RNA–Protein interactions for RNA: ENST00000572824.1

NPLOC4-210, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-210ENST00000572824 C1orf141Q5JVX7 400 aa12.55□□□□□ -0.4
NPLOC4-210ENST00000572824 PADI6Q6TGC4 694 aa12.55□□□□□ -0.4
NPLOC4-210ENST00000572824 DNAJC10Q8IXB1 793 aa12.55□□□□□ -0.4
NPLOC4-210ENST00000572824 RBM27Q9P2N5 1060 aaKnown RBP12.55□□□□□ -0.4
NPLOC4-210ENST00000572824 ARFGEF1Q9Y6D6 1849 aa12.55□□□□□ -0.4
NPLOC4-210ENST00000572824 SENP3-EIF4A1A0A087X0R7 540 aa12.54□□□□□ -0.4
NPLOC4-210ENST00000572824 TRIM66O15016 1216 aa12.54□□□□□ -0.4
NPLOC4-210ENST00000572824 DDR1Q08345 913 aa12.54□□□□□ -0.4
NPLOC4-210ENST00000572824 MTHFSDQ2M296 383 aaKnown RBP12.54□□□□□ -0.4
NPLOC4-210ENST00000572824 TTC13Q8NBP0 860 aa12.54□□□□□ -0.4
NPLOC4-210ENST00000572824 CDCA7LQ96GN5 454 aa12.54□□□□□ -0.4
NPLOC4-210ENST00000572824 KCNK17Q96T54 332 aa12.54□□□□□ -0.4
NPLOC4-210ENST00000572824 RTCBQ9Y3I0 505 aaKnown RBP12.54□□□□□ -0.4
NPLOC4-210ENST00000572824 CEP350Q5VT06 3117 aa12.53□□□□□ -0.4
NPLOC4-210ENST00000572824 A0A0G2JLW4 131 aa12.53□□□□□ -0.4
NPLOC4-210ENST00000572824 RNMTO43148 476 aaKnown RBP12.53□□□□□ -0.4
NPLOC4-210ENST00000572824 HSP90AB1P08238 724 aaKnown RBP12.53□□□□□ -0.4
NPLOC4-210ENST00000572824 AMOTQ4VCS5 1084 aa12.53□□□□□ -0.4
NPLOC4-210ENST00000572824 TRAPPC3LQ5T215 181 aa12.53□□□□□ -0.4
NPLOC4-210ENST00000572824 INTS5Q6P9B9 1019 aaKnown RBP12.53□□□□□ -0.4
NPLOC4-210ENST00000572824 POTEEQ6S8J3 1075 aa12.53□□□□□ -0.4
NPLOC4-210ENST00000572824 ANKRD31Q8N7Z5 1873 aa12.53□□□□□ -0.4
NPLOC4-210ENST00000572824 POTEB3A0JP26 581 aa12.52□□□□□ -0.41
NPLOC4-210ENST00000572824 GIGYF1O75420 1035 aaPredicted RBP12.52□□□□□ -0.41
NPLOC4-210ENST00000572824 RPS6KA4O75676 772 aa12.52□□□□□ -0.41
NPLOC4-210ENST00000572824 POTEBQ6S5H4 581 aa12.52□□□□□ -0.41
NPLOC4-210ENST00000572824 ZNF687Q8N1G0 1237 aa12.52□□□□□ -0.41
NPLOC4-210ENST00000572824 SLC52A2Q9HAB3 445 aa12.52□□□□□ -0.41
NPLOC4-210ENST00000572824 SCN7AQ01118 1682 aa12.51□□□□□ -0.41
NPLOC4-210ENST00000572824 COL11A2P13942 1736 aaPredicted RBP12.51□□□□□ -0.41
NPLOC4-210ENST00000572824 NRXN2Q9P2S2 1712 aa12.51□□□□□ -0.41
NPLOC4-210ENST00000572824 DLEC1Q9Y238 1755 aa12.51□□□□□ -0.41
NPLOC4-210ENST00000572824 SBF1O95248 1867 aa12.51□□□□□ -0.41
NPLOC4-210ENST00000572824 CACNA1SQ13698 1873 aa12.51□□□□□ -0.41
NPLOC4-210ENST00000572824 GRIN3BO60391 1043 aa12.51□□□□□ -0.41
NPLOC4-210ENST00000572824 DPEP1P16444 411 aa12.51□□□□□ -0.41
NPLOC4-210ENST00000572824 BRPF1P55201 1214 aaPredicted RBP12.51□□□□□ -0.41
NPLOC4-210ENST00000572824 AKAP4Q5JQC9 854 aa12.51□□□□□ -0.41
NPLOC4-210ENST00000572824 HS3ST6Q96QI5 342 aa12.51□□□□□ -0.41
NPLOC4-210ENST00000572824 ZBTB1Q9Y2K1 713 aa12.51□□□□□ -0.41
NPLOC4-210ENST00000572824 USP42Q9H9J4 1324 aaKnown RBP12.51□□□□□ -0.41
NPLOC4-210ENST00000572824 ARHGAP33O14559 1287 aa12.5□□□□□ -0.41
NPLOC4-210ENST00000572824 DIAPH1O60610 1272 aaKnown RBP12.5□□□□□ -0.41
NPLOC4-210ENST00000572824 PSEN2P49810 448 aa12.5□□□□□ -0.41
NPLOC4-210ENST00000572824 RC3H1Q5TC82 1133 aaKnown RBP12.5□□□□□ -0.41
NPLOC4-210ENST00000572824 FAM198AQ9UFP1 575 aa12.5□□□□□ -0.41
NPLOC4-210ENST00000572824 CARMIL3Q8ND23 1372 aa12.5□□□□□ -0.41
NPLOC4-210ENST00000572824 DLG5Q8TDM6 1919 aa12.5□□□□□ -0.41
NPLOC4-210ENST00000572824 SOS1Q07889 1333 aaPredicted RBP12.49□□□□□ -0.41
NPLOC4-210ENST00000572824 U2SURPO15042 1029 aaKnown RBP12.49□□□□□ -0.41
NPLOC4-210ENST00000572824 KCNA3P22001 575 aa12.49□□□□□ -0.41
NPLOC4-210ENST00000572824 CHRNA5P30532 468 aa12.49□□□□□ -0.41
NPLOC4-210ENST00000572824 RFC4P35249 363 aa12.49□□□□□ -0.41
NPLOC4-210ENST00000572824 BCS1LQ9Y276 419 aa12.49□□□□□ -0.41
NPLOC4-210ENST00000572824 CCDC88AQ3V6T2 1871 aa12.48□□□□□ -0.41
NPLOC4-210ENST00000572824 BCORQ6W2J9 1755 aa12.48□□□□□ -0.41
NPLOC4-210ENST00000572824 COL15A1P39059 1388 aa12.48□□□□□ -0.41
NPLOC4-210ENST00000572824 KCNQ3O43525 872 aa12.48□□□□□ -0.41
NPLOC4-210ENST00000572824 CYP19A1P11511 503 aaPredicted RBP12.48□□□□□ -0.41
NPLOC4-210ENST00000572824 PDE4DQ08499 809 aa12.48□□□□□ -0.41
NPLOC4-210ENST00000572824 NEUROD2Q15784 382 aa12.48□□□□□ -0.41
NPLOC4-210ENST00000572824 FAM161AQ3B820 660 aa12.48□□□□□ -0.41
NPLOC4-210ENST00000572824 USPL1Q5W0Q7 1092 aa12.48□□□□□ -0.41
NPLOC4-210ENST00000572824 PHACTR3Q96KR7 559 aa12.48□□□□□ -0.41
NPLOC4-210ENST00000572824 TSKSQ9UJT2 592 aa12.48□□□□□ -0.41
NPLOC4-210ENST00000572824 PBX2P40425 430 aa12.47□□□□□ -0.41
NPLOC4-210ENST00000572824 IL17REQ8NFR9 667 aa12.47□□□□□ -0.41
NPLOC4-210ENST00000572824 CCDC87Q9NVE4 849 aa12.47□□□□□ -0.41
NPLOC4-210ENST00000572824 ADGRG1Q9Y653 693 aa12.47□□□□□ -0.41
NPLOC4-210ENST00000572824 NPC1L1Q9UHC9 1359 aa12.46□□□□□ -0.41
NPLOC4-210ENST00000572824 TRIM6-TRIM34B2RNG4 842 aa12.46□□□□□ -0.41
NPLOC4-210ENST00000572824 POLRMTO00411 1230 aaKnown RBP12.46□□□□□ -0.41
NPLOC4-210ENST00000572824 PIP4K2AP48426 406 aaPredicted RBP12.46□□□□□ -0.41
NPLOC4-210ENST00000572824 AMHR2Q16671 573 aa12.46□□□□□ -0.41
NPLOC4-210ENST00000572824 NLGN1Q8N2Q7 840 aa12.46□□□□□ -0.41
NPLOC4-210ENST00000572824 ZBED2Q9BTP6 218 aa12.46□□□□□ -0.41
NPLOC4-210ENST00000572824 TIAM2Q8IVF5 1701 aa12.45□□□□□ -0.42
NPLOC4-210ENST00000572824 PRAMEF22A3QJZ6 481 aa12.45□□□□□ -0.42
NPLOC4-210ENST00000572824 OATP04181 439 aa12.45□□□□□ -0.42
NPLOC4-210ENST00000572824 PROX2Q3B8N5 592 aa12.45□□□□□ -0.42
NPLOC4-210ENST00000572824 CCDC24Q8N4L8 307 aa12.45□□□□□ -0.42
NPLOC4-210ENST00000572824 ZNF496Q96IT1 587 aaPredicted RBP12.45□□□□□ -0.42
NPLOC4-210ENST00000572824 PARP3Q9Y6F1 533 aa12.45□□□□□ -0.42
NPLOC4-210ENST00000572824 CANXP27824 592 aaKnown RBP12.44□□□□□ -0.42
NPLOC4-210ENST00000572824 PRKAR2BP31323 418 aa12.44□□□□□ -0.42
NPLOC4-210ENST00000572824 NFIXQ14938 502 aa12.44□□□□□ -0.42
NPLOC4-210ENST00000572824 DMRTA1Q5VZB9 504 aa12.44□□□□□ -0.42
NPLOC4-210ENST00000572824 RSPH6AQ9H0K4 717 aa12.44□□□□□ -0.42
NPLOC4-210ENST00000572824 GPBP1L1Q9HC44 474 aaPredicted RBP12.44□□□□□ -0.42
NPLOC4-210ENST00000572824 TM4SF1P30408 202 aa12.43□□□□□ -0.42
NPLOC4-210ENST00000572824 PRELPP51888 382 aa12.43□□□□□ -0.42
NPLOC4-210ENST00000572824 RASSF7Q02833 373 aa12.43□□□□□ -0.42
NPLOC4-210ENST00000572824 METTL3Q86U44 580 aaKnown RBP12.43□□□□□ -0.42
NPLOC4-210ENST00000572824 PXYLP1Q8TE99 480 aa12.43□□□□□ -0.42
NPLOC4-210ENST00000572824 PHOX2BQ99453 314 aa12.43□□□□□ -0.42
NPLOC4-210ENST00000572824 PPP2R1AP30153 589 aa12.42□□□□□ -0.42
NPLOC4-210ENST00000572824 TGFB2P61812 414 aa12.42□□□□□ -0.42
NPLOC4-210ENST00000572824 DCTN1Q14203 1278 aa12.42□□□□□ -0.42
NPLOC4-210ENST00000572824 BICDL1Q6ZP65 573 aa12.42□□□□□ -0.42
NPLOC4-210ENST00000572824 ARHGAP27Q6ZUM4 889 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms