RNA–Protein interactions for RNA: ENST00000580315.1

CDC42EP4-205, Transcript of CDC42 effector protein 4, humanhuman

TSL 2

Gene CDC42EP4, Length 1,022 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-205ENST00000580315 WWC1Q8IX03 1113 aa32.21■■■□□ 2.75
CDC42EP4-205ENST00000580315 FKBP4Q02790 459 aaKnown RBP eCLIP32.2■■■□□ 2.75
CDC42EP4-205ENST00000580315 DUSP27Q5VZP5 1158 aa32.2■■■□□ 2.75
CDC42EP4-205ENST00000580315 OLFM4Q6UX06 510 aa32.2■■■□□ 2.75
CDC42EP4-205ENST00000580315 IQCA1LA6NCM1 817 aa32.19■■■□□ 2.74
CDC42EP4-205ENST00000580315 HSPA1AP0DMV8 641 aaKnown RBP32.19■■■□□ 2.74
CDC42EP4-205ENST00000580315 HSPA1BP0DMV9 641 aaKnown RBP32.19■■■□□ 2.74
CDC42EP4-205ENST00000580315 L3MBTL3Q96JM7 780 aaPredicted RBP32.19■■■□□ 2.74
CDC42EP4-205ENST00000580315 ZBTB3Q9H5J0 574 aa32.19■■■□□ 2.74
CDC42EP4-205ENST00000580315 DDX21Q9NR30 783 aaKnown RBP eCLIP32.19■■■□□ 2.74
CDC42EP4-205ENST00000580315 ZNF277Q9NRM2 450 aaPredicted RBP32.19■■■□□ 2.74
CDC42EP4-205ENST00000580315 PROSER3Q2NL68 480 aa32.18■■■□□ 2.74
CDC42EP4-205ENST00000580315 CREBZFQ9NS37 354 aa32.18■■■□□ 2.74
CDC42EP4-205ENST00000580315 ANXA1P04083 346 aa32.17■■■□□ 2.74
CDC42EP4-205ENST00000580315 GTF2E1P29083 439 aaPredicted RBP32.17■■■□□ 2.74
CDC42EP4-205ENST00000580315 LRP10Q7Z4F1 713 aa32.17■■■□□ 2.74
CDC42EP4-205ENST00000580315 RTKN2Q8IZC4 609 aa32.17■■■□□ 2.74
CDC42EP4-205ENST00000580315 ALDH1B1P30837 517 aa32.16■■■□□ 2.74
CDC42EP4-205ENST00000580315 TAF1DQ9H5J8 278 aaPredicted RBP32.16■■■□□ 2.74
CDC42EP4-205ENST00000580315 TNS4Q8IZW8 715 aa32.15■■■□□ 2.74
CDC42EP4-205ENST00000580315 CHPF2Q9P2E5 772 aa32.15■■■□□ 2.74
CDC42EP4-205ENST00000580315 DBF4Q9UBU7 674 aaPredicted RBP32.15■■■□□ 2.74
CDC42EP4-205ENST00000580315 GIGYF2Q6Y7W6 1299 aaKnown RBP32.14■■■□□ 2.74
CDC42EP4-205ENST00000580315 LDHDQ86WU2 507 aa32.14■■■□□ 2.74
CDC42EP4-205ENST00000580315 CHMP4AQ9BY43 222 aa32.14■■■□□ 2.74
CDC42EP4-205ENST00000580315 IL16Q14005 1332 aa32.14■■■□□ 2.74
CDC42EP4-205ENST00000580315 ZNF541Q9H0D2 1346 aa32.14■■■□□ 2.74
CDC42EP4-205ENST00000580315 COPS6Q7L5N1 327 aa32.13■■■□□ 2.73
CDC42EP4-205ENST00000580315 XAGE3Q8WTP9 111 aa32.13■■■□□ 2.73
CDC42EP4-205ENST00000580315 SALL2Q9Y467 1007 aaPredicted RBP32.13■■■□□ 2.73
CDC42EP4-205ENST00000580315 AIMP1Q12904 312 aaKnown RBP32.12■■■□□ 2.73
CDC42EP4-205ENST00000580315 CRY2Q49AN0 593 aa32.12■■■□□ 2.73
CDC42EP4-205ENST00000580315 NYXQ9GZU5 481 aa32.12■■■□□ 2.73
CDC42EP4-205ENST00000580315 MKRN1Q9UHC7 482 aaKnown RBP32.12■■■□□ 2.73
CDC42EP4-205ENST00000580315 ELL2O00472 640 aaPredicted RBP32.11■■■□□ 2.73
CDC42EP4-205ENST00000580315 NUTM1Q86Y26 1132 aa32.11■■■□□ 2.73
CDC42EP4-205ENST00000580315 ABCC12Q96J65 1359 aa32.1■■■□□ 2.73
CDC42EP4-205ENST00000580315 PASKQ96RG2 1323 aa32.1■■■□□ 2.73
CDC42EP4-205ENST00000580315 SYNE4Q8N205 404 aa32.1■■■□□ 2.73
CDC42EP4-205ENST00000580315 HYPKQ9NX55 129 aa32.1■■■□□ 2.73
CDC42EP4-205ENST00000580315 GPTP24298 496 aa32.09■■■□□ 2.73
CDC42EP4-205ENST00000580315 IARSP41252 1262 aaKnown RBP32.09■■■□□ 2.73
CDC42EP4-205ENST00000580315 WDR63Q8IWG1 891 aa32.09■■■□□ 2.73
CDC42EP4-205ENST00000580315 C8orf58Q8NAV2 365 aa32.09■■■□□ 2.73
CDC42EP4-205ENST00000580315 TSR2Q969E8 191 aaKnown RBP32.09■■■□□ 2.73
CDC42EP4-205ENST00000580315 SCN4AP35499 1836 aa32.09■■■□□ 2.73
CDC42EP4-205ENST00000580315 HSP90AB3PQ58FF7 597 aa32.08■■■□□ 2.73
CDC42EP4-205ENST00000580315 ZNF34Q8IZ26 560 aa32.08■■■□□ 2.73
CDC42EP4-205ENST00000580315 HACL1Q9UJ83 578 aa32.08■■■□□ 2.73
CDC42EP4-205ENST00000580315 FZD9O00144 591 aa32.07■■■□□ 2.72
CDC42EP4-205ENST00000580315 PARP10Q53GL7 1025 aa32.07■■■□□ 2.72
CDC42EP4-205ENST00000580315 CAPN15O75808 1086 aa32.06■■■□□ 2.72
CDC42EP4-205ENST00000580315 EAPPQ56P03 285 aaPredicted RBP32.06■■■□□ 2.72
CDC42EP4-205ENST00000580315 PSMD1Q99460 953 aa32.06■■■□□ 2.72
CDC42EP4-205ENST00000580315 SNED1Q8TER0 1413 aa32.06■■■□□ 2.72
CDC42EP4-205ENST00000580315 IBTKQ9P2D0 1353 aaPredicted RBP32.06■■■□□ 2.72
CDC42EP4-205ENST00000580315 ITGBL1O95965 494 aaPredicted RBP32.05■■■□□ 2.72
CDC42EP4-205ENST00000580315 PPP1R42Q7Z4L9 355 aa32.05■■■□□ 2.72
CDC42EP4-205ENST00000580315 UBN2Q6ZU65 1347 aa32.04■■■□□ 2.72
CDC42EP4-205ENST00000580315 EPHX2P34913 555 aa32.04■■■□□ 2.72
CDC42EP4-205ENST00000580315 CCDC30Q5VVM6 783 aa32.04■■■□□ 2.72
CDC42EP4-205ENST00000580315 CCER2I3L3R5 266 aa32.03■■■□□ 2.72
CDC42EP4-205ENST00000580315 HOXA10P31260 410 aaPredicted RBP32.03■■■□□ 2.72
CDC42EP4-205ENST00000580315 SUSD4Q5VX71 490 aa32.03■■■□□ 2.72
CDC42EP4-205ENST00000580315 CC2D2BQ6DHV5 1058 aa32.03■■■□□ 2.72
CDC42EP4-205ENST00000580315 CNTNAP1P78357 1384 aa32.03■■■□□ 2.72
CDC42EP4-205ENST00000580315 NUP98P52948 1817 aa32.03■■■□□ 2.72
CDC42EP4-205ENST00000580315 RNF123Q5XPI4 1314 aa32.02■■■□□ 2.72
CDC42EP4-205ENST00000580315 ANKRD13DQ6ZTN6 518 aa32.02■■■□□ 2.72
CDC42EP4-205ENST00000580315 GPC2Q8N158 579 aa32.02■■■□□ 2.72
CDC42EP4-205ENST00000580315 PLBD2Q8NHP8 589 aa32.02■■■□□ 2.72
CDC42EP4-205ENST00000580315 JDP2Q8WYK2 163 aa32.02■■■□□ 2.72
CDC42EP4-205ENST00000580315 RPGRQ92834 1020 aaKnown RBP32.02■■■□□ 2.72
CDC42EP4-205ENST00000580315 CLEC11AQ9Y240 323 aa32.02■■■□□ 2.72
CDC42EP4-205ENST00000580315 PNMA8AQ86V59 439 aaPredicted RBP32.01■■■□□ 2.71
CDC42EP4-205ENST00000580315 RIC1Q4ADV7 1423 aa32■■■□□ 2.71
CDC42EP4-205ENST00000580315 TMEM88BA6NKF7 163 aa32■■■□□ 2.71
CDC42EP4-205ENST00000580315 TCIRG1Q13488 830 aa32■■■□□ 2.71
CDC42EP4-205ENST00000580315 TSPYL6Q8N831 410 aa32■■■□□ 2.71
CDC42EP4-205ENST00000580315 TWISTNBQ3B726 338 aaPredicted RBP31.99■■■□□ 2.71
CDC42EP4-205ENST00000580315 UTP14AQ9BVJ6 771 aaKnown RBP31.99■■■□□ 2.71
CDC42EP4-205ENST00000580315 FANCIQ9NVI1 1328 aa31.99■■■□□ 2.71
CDC42EP4-205ENST00000580315 NTSR2O95665 410 aa31.98■■■□□ 2.71
CDC42EP4-205ENST00000580315 GOLGA2Q08379 1002 aa31.98■■■□□ 2.71
CDC42EP4-205ENST00000580315 CRAMP1Q96RY5 1269 aa31.97■■■□□ 2.71
CDC42EP4-205ENST00000580315 STK31Q9BXU1 1019 aa31.97■■■□□ 2.71
CDC42EP4-205ENST00000580315 ADAMTSL1Q8N6G6 1762 aa31.96■■■□□ 2.71
CDC42EP4-205ENST00000580315 GRIPAP1Q4V328 841 aa31.96■■■□□ 2.71
CDC42EP4-205ENST00000580315 CNTROBQ8N137 903 aa31.96■■■□□ 2.71
CDC42EP4-205ENST00000580315 RBM17Q96I25 401 aaKnown RBP31.96■■■□□ 2.71
CDC42EP4-205ENST00000580315 MYH16Q9H6N6 1097 aa31.96■■■□□ 2.71
CDC42EP4-205ENST00000580315 COL4A5P29400 1685 aa31.95■■■□□ 2.71
CDC42EP4-205ENST00000580315 EIF6P56537 245 aaKnown RBP31.95■■■□□ 2.71
CDC42EP4-205ENST00000580315 MAP1SQ66K74 1059 aaPredicted RBP31.95■■■□□ 2.71
CDC42EP4-205ENST00000580315 NLRP10Q86W26 655 aa31.95■■■□□ 2.71
CDC42EP4-205ENST00000580315 VEGFBP49765 207 aa31.94■■■□□ 2.7
CDC42EP4-205ENST00000580315 C3orf67Q6ZVT6 689 aa31.94■■■□□ 2.7
CDC42EP4-205ENST00000580315 RIC3Q7Z5B4 369 aa31.94■■■□□ 2.7
CDC42EP4-205ENST00000580315 SLC51AQ86UW1 340 aa31.94■■■□□ 2.7
CDC42EP4-205ENST00000580315 PHAXQ9H814 394 aaKnown RBP31.94■■■□□ 2.7
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms