AK7Q96M32 723 aa6.85□□□□□ -1.31
RTTN-209ENST00000583043 USP44Q9H0E7 712 aa6.85□□□□□ -1.31
RTTN-209ENST00000583043 XRCC6P12956 609 aaKnown RBP eCLIP6.85□□□□□ -1.31
RTTN-209ENST00000583043 MYL6BP14649 208 aa6.85□□□□□ -1.31
RTTN-209ENST00000583043 ZC3H6P61129 1189 aaKnown RBP6.85□□□□□ -1.31
RTTN-209ENST00000583043 TUBB4BP68371 445 aa6.85□□□□□ -1.31
RTTN-209ENST00000583043 RBM8AQ9Y5S9 174 aaKnown RBP6.85□□□□□ -1.31
RTTN-209ENST00000583043 GIGYF1O75420 1035 aaPredicted RBP6.84□□□□□ -1.31
RTTN-209ENST00000583043 GJB2P29033 226 aa6.84□□□□□ -1.31
RTTN-209ENST00000583043 TPD52L1Q16890 204 aaPredicted RBP6.84□□□□□ -1.31
RTTN-209ENST00000583043 KRT23Q9C075 422 aa6.84□□□□□ -1.31
RTTN-209ENST00000583043 ACBD3Q9H3P7 528 aa6.84□□□□□ -1.31
RTTN-209ENST00000583043 ARHGAP23Q9P227 1491 aa6.84□□□□□ -1.31
RTTN-209ENST00000583043 SMC2O95347 1197 aa6.84□□□□□ -1.31
RTTN-209ENST00000583043 STX1AQ16623 288 aa6.84□□□□□ -1.31
RTTN-209ENST00000583043 IL17REQ8NFR9 667 aa6.84□□□□□ -1.31
RTTN-209ENST00000583043 FAM200AQ8TCP9 573 aa6.84□□□□□ -1.31
RTTN-209ENST00000583043 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.84□□□□□ -1.31
RTTN-209ENST00000583043 DSCC1Q9BVC3 393 aa6.84□□□□□ -1.31
RTTN-209ENST00000583043 ALDH8A1Q9H2A2 487 aaPredicted RBP6.84□□□□□ -1.31
RTTN-209ENST00000583043 PARP10Q53GL7 1025 aa6.84□□□□□ -1.31
RTTN-209ENST00000583043 NAA16Q6N069 864 aaPredicted RBP6.84□□□□□ -1.31
RTTN-209ENST00000583043 SMARCE1Q969G3 411 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms