RNA–Protein interactions for RNA: ENST00000577228.1

CDH8-202, Transcript of cadherin 8, humanhuman

TSL 4

Gene CDH8, Length 539 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-202ENST00000577228 NUP98P52948 1817 aa15.59■□□□□ 0.09
CDH8-202ENST00000577228 TMEM88BA6NKF7 163 aa15.59■□□□□ 0.09
CDH8-202ENST00000577228 ITGBL1O95965 494 aaPredicted RBP15.59■□□□□ 0.09
CDH8-202ENST00000577228 PNMA8AQ86V59 439 aaPredicted RBP15.59■□□□□ 0.09
CDH8-202ENST00000577228 GPC2Q8N158 579 aa15.59■□□□□ 0.09
CDH8-202ENST00000577228 PNNQ9H307 717 aaKnown RBP15.59■□□□□ 0.09
CDH8-202ENST00000577228 UBN2Q6ZU65 1347 aa15.59■□□□□ 0.09
CDH8-202ENST00000577228 HOXA10P31260 410 aaPredicted RBP15.58■□□□□ 0.08
CDH8-202ENST00000577228 SUSD4Q5VX71 490 aa15.58■□□□□ 0.08
CDH8-202ENST00000577228 ERBB4Q15303 1308 aa15.58■□□□□ 0.08
CDH8-202ENST00000577228 ADAMTSL1Q8N6G6 1762 aa15.57■□□□□ 0.08
CDH8-202ENST00000577228 PCNTO95613 3336 aa15.57■□□□□ 0.08
CDH8-202ENST00000577228 EIF6P56537 245 aaKnown RBP15.57■□□□□ 0.08
CDH8-202ENST00000577228 GRIPAP1Q4V328 841 aa15.57■□□□□ 0.08
CDH8-202ENST00000577228 ZNF34Q8IZ26 560 aa15.57■□□□□ 0.08
CDH8-202ENST00000577228 RBM17Q96I25 401 aaKnown RBP15.57■□□□□ 0.08
CDH8-202ENST00000577228 NTSR2O95665 410 aa15.56■□□□□ 0.08
CDH8-202ENST00000577228 MAP1SQ66K74 1059 aaPredicted RBP15.56■□□□□ 0.08
CDH8-202ENST00000577228 GIGYF2Q6Y7W6 1299 aaKnown RBP15.56■□□□□ 0.08
CDH8-202ENST00000577228 CRAMP1Q96RY5 1269 aa15.56■□□□□ 0.08
CDH8-202ENST00000577228 TSPYL4Q9UJ04 414 aa15.56■□□□□ 0.08
CDH8-202ENST00000577228 GJA3Q9Y6H8 435 aa15.56■□□□□ 0.08
CDH8-202ENST00000577228 COL4A5P29400 1685 aa15.55■□□□□ 0.08
CDH8-202ENST00000577228 PPEF1O14829 653 aaPredicted RBP15.55■□□□□ 0.08
CDH8-202ENST00000577228 FOXN1O15353 648 aa15.55■□□□□ 0.08
CDH8-202ENST00000577228 LMOD1P29536 600 aaPredicted RBP15.55■□□□□ 0.08
CDH8-202ENST00000577228 VEGFBP49765 207 aa15.55■□□□□ 0.08
CDH8-202ENST00000577228 PARP10Q53GL7 1025 aa15.55■□□□□ 0.08
CDH8-202ENST00000577228 PPP1R42Q7Z4L9 355 aa15.55■□□□□ 0.08
CDH8-202ENST00000577228 CNTROBQ8N137 903 aa15.55■□□□□ 0.08
CDH8-202ENST00000577228 LARGE2Q8N3Y3 721 aa15.55■□□□□ 0.08
CDH8-202ENST00000577228 AIDAQ96BJ3 306 aa15.55■□□□□ 0.08
CDH8-202ENST00000577228 TCERG1O14776 1098 aaKnown RBP15.54■□□□□ 0.08
CDH8-202ENST00000577228 C3orf67Q6ZVT6 689 aa15.54■□□□□ 0.08
CDH8-202ENST00000577228 EIF2S2P20042 333 aaKnown RBP15.53■□□□□ 0.08
CDH8-202ENST00000577228 SLC51AQ86UW1 340 aa15.53■□□□□ 0.08
CDH8-202ENST00000577228 NIM1KQ8IY84 436 aa15.53■□□□□ 0.08
CDH8-202ENST00000577228 NLRP3Q96P20 1036 aa15.53■□□□□ 0.08
CDH8-202ENST00000577228 TMX4Q9H1E5 349 aaPredicted RBP15.53■□□□□ 0.08
CDH8-202ENST00000577228 CTCFP49711 727 aaPredicted RBP15.52■□□□□ 0.08
CDH8-202ENST00000577228 RIPK4P57078 832 aa15.52■□□□□ 0.08
CDH8-202ENST00000577228 PDIA6Q15084 440 aa15.52■□□□□ 0.08
CDH8-202ENST00000577228 LRP10Q7Z4F1 713 aa15.52■□□□□ 0.08
CDH8-202ENST00000577228 UTP14AQ9BVJ6 771 aaKnown RBP15.52■□□□□ 0.08
CDH8-202ENST00000577228 PRDM10Q9NQV6 1147 aa15.52■□□□□ 0.08
CDH8-202ENST00000577228 ABT1Q9ULW3 272 aaKnown RBP15.52■□□□□ 0.08
CDH8-202ENST00000577228 RASSF10A6NK89 507 aa15.51■□□□□ 0.07
CDH8-202ENST00000577228 PPIP5K2O43314 1243 aa15.51■□□□□ 0.07
CDH8-202ENST00000577228 EPS15P42566 896 aa15.51■□□□□ 0.07
CDH8-202ENST00000577228 SCNN1DP51172 638 aa15.51■□□□□ 0.07
CDH8-202ENST00000577228 PROSER3Q2NL68 480 aa15.51■□□□□ 0.07
CDH8-202ENST00000577228 DEFB115Q30KQ5 88 aa15.51■□□□□ 0.07
CDH8-202ENST00000577228 LTBP1Q14766 1721 aa15.51■□□□□ 0.07
CDH8-202ENST00000577228 ANXA1P04083 346 aa15.5■□□□□ 0.07
CDH8-202ENST00000577228 LMOD3Q0VAK6 560 aa15.5■□□□□ 0.07
CDH8-202ENST00000577228 SLC10A5Q5PT55 438 aa15.5■□□□□ 0.07
CDH8-202ENST00000577228 DDX21Q9NR30 783 aaKnown RBP eCLIP15.5■□□□□ 0.07
CDH8-202ENST00000577228 BABAM1Q9NWV8 329 aa15.5■□□□□ 0.07
CDH8-202ENST00000577228 WBP1LQ9NX94 342 aa15.5■□□□□ 0.07
CDH8-202ENST00000577228 ATP6V0A2Q9Y487 856 aa15.5■□□□□ 0.07
CDH8-202ENST00000577228 ABCC4O15439 1325 aa15.49■□□□□ 0.07
CDH8-202ENST00000577228 AOC3Q16853 763 aa15.49■□□□□ 0.07
CDH8-202ENST00000577228 HSP90AB3PQ58FF7 597 aa15.49■□□□□ 0.07
CDH8-202ENST00000577228 SUPT20HQ8NEM7 779 aa15.49■□□□□ 0.07
CDH8-202ENST00000577228 TMPOP42166 694 aaKnown RBP15.48■□□□□ 0.07
CDH8-202ENST00000577228 AIMP1Q12904 312 aaKnown RBP15.48■□□□□ 0.07
CDH8-202ENST00000577228 USP50Q70EL3 339 aaPredicted RBP15.48■□□□□ 0.07
CDH8-202ENST00000577228 NECTIN2Q92692 538 aa15.48■□□□□ 0.07
CDH8-202ENST00000577228 VPS33BQ9H267 617 aa15.48■□□□□ 0.07
CDH8-202ENST00000577228 WDR33Q9C0J8 1336 aaKnown RBP15.47■□□□□ 0.07
CDH8-202ENST00000577228 RALBP1Q15311 655 aa15.47■□□□□ 0.07
CDH8-202ENST00000577228 COPS6Q7L5N1 327 aa15.47■□□□□ 0.07
CDH8-202ENST00000577228 NLRP10Q86W26 655 aa15.47■□□□□ 0.07
CDH8-202ENST00000577228 XAGE3Q8WTP9 111 aa15.47■□□□□ 0.07
CDH8-202ENST00000577228 RTFDC1Q9BY42 306 aaPredicted RBP15.47■□□□□ 0.07
CDH8-202ENST00000577228 ZNRF3Q9ULT6 936 aa15.47■□□□□ 0.07
CDH8-202ENST00000577228 BBOX1O75936 387 aa15.46■□□□□ 0.07
CDH8-202ENST00000577228 HCLS1P14317 486 aaPredicted RBP15.46■□□□□ 0.07
CDH8-202ENST00000577228 LBX1P52954 281 aa15.46■□□□□ 0.07
CDH8-202ENST00000577228 MAP2K1Q02750 393 aaPredicted RBP15.46■□□□□ 0.07
CDH8-202ENST00000577228 FMR1Q06787 632 aaKnown RBP eCLIP15.46■□□□□ 0.07
CDH8-202ENST00000577228 DPP8Q6V1X1 898 aaPredicted RBP15.46■□□□□ 0.07
CDH8-202ENST00000577228 PAXIP1Q6ZW49 1069 aaPredicted RBP15.46■□□□□ 0.07
CDH8-202ENST00000577228 ADARB2Q9NS39 739 aaKnown RBP15.46■□□□□ 0.07
CDH8-202ENST00000577228 GPRC5DQ9NZD1 345 aa15.46■□□□□ 0.07
CDH8-202ENST00000577228 ANKRD36CQ5JPF3 1778 aa15.46■□□□□ 0.07
CDH8-202ENST00000577228 TRAF5O00463 557 aa15.45■□□□□ 0.06
CDH8-202ENST00000577228 CXCL9Q07325 125 aa15.45■□□□□ 0.06
CDH8-202ENST00000577228 TCIRG1Q13488 830 aa15.45■□□□□ 0.06
CDH8-202ENST00000577228 DDX46Q7L014 1031 aaKnown RBP15.45■□□□□ 0.06
CDH8-202ENST00000577228 SP8Q8IXZ3 490 aa15.45■□□□□ 0.06
CDH8-202ENST00000577228 MPNDQ8N594 471 aa15.45■□□□□ 0.06
CDH8-202ENST00000577228 TRMT112Q9UI30 125 aaKnown RBP15.45■□□□□ 0.06
CDH8-202ENST00000577228 SH3TC1Q8TE82 1336 aa15.44■□□□□ 0.06
CDH8-202ENST00000577228 HSPA8P11142 646 aaKnown RBP15.44■□□□□ 0.06
CDH8-202ENST00000577228 ECE1P42892 770 aa15.44■□□□□ 0.06
CDH8-202ENST00000577228 GMPSP49915 693 aaPredicted RBP15.44■□□□□ 0.06
CDH8-202ENST00000577228 KIAA2012Q0VF49 1180 aa15.44■□□□□ 0.06
CDH8-202ENST00000577228 GRAPQ13588 217 aa15.44■□□□□ 0.06
CDH8-202ENST00000577228 NEUROD2Q15784 382 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms