RNA–Protein interactions for RNA: ENST00000579495.1

RPL17-206, Transcript of ribosomal protein L17, humanhuman

TSL 2

Gene RPL17, Length 914 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL17-206ENST00000579495 RBM17Q96I25 401 aaKnown RBP25.67■■□□□ 1.7
RPL17-206ENST00000579495 HACL1Q9UJ83 578 aa25.67■■□□□ 1.7
RPL17-206ENST00000579495 ANXA1P04083 346 aa25.66■■□□□ 1.7
RPL17-206ENST00000579495 CC2D2BQ6DHV5 1058 aa25.66■■□□□ 1.7
RPL17-206ENST00000579495 NTSR2O95665 410 aa25.65■■□□□ 1.7
RPL17-206ENST00000579495 HOXA10P31260 410 aaPredicted RBP25.65■■□□□ 1.7
RPL17-206ENST00000579495 CCDC146Q8IYE0 955 aa25.65■■□□□ 1.7
RPL17-206ENST00000579495 PSMD1Q99460 953 aa25.65■■□□□ 1.7
RPL17-206ENST00000579495 CREBZFQ9NS37 354 aa25.65■■□□□ 1.7
RPL17-206ENST00000579495 MKRN1Q9UHC7 482 aaKnown RBP25.65■■□□□ 1.7
RPL17-206ENST00000579495 FZD9O00144 591 aa25.64■■□□□ 1.7
RPL17-206ENST00000579495 HSPA1AP0DMV8 641 aaKnown RBP25.64■■□□□ 1.7
RPL17-206ENST00000579495 HSPA1BP0DMV9 641 aaKnown RBP25.64■■□□□ 1.7
RPL17-206ENST00000579495 PDIA6Q15084 440 aa25.64■■□□□ 1.7
RPL17-206ENST00000579495 PROSER3Q2NL68 480 aa25.64■■□□□ 1.7
RPL17-206ENST00000579495 PARP10Q53GL7 1025 aa25.64■■□□□ 1.7
RPL17-206ENST00000579495 NLRP3Q96P20 1036 aa25.64■■□□□ 1.7
RPL17-206ENST00000579495 BABAM1Q9NWV8 329 aa25.64■■□□□ 1.7
RPL17-206ENST00000579495 IBTKQ9P2D0 1353 aaPredicted RBP25.64■■□□□ 1.69
RPL17-206ENST00000579495 EPHX2P34913 555 aa25.63■■□□□ 1.69
RPL17-206ENST00000579495 AIMP1Q12904 312 aaKnown RBP25.63■■□□□ 1.69
RPL17-206ENST00000579495 CRAMP1Q96RY5 1269 aa25.63■■□□□ 1.69
RPL17-206ENST00000579495 UTP14AQ9BVJ6 771 aaKnown RBP25.63■■□□□ 1.69
RPL17-206ENST00000579495 LAS1LQ9Y4W2 734 aaKnown RBP25.63■■□□□ 1.69
RPL17-206ENST00000579495 GJA3Q9Y6H8 435 aa25.63■■□□□ 1.69
RPL17-206ENST00000579495 RNF123Q5XPI4 1314 aa25.63■■□□□ 1.69
RPL17-206ENST00000579495 PPEF1O14829 653 aaPredicted RBP25.62■■□□□ 1.69
RPL17-206ENST00000579495 C3orf67Q6ZVT6 689 aa25.62■■□□□ 1.69
RPL17-206ENST00000579495 SCN4AP35499 1836 aa25.62■■□□□ 1.69
RPL17-206ENST00000579495 EIF6P56537 245 aaKnown RBP25.61■■□□□ 1.69
RPL17-206ENST00000579495 COPS6Q7L5N1 327 aa25.61■■□□□ 1.69
RPL17-206ENST00000579495 LRP10Q7Z4F1 713 aa25.61■■□□□ 1.69
RPL17-206ENST00000579495 GPC2Q8N158 579 aa25.61■■□□□ 1.69
RPL17-206ENST00000579495 TMX4Q9H1E5 349 aaPredicted RBP25.61■■□□□ 1.69
RPL17-206ENST00000579495 GRIPAP1Q4V328 841 aa25.6■■□□□ 1.69
RPL17-206ENST00000579495 LARGE2Q8N3Y3 721 aa25.6■■□□□ 1.69
RPL17-206ENST00000579495 RIC1Q4ADV7 1423 aa25.6■■□□□ 1.69
RPL17-206ENST00000579495 MYBBP1AQ9BQG0 1328 aaKnown RBP25.6■■□□□ 1.69
RPL17-206ENST00000579495 PCNTO95613 3336 aa25.6■■□□□ 1.69
RPL17-206ENST00000579495 WDR43Q15061 677 aaKnown RBP eCLIP25.59■■□□□ 1.69
RPL17-206ENST00000579495 SLC51AQ86UW1 340 aa25.59■■□□□ 1.69
RPL17-206ENST00000579495 PNMA8AQ86V59 439 aaPredicted RBP25.59■■□□□ 1.69
RPL17-206ENST00000579495 XAGE3Q8WTP9 111 aa25.59■■□□□ 1.69
RPL17-206ENST00000579495 TNS4Q8IZW8 715 aa25.58■■□□□ 1.69
RPL17-206ENST00000579495 PASKQ96RG2 1323 aa25.58■■□□□ 1.69
RPL17-206ENST00000579495 SNED1Q8TER0 1413 aa25.57■■□□□ 1.68
RPL17-206ENST00000579495 ITGBL1O95965 494 aaPredicted RBP25.57■■□□□ 1.68
RPL17-206ENST00000579495 KRT24Q2M2I5 525 aa25.57■■□□□ 1.68
RPL17-206ENST00000579495 HSP90AB3PQ58FF7 597 aa25.57■■□□□ 1.68
RPL17-206ENST00000579495 SLC10A5Q5PT55 438 aa25.57■■□□□ 1.68
RPL17-206ENST00000579495 TMEM88BA6NKF7 163 aa25.56■■□□□ 1.68
RPL17-206ENST00000579495 MAP1SQ66K74 1059 aaPredicted RBP25.56■■□□□ 1.68
RPL17-206ENST00000579495 RUNDC1Q96C34 613 aa25.56■■□□□ 1.68
RPL17-206ENST00000579495 CAPN15O75808 1086 aa25.55■■□□□ 1.68
RPL17-206ENST00000579495 LMOD1P29536 600 aaPredicted RBP25.55■■□□□ 1.68
RPL17-206ENST00000579495 CNTROBQ8N137 903 aa25.55■■□□□ 1.68
RPL17-206ENST00000579495 CHL1O00533 1208 aa25.54■■□□□ 1.68
RPL17-206ENST00000579495 PPIP5K2O43314 1243 aa25.54■■□□□ 1.68
RPL17-206ENST00000579495 HCLS1P14317 486 aaPredicted RBP25.54■■□□□ 1.68
RPL17-206ENST00000579495 NLRP10Q86W26 655 aa25.54■■□□□ 1.68
RPL17-206ENST00000579495 NIM1KQ8IY84 436 aa25.54■■□□□ 1.68
RPL17-206ENST00000579495 ZNF428Q96B54 188 aa25.54■■□□□ 1.68
RPL17-206ENST00000579495 DDX21Q9NR30 783 aaKnown RBP eCLIP25.54■■□□□ 1.68
RPL17-206ENST00000579495 TRMT112Q9UI30 125 aaKnown RBP25.54■■□□□ 1.68
RPL17-206ENST00000579495 TCIRG1Q13488 830 aa25.53■■□□□ 1.68
RPL17-206ENST00000579495 ADAMTS8Q9UP79 889 aa25.53■■□□□ 1.68
RPL17-206ENST00000579495 TRIM35Q9UPQ4 493 aa25.53■■□□□ 1.68
RPL17-206ENST00000579495 ATP6V0A2Q9Y487 856 aa25.53■■□□□ 1.68
RPL17-206ENST00000579495 ABCC4O15439 1325 aa25.53■■□□□ 1.68
RPL17-206ENST00000579495 COL4A5P29400 1685 aa25.52■■□□□ 1.68
RPL17-206ENST00000579495 CNTNAP1P78357 1384 aa25.52■■□□□ 1.68
RPL17-206ENST00000579495 AOC3Q16853 763 aa25.51■■□□□ 1.67
RPL17-206ENST00000579495 CHPF2Q9P2E5 772 aa25.51■■□□□ 1.67
RPL17-206ENST00000579495 BBOX1O75936 387 aa25.5■■□□□ 1.67
RPL17-206ENST00000579495 EPS15P42566 896 aa25.5■■□□□ 1.67
RPL17-206ENST00000579495 HDGFL1Q5TGJ6 251 aa25.5■■□□□ 1.67
RPL17-206ENST00000579495 DDX46Q7L014 1031 aaKnown RBP25.5■■□□□ 1.67
RPL17-206ENST00000579495 SH3TC1Q8TE82 1336 aa25.49■■□□□ 1.67
RPL17-206ENST00000579495 VEGFBP49765 207 aa25.49■■□□□ 1.67
RPL17-206ENST00000579495 DPP8Q6V1X1 898 aaPredicted RBP25.49■■□□□ 1.67
RPL17-206ENST00000579495 SUPT20HQ8NEM7 779 aa25.49■■□□□ 1.67
RPL17-206ENST00000579495 SCNN1DP51172 638 aa25.48■■□□□ 1.67
RPL17-206ENST00000579495 SP8Q8IXZ3 490 aa25.47■■□□□ 1.67
RPL17-206ENST00000579495 MPNDQ8N594 471 aa25.47■■□□□ 1.67
RPL17-206ENST00000579495 VPS33BQ9H267 617 aa25.47■■□□□ 1.67
RPL17-206ENST00000579495 DEFB115Q30KQ5 88 aa25.46■■□□□ 1.67
RPL17-206ENST00000579495 ANKRD13DQ6ZTN6 518 aa25.46■■□□□ 1.67
RPL17-206ENST00000579495 ABT1Q9ULW3 272 aaKnown RBP25.46■■□□□ 1.67
RPL17-206ENST00000579495 ADAMTSL1Q8N6G6 1762 aa25.46■■□□□ 1.67
RPL17-206ENST00000579495 PLBD2Q8NHP8 589 aa25.45■■□□□ 1.66
RPL17-206ENST00000579495 DBF4Q9UBU7 674 aaPredicted RBP25.45■■□□□ 1.66
RPL17-206ENST00000579495 ZNRF3Q9ULT6 936 aa25.45■■□□□ 1.66
RPL17-206ENST00000579495 ATP5J2-PTCD1G3V325 749 aa25.44■■□□□ 1.66
RPL17-206ENST00000579495 CXCL9Q07325 125 aa25.44■■□□□ 1.66
RPL17-206ENST00000579495 GRAPQ13588 217 aa25.44■■□□□ 1.66
RPL17-206ENST00000579495 USP50Q70EL3 339 aaPredicted RBP25.44■■□□□ 1.66
RPL17-206ENST00000579495 GRAPLQ8TC17 118 aaPredicted RBP25.44■■□□□ 1.66
RPL17-206ENST00000579495 AIDAQ96BJ3 306 aa25.44■■□□□ 1.66
RPL17-206ENST00000579495 RTFDC1Q9BY42 306 aaPredicted RBP25.44■■□□□ 1.66
RPL17-206ENST00000579495 ANKRD36CQ5JPF3 1778 aa25.44■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms