RNA–Protein interactions for RNA: ENST00000577686.1

SMARCD2-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 394 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-205ENST00000577686 PASKQ96RG2 1323 aa18.7■□□□□ 0.58
SMARCD2-205ENST00000577686 KDM3BQ7LBC6 1761 aa18.69■□□□□ 0.58
SMARCD2-205ENST00000577686 FZD9O00144 591 aa18.69■□□□□ 0.58
SMARCD2-205ENST00000577686 NUTM1Q86Y26 1132 aa18.69■□□□□ 0.58
SMARCD2-205ENST00000577686 ABCC12Q96J65 1359 aa18.68■□□□□ 0.58
SMARCD2-205ENST00000577686 GPTP24298 496 aa18.68■□□□□ 0.58
SMARCD2-205ENST00000577686 HOXA10P31260 410 aaPredicted RBP18.68■□□□□ 0.58
SMARCD2-205ENST00000577686 CRAMP1Q96RY5 1269 aa18.68■□□□□ 0.58
SMARCD2-205ENST00000577686 ZBTB3Q9H5J0 574 aa18.68■□□□□ 0.58
SMARCD2-205ENST00000577686 TSPYL4Q9UJ04 414 aa18.68■□□□□ 0.58
SMARCD2-205ENST00000577686 PPEF1O14829 653 aaPredicted RBP18.67■□□□□ 0.58
SMARCD2-205ENST00000577686 GIGYF2Q6Y7W6 1299 aaKnown RBP18.67■□□□□ 0.58
SMARCD2-205ENST00000577686 LARGE2Q8N3Y3 721 aa18.67■□□□□ 0.58
SMARCD2-205ENST00000577686 PLEKHF1Q96S99 279 aa18.67■□□□□ 0.58
SMARCD2-205ENST00000577686 BABAM1Q9NWV8 329 aa18.67■□□□□ 0.58
SMARCD2-205ENST00000577686 RNF123Q5XPI4 1314 aa18.67■□□□□ 0.58
SMARCD2-205ENST00000577686 HSP90AB3PQ58FF7 597 aa18.66■□□□□ 0.58
SMARCD2-205ENST00000577686 OLFM4Q6UX06 510 aa18.66■□□□□ 0.58
SMARCD2-205ENST00000577686 TTLL7Q6ZT98 887 aa18.66■□□□□ 0.58
SMARCD2-205ENST00000577686 NLRP3Q96P20 1036 aa18.66■□□□□ 0.58
SMARCD2-205ENST00000577686 GJA3Q9Y6H8 435 aa18.66■□□□□ 0.58
SMARCD2-205ENST00000577686 NIM1KQ8IY84 436 aa18.65■□□□□ 0.58
SMARCD2-205ENST00000577686 CNTROBQ8N137 903 aa18.65■□□□□ 0.58
SMARCD2-205ENST00000577686 SUPT20HQ8NEM7 779 aa18.65■□□□□ 0.58
SMARCD2-205ENST00000577686 VPS33BQ9H267 617 aa18.65■□□□□ 0.58
SMARCD2-205ENST00000577686 CTCFP49711 727 aaPredicted RBP18.64■□□□□ 0.57
SMARCD2-205ENST00000577686 SUSD4Q5VX71 490 aa18.64■□□□□ 0.57
SMARCD2-205ENST00000577686 ZNF34Q8IZ26 560 aa18.64■□□□□ 0.57
SMARCD2-205ENST00000577686 THUMPD2Q9BTF0 503 aaKnown RBP18.64■□□□□ 0.57
SMARCD2-205ENST00000577686 UBN2Q6ZU65 1347 aa18.64■□□□□ 0.57
SMARCD2-205ENST00000577686 NTSR2O95665 410 aa18.63■□□□□ 0.57
SMARCD2-205ENST00000577686 ITGBL1O95965 494 aaPredicted RBP18.63■□□□□ 0.57
SMARCD2-205ENST00000577686 UTP14AQ9BVJ6 771 aaKnown RBP18.63■□□□□ 0.57
SMARCD2-205ENST00000577686 PRDM10Q9NQV6 1147 aa18.63■□□□□ 0.57
SMARCD2-205ENST00000577686 RIPK4P57078 832 aa18.62■□□□□ 0.57
SMARCD2-205ENST00000577686 RALBP1Q15311 655 aa18.62■□□□□ 0.57
SMARCD2-205ENST00000577686 ABT1Q9ULW3 272 aaKnown RBP18.62■□□□□ 0.57
SMARCD2-205ENST00000577686 SNED1Q8TER0 1413 aa18.62■□□□□ 0.57
SMARCD2-205ENST00000577686 DLG5Q8TDM6 1919 aa18.61■□□□□ 0.57
SMARCD2-205ENST00000577686 NUP98P52948 1817 aa18.61■□□□□ 0.57
SMARCD2-205ENST00000577686 PPIP5K2O43314 1243 aa18.61■□□□□ 0.57
SMARCD2-205ENST00000577686 EIF2S2P20042 333 aaKnown RBP18.61■□□□□ 0.57
SMARCD2-205ENST00000577686 DEFB115Q30KQ5 88 aa18.61■□□□□ 0.57
SMARCD2-205ENST00000577686 MAP1SQ66K74 1059 aaPredicted RBP18.61■□□□□ 0.57
SMARCD2-205ENST00000577686 USP50Q70EL3 339 aaPredicted RBP18.61■□□□□ 0.57
SMARCD2-205ENST00000577686 RASSF10A6NK89 507 aa18.6■□□□□ 0.57
SMARCD2-205ENST00000577686 VEGFBP49765 207 aa18.6■□□□□ 0.57
SMARCD2-205ENST00000577686 MAP2K1Q02750 393 aaPredicted RBP18.6■□□□□ 0.57
SMARCD2-205ENST00000577686 ATP6V0A2Q9Y487 856 aa18.6■□□□□ 0.57
SMARCD2-205ENST00000577686 ADAMTSL1Q8N6G6 1762 aa18.6■□□□□ 0.57
SMARCD2-205ENST00000577686 TCERG1O14776 1098 aaKnown RBP18.59■□□□□ 0.57
SMARCD2-205ENST00000577686 FOXN1O15353 648 aa18.59■□□□□ 0.57
SMARCD2-205ENST00000577686 ECE1P42892 770 aa18.59■□□□□ 0.57
SMARCD2-205ENST00000577686 BBOX1O75936 387 aa18.58■□□□□ 0.56
SMARCD2-205ENST00000577686 SLC10A5Q5PT55 438 aa18.58■□□□□ 0.56
SMARCD2-205ENST00000577686 DDX46Q7L014 1031 aaKnown RBP18.58■□□□□ 0.56
SMARCD2-205ENST00000577686 BEGAINQ9BUH8 593 aa18.58■□□□□ 0.56
SMARCD2-205ENST00000577686 DDX21Q9NR30 783 aaKnown RBP eCLIP18.58■□□□□ 0.56
SMARCD2-205ENST00000577686 DPP8Q6V1X1 898 aaPredicted RBP18.57■□□□□ 0.56
SMARCD2-205ENST00000577686 PAXIP1Q6ZW49 1069 aaPredicted RBP18.57■□□□□ 0.56
SMARCD2-205ENST00000577686 TMC4Q7Z404 712 aa18.57■□□□□ 0.56
SMARCD2-205ENST00000577686 ADARB2Q9NS39 739 aaKnown RBP18.57■□□□□ 0.56
SMARCD2-205ENST00000577686 CDHR2Q9BYE9 1310 aa18.56■□□□□ 0.56
SMARCD2-205ENST00000577686 SCNN1DP51172 638 aa18.56■□□□□ 0.56
SMARCD2-205ENST00000577686 WBP1LQ9NX94 342 aa18.56■□□□□ 0.56
SMARCD2-205ENST00000577686 ZNRF3Q9ULT6 936 aa18.56■□□□□ 0.56
SMARCD2-205ENST00000577686 ABCC4O15439 1325 aa18.55■□□□□ 0.56
SMARCD2-205ENST00000577686 SH3TC1Q8TE82 1336 aa18.55■□□□□ 0.56
SMARCD2-205ENST00000577686 WDR33Q9C0J8 1336 aaKnown RBP18.55■□□□□ 0.56
SMARCD2-205ENST00000577686 TMPOP42166 694 aaKnown RBP18.55■□□□□ 0.56
SMARCD2-205ENST00000577686 AIMP1Q12904 312 aaKnown RBP18.55■□□□□ 0.56
SMARCD2-205ENST00000577686 AOC3Q16853 763 aa18.55■□□□□ 0.56
SMARCD2-205ENST00000577686 SP8Q8IXZ3 490 aa18.55■□□□□ 0.56
SMARCD2-205ENST00000577686 MPNDQ8N594 471 aa18.55■□□□□ 0.56
SMARCD2-205ENST00000577686 TRMT112Q9UI30 125 aaKnown RBP18.55■□□□□ 0.56
SMARCD2-205ENST00000577686 EPS15P42566 896 aa18.54■□□□□ 0.56
SMARCD2-205ENST00000577686 TNIP1Q15025 636 aa18.54■□□□□ 0.56
SMARCD2-205ENST00000577686 WDR43Q15061 677 aaKnown RBP eCLIP18.54■□□□□ 0.56
SMARCD2-205ENST00000577686 PDIA6Q15084 440 aa18.54■□□□□ 0.56
SMARCD2-205ENST00000577686 COPS6Q7L5N1 327 aa18.54■□□□□ 0.56
SMARCD2-205ENST00000577686 RTFDC1Q9BY42 306 aaPredicted RBP18.54■□□□□ 0.56
SMARCD2-205ENST00000577686 TCIRG1Q13488 830 aa18.53■□□□□ 0.56
SMARCD2-205ENST00000577686 LRP10Q7Z4F1 713 aa18.53■□□□□ 0.56
SMARCD2-205ENST00000577686 NLRP10Q86W26 655 aa18.53■□□□□ 0.56
SMARCD2-205ENST00000577686 XAGE3Q8WTP9 111 aa18.53■□□□□ 0.56
SMARCD2-205ENST00000577686 BCL2L13Q9BXK5 485 aa18.53■□□□□ 0.56
SMARCD2-205ENST00000577686 GPRC5DQ9NZD1 345 aa18.53■□□□□ 0.56
SMARCD2-205ENST00000577686 HOXB7P09629 217 aa18.52■□□□□ 0.56
SMARCD2-205ENST00000577686 GRAPQ13588 217 aa18.52■□□□□ 0.56
SMARCD2-205ENST00000577686 CIAPIN1Q6FI81 312 aa18.52■□□□□ 0.56
SMARCD2-205ENST00000577686 C3orf67Q6ZVT6 689 aa18.52■□□□□ 0.56
SMARCD2-205ENST00000577686 GRAPLQ8TC17 118 aaPredicted RBP18.52■□□□□ 0.56
SMARCD2-205ENST00000577686 MYBBP1AQ9BQG0 1328 aaKnown RBP18.51■□□□□ 0.55
SMARCD2-205ENST00000577686 COL4A5P29400 1685 aa18.51■□□□□ 0.55
SMARCD2-205ENST00000577686 ANXA1P04083 346 aa18.51■□□□□ 0.55
SMARCD2-205ENST00000577686 LBX1P52954 281 aa18.51■□□□□ 0.55
SMARCD2-205ENST00000577686 KIAA2012Q0VF49 1180 aa18.51■□□□□ 0.55
SMARCD2-205ENST00000577686 PROSER3Q2NL68 480 aa18.51■□□□□ 0.55
SMARCD2-205ENST00000577686 NECTIN2Q92692 538 aa18.51■□□□□ 0.55
SMARCD2-205ENST00000577686 HCLS1P14317 486 aaPredicted RBP18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms