RNA–Protein interactions for RNA: ENST00000575113.1

RFWD3-208, Transcript of ring finger and WD repeat domain 3, humanhuman

TSL 3

Gene RFWD3, Length 706 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3-208ENST00000575113 RUNDC1Q96C34 613 aa28.22■■■□□ 2.11
RFWD3-208ENST00000575113 LAS1LQ9Y4W2 734 aaKnown RBP28.22■■■□□ 2.11
RFWD3-208ENST00000575113 NUP98P52948 1817 aa28.21■■■□□ 2.11
RFWD3-208ENST00000575113 HOXA10P31260 410 aaPredicted RBP28.21■■■□□ 2.11
RFWD3-208ENST00000575113 PROSER3Q2NL68 480 aa28.21■■■□□ 2.11
RFWD3-208ENST00000575113 L3MBTL3Q96JM7 780 aaPredicted RBP28.21■■■□□ 2.11
RFWD3-208ENST00000575113 ZNF541Q9H0D2 1346 aa28.2■■■□□ 2.11
RFWD3-208ENST00000575113 LRP10Q7Z4F1 713 aa28.2■■■□□ 2.1
RFWD3-208ENST00000575113 JDP2Q8WYK2 163 aa28.2■■■□□ 2.1
RFWD3-208ENST00000575113 PSMD1Q99460 953 aa28.2■■■□□ 2.1
RFWD3-208ENST00000575113 UTP14AQ9BVJ6 771 aaKnown RBP28.2■■■□□ 2.1
RFWD3-208ENST00000575113 POTEIP0CG38 1075 aa28.19■■■□□ 2.1
RFWD3-208ENST00000575113 POTEJP0CG39 1038 aa28.19■■■□□ 2.1
RFWD3-208ENST00000575113 AIMP1Q12904 312 aaKnown RBP28.19■■■□□ 2.1
RFWD3-208ENST00000575113 NLRP3Q96P20 1036 aa28.19■■■□□ 2.1
RFWD3-208ENST00000575113 CRAMP1Q96RY5 1269 aa28.19■■■□□ 2.1
RFWD3-208ENST00000575113 GRIPAP1Q4V328 841 aa28.18■■■□□ 2.1
RFWD3-208ENST00000575113 COPS6Q7L5N1 327 aa28.18■■■□□ 2.1
RFWD3-208ENST00000575113 TMX4Q9H1E5 349 aaPredicted RBP28.18■■■□□ 2.1
RFWD3-208ENST00000575113 TAF1DQ9H5J8 278 aaPredicted RBP28.18■■■□□ 2.1
RFWD3-208ENST00000575113 CHL1O00533 1208 aa28.17■■■□□ 2.1
RFWD3-208ENST00000575113 TCERG1O14776 1098 aaKnown RBP28.17■■■□□ 2.1
RFWD3-208ENST00000575113 PPEF1O14829 653 aaPredicted RBP28.17■■■□□ 2.1
RFWD3-208ENST00000575113 HSP90AB3PQ58FF7 597 aa28.17■■■□□ 2.1
RFWD3-208ENST00000575113 LDHDQ86WU2 507 aa28.17■■■□□ 2.1
RFWD3-208ENST00000575113 XAGE3Q8WTP9 111 aa28.17■■■□□ 2.1
RFWD3-208ENST00000575113 EAPPQ56P03 285 aaPredicted RBP28.16■■■□□ 2.1
RFWD3-208ENST00000575113 HACL1Q9UJ83 578 aa28.16■■■□□ 2.1
RFWD3-208ENST00000575113 ADAMTS8Q9UP79 889 aa28.16■■■□□ 2.1
RFWD3-208ENST00000575113 FZD9O00144 591 aa28.15■■■□□ 2.1
RFWD3-208ENST00000575113 DDX21Q9NR30 783 aaKnown RBP eCLIP28.15■■■□□ 2.1
RFWD3-208ENST00000575113 TRIM35Q9UPQ4 493 aa28.15■■■□□ 2.1
RFWD3-208ENST00000575113 KRT24Q2M2I5 525 aa28.14■■■□□ 2.1
RFWD3-208ENST00000575113 C3orf67Q6ZVT6 689 aa28.14■■■□□ 2.1
RFWD3-208ENST00000575113 EIF6P56537 245 aaKnown RBP28.13■■■□□ 2.09
RFWD3-208ENST00000575113 GPC2Q8N158 579 aa28.13■■■□□ 2.09
RFWD3-208ENST00000575113 CLEC11AQ9Y240 323 aa28.13■■■□□ 2.09
RFWD3-208ENST00000575113 RNF123Q5XPI4 1314 aa28.13■■■□□ 2.09
RFWD3-208ENST00000575113 SLC10A5Q5PT55 438 aa28.12■■■□□ 2.09
RFWD3-208ENST00000575113 LARGE2Q8N3Y3 721 aa28.12■■■□□ 2.09
RFWD3-208ENST00000575113 CREBZFQ9NS37 354 aa28.12■■■□□ 2.09
RFWD3-208ENST00000575113 SNED1Q8TER0 1413 aa28.11■■■□□ 2.09
RFWD3-208ENST00000575113 EPHX2P34913 555 aa28.11■■■□□ 2.09
RFWD3-208ENST00000575113 HDGFL1Q5TGJ6 251 aa28.11■■■□□ 2.09
RFWD3-208ENST00000575113 NLRP10Q86W26 655 aa28.11■■■□□ 2.09
RFWD3-208ENST00000575113 GJA3Q9Y6H8 435 aa28.11■■■□□ 2.09
RFWD3-208ENST00000575113 TCIRG1Q13488 830 aa28.1■■■□□ 2.09
RFWD3-208ENST00000575113 PNMA8AQ86V59 439 aaPredicted RBP28.1■■■□□ 2.09
RFWD3-208ENST00000575113 CHPF2Q9P2E5 772 aa28.1■■■□□ 2.09
RFWD3-208ENST00000575113 TRMT112Q9UI30 125 aaKnown RBP28.1■■■□□ 2.09
RFWD3-208ENST00000575113 PRKRIP1Q9H875 184 aaPredicted RBP28.09■■■□□ 2.09
RFWD3-208ENST00000575113 SCN4AP35499 1836 aa28.08■■■□□ 2.09
RFWD3-208ENST00000575113 HOXB7P09629 217 aa28.08■■■□□ 2.09
RFWD3-208ENST00000575113 HCLS1P14317 486 aaPredicted RBP28.08■■■□□ 2.09
RFWD3-208ENST00000575113 ATP6V0A2Q9Y487 856 aa28.08■■■□□ 2.09
RFWD3-208ENST00000575113 LMOD1P29536 600 aaPredicted RBP28.07■■■□□ 2.08
RFWD3-208ENST00000575113 NIM1KQ8IY84 436 aa28.07■■■□□ 2.08
RFWD3-208ENST00000575113 CFAP44Q96MT7 982 aa28.07■■■□□ 2.08
RFWD3-208ENST00000575113 SLC51AQ86UW1 340 aa28.06■■■□□ 2.08
RFWD3-208ENST00000575113 DBF4Q9UBU7 674 aaPredicted RBP28.06■■■□□ 2.08
RFWD3-208ENST00000575113 MKRN1Q9UHC7 482 aaKnown RBP28.06■■■□□ 2.08
RFWD3-208ENST00000575113 ABCC4O15439 1325 aa28.06■■■□□ 2.08
RFWD3-208ENST00000575113 SH3TC1Q8TE82 1336 aa28.06■■■□□ 2.08
RFWD3-208ENST00000575113 PPIP5K2O43314 1243 aa28.05■■■□□ 2.08
RFWD3-208ENST00000575113 DDX46Q7L014 1031 aaKnown RBP28.05■■■□□ 2.08
RFWD3-208ENST00000575113 PLBD2Q8NHP8 589 aa28.05■■■□□ 2.08
RFWD3-208ENST00000575113 PASKQ96RG2 1323 aa28.04■■■□□ 2.08
RFWD3-208ENST00000575113 BBOX1O75936 387 aa28.04■■■□□ 2.08
RFWD3-208ENST00000575113 HSPA1AP0DMV8 641 aaKnown RBP28.04■■■□□ 2.08
RFWD3-208ENST00000575113 HSPA1BP0DMV9 641 aaKnown RBP28.04■■■□□ 2.08
RFWD3-208ENST00000575113 DUSP27Q5VZP5 1158 aa28.04■■■□□ 2.08
RFWD3-208ENST00000575113 ANKRD13DQ6ZTN6 518 aa28.04■■■□□ 2.08
RFWD3-208ENST00000575113 SUPT20HQ8NEM7 779 aa28.04■■■□□ 2.08
RFWD3-208ENST00000575113 AOC3Q16853 763 aa28.02■■■□□ 2.08
RFWD3-208ENST00000575113 COL13A1Q5TAT6 717 aaPredicted RBP28.02■■■□□ 2.08
RFWD3-208ENST00000575113 DPP8Q6V1X1 898 aaPredicted RBP28.02■■■□□ 2.08
RFWD3-208ENST00000575113 ZNF428Q96B54 188 aa28.02■■■□□ 2.08
RFWD3-208ENST00000575113 VPS33BQ9H267 617 aa28.02■■■□□ 2.08
RFWD3-208ENST00000575113 MBIPQ9NS73 344 aa28.02■■■□□ 2.08
RFWD3-208ENST00000575113 HYPKQ9NX55 129 aa28.02■■■□□ 2.08
RFWD3-208ENST00000575113 COL4A5P29400 1685 aa28.01■■■□□ 2.07
RFWD3-208ENST00000575113 TMEM88BA6NKF7 163 aa28.01■■■□□ 2.07
RFWD3-208ENST00000575113 APAF1O14727 1248 aa28.01■■■□□ 2.07
RFWD3-208ENST00000575113 ITGBL1O95965 494 aaPredicted RBP28.01■■■□□ 2.07
RFWD3-208ENST00000575113 CALD1Q05682 793 aaKnown RBP28.01■■■□□ 2.07
RFWD3-208ENST00000575113 CNTROBQ8N137 903 aa28.01■■■□□ 2.07
RFWD3-208ENST00000575113 MAP1SQ66K74 1059 aaPredicted RBP28■■■□□ 2.07
RFWD3-208ENST00000575113 SP8Q8IXZ3 490 aa28■■■□□ 2.07
RFWD3-208ENST00000575113 MPNDQ8N594 471 aa28■■■□□ 2.07
RFWD3-208ENST00000575113 GRAPQ13588 217 aa27.99■■■□□ 2.07
RFWD3-208ENST00000575113 GRAPLQ8TC17 118 aaPredicted RBP27.99■■■□□ 2.07
RFWD3-208ENST00000575113 ANKRD36CQ5JPF3 1778 aa27.99■■■□□ 2.07
RFWD3-208ENST00000575113 ATP5J2-PTCD1G3V325 749 aa27.98■■■□□ 2.07
RFWD3-208ENST00000575113 CNTNAP1P78357 1384 aa27.98■■■□□ 2.07
RFWD3-208ENST00000575113 EPS15P42566 896 aa27.97■■■□□ 2.07
RFWD3-208ENST00000575113 SCNN1DP51172 638 aa27.97■■■□□ 2.07
RFWD3-208ENST00000575113 GNAI1P63096 354 aa27.97■■■□□ 2.07
RFWD3-208ENST00000575113 RTFDC1Q9BY42 306 aaPredicted RBP27.97■■■□□ 2.07
RFWD3-208ENST00000575113 IFT57Q9NWB7 429 aa27.97■■■□□ 2.07
RFWD3-208ENST00000575113 FAM89AQ96GI7 184 aa27.96■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms